Commits · e83c352a1d0f4875c84a86c9e87baff2f61172a4 · sispub / openbis

Jun 18, 2008
- [LMS-460] · e83c352a
  ribeaudc authored 16 years ago
  
  change: - BDS does not write 'TRUE' but 'true' for flag parameters. SVN: 6673
  e83c352a
- remove: - 'format' and 'structure' directories. · 4520fa43
  ribeaudc authored 16 years ago
  
  SVN: 6670
  4520fa43
Jun 17, 2008
- minor: - Remove warning. · 0b14f7e8
  ribeaudc authored 16 years ago
  
  SVN: 6642
  0b14f7e8
- remove: - Run configuration file. · 7e892849
  ribeaudc authored 16 years ago
  
  SVN: 6641
  7e892849
- [LMS-424] BDS consistency checking (data structure V1.0 + HCS_IMAGE V1.0) · 2c7ae64a
  izabel authored 16 years ago
  
  SVN: 6638
  2c7ae64a
Jun 15, 2008
- change: - 'arg4j' is now a project maintained by the CISD team. · 7819afba
  ribeaudc authored 16 years ago
  
  remove: - 'arg4j' library from 'libraries' project. SVN: 6598
  7819afba
Jun 11, 2008
- SVN: 6562 · 0c7f2f96
  izabel authored 16 years ago
  
  0c7f2f96
Jun 09, 2008
- minor: - 'append(Object)' should delegate its call to 'append(String, Object)'. · 6747425c
  ribeaudc authored 16 years ago
  
  SVN: 6503
  6747425c
Jun 04, 2008

[LMS-424] add: - First version of the BDS Structure Checker. · 173932f5

ribeaudc authored 16 years ago

- Some test data for the BDS Structure Checker.
- Run configuration file to start the BDS Structure from Eclipse.

SVN: 6443

173932f5

May 26, 2008
- add: - 'DateFormatThreadLocal': a 'ThreadLocal' extension initialized with a 'SimpleDateFormat'. · 9f95258e
  ribeaudc authored 16 years ago
  
  SVN: 6297
  9f95258e
May 24, 2008
- fix: unsafe usage of SimpleDateFormat object in different threads · a2809d70
  brinn authored 16 years ago
  
  SVN: 6293
  a2809d70
May 23, 2008
- fix: - Bugs found by FindBugs. · b01eb0d2
  ribeaudc authored 16 years ago
  
  SVN: 6261
  b01eb0d2
May 20, 2008
- change: - Put the time out and sleep milliseconds number in 'Constants' common package. · 7d512ba6
  ribeaudc authored 16 years ago
  
  SVN: 6170
  7d512ba6
Apr 24, 2008
- test fixes · fe38e865
  izabel authored 16 years ago
  
  SVN: 5797
  fe38e865
- fix: - Wrong pattern used in Unit test: 'fail' method throws an 'AssertionError'. · 6b016526
  ribeaudc authored 16 years ago
  
  SVN: 5785
  6b016526
Apr 23, 2008
- change: set a time out of 10s for the hard link creation process in order to... · 4f458942
  brinn authored 16 years ago
  
  change: set a time out of 10s for the hard link creation process in order to prevent infinite hangs when using remote file systems SVN: 5778
  4f458942
- replace same asserts by if constructs · d87f5fa1
  felmer authored 16 years ago
  
  SVN: 5748
  d87f5fa1
Apr 21, 2008
- bug concerning large plates fixed: refactoring... · ac3d8874
  felmer authored 16 years ago
  
  bug concerning large plates fixed: refactoring Location.tryCreateLocationFromMatriyCoordinate() using ConversionUtils.parseSpreadsheetLocation() SVN: 5730
  ac3d8874
- fix: types.BooleanOrUnknown to new package ch.systemsx.cisd.common.types · 80f3d1cb
  brinn authored 16 years ago
  
  SVN: 5726
  80f3d1cb
Apr 18, 2008
- fix: - Unit tests. · 393ad3ec
  ribeaudc authored 16 years ago
  
  SVN: 5696
  393ad3ec
- fix: - 'DataSet.loadFrom' should load the 'isComplete' flag or all previous changes will be lost. · f74d7a39
  ribeaudc authored 16 years ago
  
  SVN: 5695
  f74d7a39
- change: - 'fail' did not work as they should. · 888156b2
  ribeaudc authored 16 years ago
  
  SVN: 5686
  888156b2
- add: - TODO. · 4ab1b3f0
  ribeaudc authored 16 years ago
  
  SVN: 5682
  4ab1b3f0
- fix: - Ensure that 'number_of_channels' and 'contains_original_data' format parameters are typed. · fb03ccc5
  ribeaudc authored 16 years ago
  
  SVN: 5681
  fb03ccc5
- fix: - It should not be possible to get an instance of 'Geometry'. Only its... · a4d78567
  ribeaudc authored 16 years ago
  
  fix: - It should not be possible to get an instance of 'Geometry'. Only its subclasses implements 'getDirectoryName'. SVN: 5676
  a4d78567
Apr 17, 2008
- bug fixed · 3edbefb5
  felmer authored 16 years ago
  
  SVN: 5673
  3edbefb5
- bug fixed concerning handling of internal data set codes · aa717e25
  felmer authored 16 years ago
  
  SVN: 5664
  aa717e25
- LMS-335 add instance code · ee08711c
  felmer authored 16 years ago
  
  SVN: 5656
  ee08711c
Apr 16, 2008
- LMS-333 extends IHCSImageFormatedData, add attribute isComplete to DataSet · f2489b3b
  felmer authored 16 years ago
  
  SVN: 5612
  f2489b3b
Apr 15, 2008
- rename factory method · 3e823868
  felmer authored 16 years ago
  
  SVN: 5539
  3e823868
Apr 09, 2008
- reformat: adapt comments to of 100 characters per line · 804bfc75
  brinn authored 16 years ago
  
  SVN: 5426
  804bfc75
Apr 07, 2008

fix: - Integration tests (maybe...). · 3d45bf25
ribeaudc authored 16 years ago
```
SVN: 5320
```
3d45bf25

[LMS-107] · 80979e1a

ribeaudc authored 16 years ago

add: - 'IProcedureAndDataTypeExtractor' parameter to 'IStorageProcessor.storeData'.

SVN: 5317

80979e1a

[LMS-107] · 720c1063

ribeaudc authored 16 years ago

remove: - BDS 'ObservableType' and 'SampleType'. Correctness of given type code is checked by ETL server.
add: - 'DataStructureV1_0.setDataSet'.

SVN: 5312

720c1063

[LMS-107] · 1f3836a9

ribeaudc authored 16 years ago

add: - Unit tests for 'Sample' and 'DataSet'.
change: - format/format_code ---> format/code, format/format_variant ---> format/variant ('--->' means renamed).
- sample/sample_type_description ---> sample/type_description, sample/sample_type_code ---> sample/type_code, sample/sample_code ---> sample/code.
- Integration tests adapted (they should not fail).

SVN: 5288

1f3836a9

Apr 04, 2008
- change: - Use 'production_timestamp' instead of 'production_date'. · d3d3e053
  ribeaudc authored 16 years ago
  
  SVN: 5278
  d3d3e053
- change: - Renaming and removing of some parameters done. · 20ddd584
  ribeaudc authored 16 years ago
  
  - 'BDSStorageProcessorTest' put in the broken group (will be fixed very soon). - Integration tests probably broken (will be fixed very soon). add: - 'DataSet' to BDS library (but not yet used). SVN: 5274
  20ddd584
- change: - Upgrading 'jmock' library to version 2.4. · faf1c07b
  ribeaudc authored 16 years ago
  
  SVN: 5257
  faf1c07b
Apr 03, 2008

[SE-16] · 73d6cbba

ribeaudc authored 16 years ago

remove: - TODO by checking number of channels in 'HCSImageAnnotations'.

SVN: 5212

73d6cbba

[SE-16] · fd02367c

ribeaudc authored 16 years ago

remove: - TODO regarding 'ChannelList'.
- 'ChannelList'.
add: - Unit test for 'Channel'.
- 'ChannelSetHelper' which helps to construct a sorted set of channels in 'HCSImageFileExtractor' implementations.

SVN: 5204

fd02367c