Explore projects

UniversitätSpital Zürich pipeline (Phil Cheng & Mitch Levesque)

This project aims to collect (and possibly implement) ideas how the Renku platform (for analysis workflow and collaboration) and openBIS (data store and management) can be optimised for better interoperability.

Demo of Jupyter notebook for ETH ARDM workshops

This repository contains the components necessary to integrate a JupyterHub installation with openBIS.

PyBIS is a Python3 module to interact with openBIS. This repository contains various Jupyter notebooks that demonstrate the usage of the Python pyBIS module.

Code used to generate results for the publication "Accurate and predictive antibody repertoire profiling by molecular amplification fingerprinting"

Material for the containers & pipelines tutorials

software for EAWAG sensor data ware house.

Project handed over to Machine Learning & Computational Biology Lab, D-BSSE; further development continued at: https://github.com/BorgwardtLab/CAsMap .

Youscope

run openBIS in a lxd container as described here: https://wiki-bsse.ethz.ch/display/openBISDoc/openBIS+16.05+deployment+using+LXD+virtual+containers+-+USER+guide