SVN: 34371

Small fix - don't assume that all codes are 3 characters long and take the length of the prefix, adding the numeric code at the end

SVN: 34370

SVN: 34369

SVN: 34368

SVN: 34367

SVN: 34366

SVN: 34364

SVN: 34363

SVN: 34361

SVN: 34360

- changed the split char of dual-indexed runs to "+"
- ignore additional undetermined statistics added to the XML (ours is complete)

SVN: 34359

SVN: 34358

SVN: 34357

SVN: 34356

SVN: 34354

SVN: 34347

SVN: 34346

SVN: 34345

SVN: 34344

SVN: 34343

SVN: 34342

SSDM-2099 : V3 DSS API - add possiblity to download files and add more thorough tests of the whole dss api

SVN: 34341

SSDM-2054 : Multi Data Set Archiving Finalizer improvements -  Handle the case when the original archive file no longer exists.

SVN: 34340

SVN: 34339

SVN: 34338

SSDM-2054: "Finalizer stops counting time during maintenance": Introducing IPause and FileBasedPause. WaitingHelper extended to be pausable.

SVN: 34337

SSDM-2054: "Finalizer counts the time from the end of the primary archiving job and not when it is started." improve logging of WaitingHelper

SVN: 34336

SSDM-2099 : V3 DSS API - add possiblity to download files and add more thorough tests of the whole dss api

SVN: 34335

SSDM-2054: "The mandatory cleaner properties are checked the first time in case of failure". Create archiver during initialization of DataStoreServer

SVN: 34334

SSDM-2054: "Finalizer counts the time from the end of the primary archiving job and not when it is started." MultiDataSetArchiverTest fixed

SVN: 34333

SSDM-2054: "Finalizer counts the time from the end of the primary archiving job and not when it is started." implemented but produces confusing log messages.

SVN: 34332

SSDM-2069: MonitoredIoStreamCopier: removing unnecessary synchronized blocks. Using the copier for multi data set archiving.

SVN: 34331

SVN: 34330

SVN: 34329

SVN: 34328

SSDM-2017: bug fixed in loadUnchangedData(). Readers of ReaderAndFileHandler are replaced if needed. Old readers are explicitly closed (not waiting for gc).

SVN: 34327

SSDM-2017: IImageReader.close() introduced. Closes BioFormats Reader in DefaultBioformatsImageReader

SVN: 34325

SVN: 34324

SSDM-2017 Performance improvements in thumbnail generation : by re-using Bio Format Reader and random access files and closing both in finalize method.

SVN: 34323

SVN: 34322