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Commit ad508698 authored by tpylak's avatar tpylak
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fix tests

SVN: 13724
parent c1c15998
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...@@ -16,6 +16,8 @@ ...@@ -16,6 +16,8 @@
package ch.ethz.bsse.cisd.dsu.dss; package ch.ethz.bsse.cisd.dsu.dss;
import static ch.ethz.bsse.cisd.dsu.dss.FlowLaneFeeder.asFileName;
import java.io.File; import java.io.File;
import java.io.FilenameFilter; import java.io.FilenameFilter;
import java.util.Arrays; import java.util.Arrays;
...@@ -265,8 +267,10 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase ...@@ -265,8 +267,10 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
SAMPLE_CODE + SampleIdentifier.CONTAINED_SAMPLE_CODE_SEPARARTOR_STRING + "2"; SAMPLE_CODE + SampleIdentifier.CONTAINED_SAMPLE_CODE_SEPARARTOR_STRING + "2";
assertEquals("G2_" + sampleName, transferedFiles[0].getName()); assertEquals("G2_" + sampleName, transferedFiles[0].getName());
File metaFile = getFile(transferedFiles[0], FlowLaneFeeder.META_DATA_FILE_TYPE); File metaFile = getFile(transferedFiles[0], FlowLaneFeeder.META_DATA_FILE_TYPE);
assertEquals(sampleName + "_" + EXTERNAL_SAMPLE_NAME + FlowLaneFeeder.META_DATA_FILE_TYPE, String myFileName =
metaFile.getName()); asFileName(sampleName + "_" + EXTERNAL_SAMPLE_NAME
+ FlowLaneFeeder.META_DATA_FILE_TYPE);
assertEquals(myFileName, metaFile.getName());
assertHardLinkOnSameFile(originalFlowLane2, getFile(transferedFiles[0], "2.srf")); assertHardLinkOnSameFile(originalFlowLane2, getFile(transferedFiles[0], "2.srf"));
context.assertIsSatisfied(); context.assertIsSatisfied();
...@@ -306,8 +310,8 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase ...@@ -306,8 +310,8 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
SAMPLE_CODE + SampleIdentifier.CONTAINED_SAMPLE_CODE_SEPARARTOR_STRING + "2"; SAMPLE_CODE + SampleIdentifier.CONTAINED_SAMPLE_CODE_SEPARARTOR_STRING + "2";
assertEquals("G2_" + sampleName, transferedFiles[0].getName()); assertEquals("G2_" + sampleName, transferedFiles[0].getName());
File metaFile = getFile(transferedFiles[0], FlowLaneFeeder.META_DATA_FILE_TYPE); File metaFile = getFile(transferedFiles[0], FlowLaneFeeder.META_DATA_FILE_TYPE);
assertEquals(sampleName + "_" + EXTERNAL_SAMPLE_NAME + FlowLaneFeeder.META_DATA_FILE_TYPE, assertEquals(asFileName(sampleName + "_" + EXTERNAL_SAMPLE_NAME
metaFile.getName()); + FlowLaneFeeder.META_DATA_FILE_TYPE), metaFile.getName());
List<String> metaData = FileUtilities.loadToStringList(metaFile); List<String> metaData = FileUtilities.loadToStringList(metaFile);
String lastLine = metaData.remove(metaData.size() - 1); String lastLine = metaData.remove(metaData.size() - 1);
assertEquals("[Parent\tnull, Code\tfc:2, Contact Person Email\tab@c.de, " assertEquals("[Parent\tnull, Code\tfc:2, Contact Person Email\tab@c.de, "
...@@ -472,7 +476,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase ...@@ -472,7 +476,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
String metaDataFileName = String metaDataFileName =
flowLaneSampleCode + (flowLaneNumber.equals("2") ? "_" + EXTERNAL_SAMPLE_NAME : "") flowLaneSampleCode + (flowLaneNumber.equals("2") ? "_" + EXTERNAL_SAMPLE_NAME : "")
+ FlowLaneFeeder.META_DATA_FILE_TYPE; + FlowLaneFeeder.META_DATA_FILE_TYPE;
metaDataFileName = FlowLaneFeeder.asFileName(metaDataFileName); metaDataFileName = asFileName(metaDataFileName);
assertEquals(true, new File(ds, metaDataFileName).exists()); assertEquals(true, new File(ds, metaDataFileName).exists());
assertEquals(true, new File(dropBox, Constants.IS_FINISHED_PREFIX + fileName).exists()); assertEquals(true, new File(dropBox, Constants.IS_FINISHED_PREFIX + fileName).exists());
} }
......
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