Commits · 83da4fa5a50c237ca093d6655c049f4e3ae3c76e · sispub / openbis

Dec 08, 2009
- LMS-1290 revert changes made since revision 13672 · b93c02a3
  felmer authored 15 years ago
  
  SVN: 13747
  b93c02a3
- SE-170 fix tests · 72f37b46
  felmer authored 15 years ago
  
  SVN: 13738
  72f37b46
Dec 04, 2009
- [LMS-1290] fix: avoid dead lock situation · fd23b548
  brinn authored 15 years ago
  
  SVN: 13696
  fd23b548
Dec 03, 2009
- [LMS-1290] fix: ensure we are using the protein query objects in a thread-safe... · d435d883
  brinn authored 15 years ago
  
  [LMS-1290] fix: ensure we are using the protein query objects in a thread-safe way by getting them from a pool and returning them afterwards SVN: 13694
  d435d883
- [LMS-1290] fix: test expectations · 023d6899
  brinn authored 15 years ago
  
  SVN: 13679
  023d6899
Nov 24, 2009
- SE-163 ProteinSummaryTableTest added · 4d83bd42
  felmer authored 15 years ago
  
  SVN: 13489
  4d83bd42
Nov 19, 2009
- SE-163 Protein coverage column with tests implemented. · 66c48a5b
  felmer authored 15 years ago
  
  SVN: 13445
  66c48a5b
Nov 16, 2009
- SE-163 more tests · 4411c817
  felmer authored 15 years ago
  
  SVN: 13427
  4411c817
- SE-163 · 9a004c9c
  felmer authored 15 years ago
  
  SVN: 13426
  9a004c9c
Nov 11, 2009

LMS-1247 YeastX/PhosphonetX: allow DSS to rollback transaction when... · 2727102c

tpylak authored 15 years ago

LMS-1247 	 YeastX/PhosphonetX: allow DSS to rollback transaction when registration of a dataset in openBIS failed

SVN: 13297

2727102c

Nov 03, 2009
- LMS-1249 wrong UserFailureException class replaced by the correct one · 3b1161bb
  felmer authored 15 years ago
  
  SVN: 13207
  3b1161bb
Oct 29, 2009
- add test · 1710ffe2
  felmer authored 15 years ago
  
  SVN: 13150
  1710ffe2
Oct 13, 2009
- SE-146 Schema validation for protXML files added · 5daf5201
  felmer authored 15 years ago
  
  SVN: 12909
  5daf5201
Oct 05, 2009
- SE-147 data set is either the protXML file or a folder which contains a *prot.xml file · 6c7d2dcf
  felmer authored 15 years ago
  
  SVN: 12845
  6c7d2dcf
Sep 09, 2009
- SE-137 bug in AccessionNumberBuilder found, tested and fixed · 01f804a3
  felmer authored 15 years ago
  
  SVN: 12532
  01f804a3
- SE-137 tests fixed · 95d9da4f
  felmer authored 15 years ago
  
  SVN: 12531
  95d9da4f
Sep 08, 2009
- SE-137 AggregateFunction: moved to shared.basic.dto, more functions added · 009ece18
  felmer authored 15 years ago
  
  SVN: 12523
  009ece18
- SE-137 test for different aggregation types · 570dbcca
  felmer authored 15 years ago
  
  SVN: 12522
  570dbcca
- SE-137 aggregate abundance columns · 847c8363
  felmer authored 15 years ago
  
  SVN: 12519
  847c8363
Sep 07, 2009
- SE-137 Refactoring and implementation of abundance column aggregation · 742df2b6
  felmer authored 15 years ago
  
  SVN: 12503
  742df2b6
- SE-137 Abundance columns sorted: Improve comparison, sorting moved to TreatmentFinder · 37fdb444
  felmer authored 15 years ago
  
  SVN: 12496
  37fdb444
- SE-137 Abundance columns sorted. · 4dc04ddf
  felmer authored 15 years ago
  
  SVN: 12495
  4dc04ddf
Sep 02, 2009
- refactor: replace PEs with DTOs in IETLLIMSService · 650e22e3
  brinn authored 15 years ago
  
  SVN: 12355
  650e22e3
Sep 01, 2009
- SE-127 SampleIDProviderTest added · efa32394
  felmer authored 15 years ago
  
  SVN: 12345
  efa32394
- SE-127 handle case when two MS_INJECTION samples have the same parent · 9dd87cfa
  felmer authored 15 years ago
  
  SVN: 12344
  9dd87cfa
- SE-127 ProteinWithAbundancesTableTest and AbundanceManagerTest added · e37ac3a3
  felmer authored 15 years ago
  
  SVN: 12340
  e37ac3a3
Aug 31, 2009
- SE-127 tests for AggregateFunction, PhosphoNetXServer, and TreatmentFinder added · 308c185e
  felmer authored 15 years ago
  
  SVN: 12327
  308c185e
- SE-126 Unit tests for AbundanceHandler · 02e0f86a
  felmer authored 15 years ago
  
  SVN: 12325
  02e0f86a
Aug 27, 2009
- SE-126, SE-127 renaming UnitProtID to Accession Number in Java code and database schema · 119b97fb
  felmer authored 15 years ago
  
  SVN: 12304
  119b97fb
- SE-126, SE-127 bugs fixed · b100896d
  felmer authored 15 years ago
  
  SVN: 12303
  b100896d
Aug 26, 2009
- SE-126 protXML file uploading: parameter name is either code of a sample or... · c14bb492
  felmer authored 15 years ago
  
  SE-126 protXML file uploading: parameter name is either code of a sample or value of property MZXML_FILENAME SVN: 12296
  c14bb492
Aug 25, 2009
- SE-126 broken test fixed · 2629f5c6
  felmer authored 15 years ago
  
  SVN: 12270
  2629f5c6
Aug 12, 2009
- SE-124 phosphonetx: fix unit tests · 39e47700
  tpylak authored 15 years ago
  
  SVN: 12077
  39e47700
- SE-124 phosphonetx: 1. fix the bug (there can be many sequences for one... · ac148f02
  tpylak authored 15 years ago
  
  SE-124 phosphonetx: 1. fix the bug (there can be many sequences for one protein references) 2. report all errors when uploading the prot.xml file, not only the first one SVN: 12075
  ac148f02
Aug 05, 2009

phosphonetx: clearer display of the protein sequence (separate the sequence... · ae7412bc

tpylak authored 15 years ago

phosphonetx: clearer display of the protein sequence (separate the sequence into equal lines of 60 characters, separate line into 10 characters blocks)

SVN: 12013

ae7412bc

Jul 17, 2009
- LMS-1028 break sequence into many shorter lines, mark peptides on the sequence · 09436561
  tpylak authored 15 years ago
  
  SVN: 11813
  09436561
- LMS-1028 mark all peptides in the same sequence · e7c7a82b
  tpylak authored 15 years ago
  
  SVN: 11812
  e7c7a82b
Jul 16, 2009
- LMS-1028 modification attributes nTermMass and cTermMass tested. · 21f3f383
  felmer authored 15 years ago
  
  SVN: 11780
  21f3f383
Jul 15, 2009
- LMS-1028 Data model changed: MODIFICATION_TYPES dropped, MODIFIED_PEPTIDES introduced · 85cccd7d
  felmer authored 15 years ago
  
  SVN: 11765
  85cccd7d
- LMS-1028 Refactoring ProtXMLLoader out of ResultDataSetHandler and unit test written for loading. · 6771d390
  felmer authored 15 years ago
  
  SVN: 11760
  6771d390