- fillBean methods without a beanInstance are renamed to createBean
- Some TODOs added concerning the checking methods

SVN: 992

- 'canonifyRelativePath' method
remove:
- 'getLine' method

SVN: 971

- 'getPropertyDescriptors' moved from 'ExperimentFactory' to 'BeanUtils'

SVN: 932

- 'DefaultLineFilter' renamed to 'HeaderLineFilter'
- part of 'DefaultLineFilter' logic moved to its own ILineFilter implementation ---> ILineFilter.EXCLUDE_EMPTY_AND_COMMENT_LINE

SVN: 922

- 'FilteredList' based on 'Validator' implementations.
- JUnit tests for upper framework.

SVN: 911

- More intelligent 'Comparator' for well codes

SVN: 906

SVN: 895

fix: raw type warnings in fillBeans related methods

SVN: 893

revert: changes to @Mandatory annotation of r714, since it has a negative impact on the robustness when doing refactorings

SVN: 742

- new classes.

SVN: 711

- Mandatory annotation.
remove:
- TODO related to the upper annotation.

SVN: 709

remove: BeanNameMapping, since it is a questionable feature and one always can use Converters which are robust under refactoring and which are features of the conversion process, not the Bean itself

SVN: 707

- DBRestrictions moved from 'common' to 'lims' project because it has a dependency to the Spring framework: it throws a DataIntegrityViolationException instead of UserFailureException. We do not want UserFailureException in DAO.

SVN: 699

SVN: 693

SVN: 664

- put a 'final'

SVN: 599

- XML serialization for Java Beans.

SVN: 598

- TODO by adding an 'IMPORTANT NOTE'.

SVN: 570

SVN: 522

- JUnit test for UserFailureException.

SVN: 500

- getCurrentMethod() with its corresponding JUnit test.

SVN: 499

SVN: 470

SVN: 469

- 'DBRestrictions' and 'SQLCommandTokenizer' (with corresponding Unit tests) moved from package 'ch.systemsx.cisd.common.parser' to package 'ch.systemsx.cisd.common.db'
- [DBRestrictions] 'findInArray' method uses 'ArrayUtils.indexOf' method.
- [DBRestrictions] better diagnostics when command starts correctly but can not be parsed because it is ill-formed.

SVN: 467

- 'setPropertyMapper' method from IParserObjectFactory: it does not belong to this interface.
- DO_NOTHING_OBJECT_FACTORY -> STRING_ARRAY_OBJECT_FACTORY.

SVN: 462

- 'DBRestrictions' and 'SQLCommandTokenizer' (with corresponding Unit tests) moved from package 'ch.systemsx.cisd.common.parser' to package 'ch.systemsx.cisd.common.db'
- [DBRestrictions] 'findInArray' method uses 'ArrayUtils.indexOf' method.
- [DBRestrictions] better diagnostics when command starts correctly but can not be parsed because it is ill-formed.

SVN: 458

refactor:
- move the DirectoryScanningTimerTask to common in order to be able to use it in the etlserver
- change the DirectoryScanningTimerTask in such a way that suppressing .is_finished_xxx files has to be done explicitely by using a NamePrefixFileFilter

SVN: 453

- Unit test for DateConverter.
change:
- Possibility to set a default value in IdentityStingConverter constructor.
minor:
- private method made final.

SVN: 448

- unit test for DefaultLineFilter
- usage test of ILineFilter in DefaultReaderParser
change:
- ensure the DefaultLineFilter gets the header line number in the constructor

SVN: 421

SVN: 388

SVN: 372

SVN: 371

change: do not allow null headerTokens since they are likely to be a programming error and don't handle the degenerate case any special

SVN: 369

SVN: 315

- class DBRestrictions and tests for column length and constraints checking

SVN: 288

- rename FileUtilities.loadText() to loadToString()
add:
- methods FileUtilities.loadToStringList()
doc:
- improve javadoc

SVN: 286

SVN: 273

- FileUtilities: add loadStringResource()

SVN: 234

SVN: 208

SVN: 206