Commits · 5f0d0b80e2f15b99db5d62afad342fe5b6de8d24 · sispub / openbis

Oct 31, 2011

[LMS-2621] allow for the type of property "COMPOUND_BATCH (material) /... · 4d97b084

kaloyane authored 13 years ago

[LMS-2621] allow for the type of property "COMPOUND_BATCH (material) / COMPOUND" to be of either VARCHAR or MATERIAL type.

SVN: 23468

4d97b084

[LMS-2621] integrate changes from Matt (step 1) · ae91b496

kaloyane authored 13 years ago

- improved readability
- created new master data registration script (library template property still needs to be imported manually)
- adjusted mock database SQL script
- fixed tests

SVN: 23465

ae91b496

Oct 19, 2011

create analysis CSV file using the Jython rollback stack infrastructure... · 0e62331b

kaloyane authored 13 years ago

create analysis CSV file using the Jython rollback stack infrastructure (enables deletion of CSV files on rollback)

SVN: 23348

0e62331b

Oct 05, 2011

fix: a problem with intensity rescaling behavior by replacing the ImageJ tiff... · a7489d02

brinn authored 13 years ago

fix: a problem with intensity rescaling behavior by replacing the ImageJ tiff reader (which performs an intensity rescaling operation during reading) by the BioFormats tiff reader

SVN: 23209

a7489d02

Sep 28, 2011
- LMS-2526 Sanofi: dropbox · d194c91b
  tpylak authored 13 years ago
  
  SVN: 23118
  d194c91b
Sep 27, 2011
- LMS-2526 Sanofi: dropbox · bd404ca5
  tpylak authored 13 years ago
  
  SVN: 23110
  bd404ca5
Sep 23, 2011
- minor: sanofi configuration · 1979aad3
  tpylak authored 13 years ago
  
  SVN: 23053
  1979aad3
- minor: sanofi configuration · 5c806278
  tpylak authored 13 years ago
  
  SVN: 23052
  5c806278
Aug 29, 2011
- minor: sanofi - synchronize Matt's changes · 4c512ad2
  tpylak authored 13 years ago
  
  SVN: 22680
  4c512ad2
- minor: sanofi - synchronize Matt's changes · 816b2332
  tpylak authored 13 years ago
  
  SVN: 22679
  816b2332
Aug 25, 2011
- correct metadata for Sanofi dropbox · 5fc01b1a
  tpylak authored 13 years ago
  
  SVN: 22639
  5fc01b1a
- correct metadata for Sanofi dropbox · 7cbd7398
  tpylak authored 13 years ago
  
  SVN: 22638
  7cbd7398
Aug 18, 2011
- LMS-2434 bugfix: set analysis procedure for segmentation datasets · aa25b074
  tpylak authored 13 years ago
  
  SVN: 22559
  aa25b074
- LMS-2434 bugfix: set analysis procedure for segmentation datasets · 9e6c33c4
  tpylak authored 13 years ago
  
  SVN: 22558
  9e6c33c4
Aug 09, 2011

LMS-2434 Sanofi: create Dropbox for registering re-analysis results... · bf6f6948

tpylak authored 13 years ago

LMS-2434 Sanofi: create Dropbox for registering re-analysis results (segmentation images or feature vectors)

SVN: 22436

bf6f6948

LMS-2434 Sanofi: create Dropbox for registering re-analysis results... · 462dbd3d

tpylak authored 13 years ago

LMS-2434 Sanofi: create Dropbox for registering re-analysis results (segmentation images or feature vectors)

SVN: 22435

462dbd3d

Aug 03, 2011
- bugfix; scientific notation with plus signs (e.g. 1.00E+02) parsed correctly · 84574945
  kaloyane authored 13 years ago
  
  SVN: 22333
  84574945
Jul 29, 2011
- minor: COMPUND_BATCH_WELL renamed to "COMPOUND_WELL" · b6dd6753
  kaloyane authored 13 years ago
  
  SVN: 22286
  b6dd6753
Jul 25, 2011
- [LMS-2401] Sanofi Jython Dropbox: added support for parsing numbers in scientific notation · c05e728f
  kaloyane authored 13 years ago
  
  SVN: 22259
  c05e728f
- [LMS-2401] parse analysis procedures from GE XML file · 75e01f8b
  kaloyane authored 13 years ago
  
  SVN: 22256
  75e01f8b
Jul 18, 2011
- SE-352 minor: Matt's openBIS URL · afb5a4f0
  tpylak authored 13 years ago
  
  SVN: 22178
  afb5a4f0
Jul 15, 2011
- SE-352 sanofi dropboxes: merge changes done by Matt, format emails better · 1c26ea26
  tpylak authored 13 years ago
  
  SVN: 22152
  1c26ea26
Jul 14, 2011

[LMS-2332] Matt: · d5aa32c2

kaloyane authored 13 years ago

1) library registration should not fail if not all compound wells are available in ABASE
2) more clear error message if there is no information for a PLATE in ABASE

SVN: 22139

d5aa32c2

Jul 13, 2011
- SE-352 do not strip tabs from the library template (to allow empty wells) · 7dce484f
  tpylak authored 13 years ago
  
  SVN: 22130
  7dce484f
- SE-352 1. minor email content improvement 2. do not strip tabs from the... · 2706a7f2
  tpylak authored 13 years ago
  
  SE-352 1. minor email content improvement 2. do not strip tabs from the library template (to allow empty wells) SVN: 22125
  2706a7f2
- SE-352 handle the case when plate barcode is not unique in openBIS · cd4eee95
  tpylak authored 13 years ago
  
  SVN: 22123
  cd4eee95
- minor: possible bugfix (RuntimeException ctor called with two params. and 2nd... · b566c8e1
  kaloyane authored 13 years ago
  
  minor: possible bugfix (RuntimeException ctor called with two params. and 2nd was String, when it should have been a Throwable) SVN: 22122
  b566c8e1
- minor: do not rely on global variable 'transaction' when executing "findPlateByCode" · 09704b28
  kaloyane authored 13 years ago
  
  SVN: 22121
  09704b28
- minor: typo · 37a9db8e
  kaloyane authored 13 years ago
  
  SVN: 22120
  37a9db8e
- [LMS-2332] more email changes · ae59f565
  kaloyane authored 13 years ago
  
  SVN: 22119
  ae59f565
- SE-352 bugfix in sending notification emails · 907e12a2
  tpylak authored 13 years ago
  
  SVN: 22117
  907e12a2
- [LMS-2332] bugfix · cb6906fa
  kaloyane authored 13 years ago
  
  SVN: 22116
  cb6906fa
- [LMS-2332] improved email sending · d752d214
  kaloyane authored 13 years ago
  
  SVN: 22113
  d752d214
- SE-352 maintain the original plate barcode, remove the part after the dot only for Abase queries · bb418fa4
  tpylak authored 13 years ago
  
  SVN: 22112
  bb418fa4
- [LMS-2332] e-mail improvements, not tested yet · 1417569c
  kaloyane authored 13 years ago
  
  SVN: 22110
  1417569c
- SE-352 add comments how to switch off using 'convert' · 70e56f32
  tpylak authored 13 years ago
  
  SVN: 22107
  70e56f32
- SE-352 add comments how to switch off using 'convert' · 300f5eea
  tpylak authored 13 years ago
  
  SVN: 22105
  300f5eea
- SE-352 bugfix: allow to have duplicated materials on the plate, minor email content improvements · 44aac754
  tpylak authored 13 years ago
  
  SVN: 22104
  44aac754
Jul 12, 2011
- [LMS-2389] improvements · 88ba78fe
  kaloyane authored 13 years ago
  
  SVN: 22084
  88ba78fe
Jul 08, 2011
- LMS-2389 set analysis procedure using the api · 22ce5772
  tpylak authored 13 years ago
  
  SVN: 22064
  22ce5772