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20 authors
  1. Oct 22, 2012
  3. Oct 19, 2012
    • kohleman's avatar
      - added log level to logger · f287b102
      kohleman authored 
      - added missing openBIS properties in properties file
- added support for lane dependent de-multiplex command creation, creates a file with a command line call per lane including the correct base mask (needed for dual indexed runs which include single indexed libraries)
- created a main function instead of having a lot of global variables

SVN: 27244
      f287b102
  5. Oct 18, 2012
  7. Oct 16, 2012
  9. Oct 10, 2012
  11. Oct 09, 2012
    • kohleman's avatar
      - modified comment annotations · 564bcf4c
      kohleman authored 
      - changed from root logger to a named logger
- added out dir option
- added single lane option (single lane demultiplexing)
- added debug mode for verbose logging
- print standard help also when no options are given
- added sanitation of strings function
- modified createHiseqSampleSheet to be able to handle all kinds of different combinations of demultiplexing and indexes

SVN: 27120
      564bcf4c
  13. Oct 08, 2012
  15. Oct 05, 2012
  17. Oct 04, 2012
  19. Aug 30, 2012
  21. Aug 24, 2012
  23. Aug 06, 2012
  25. Jul 30, 2012
  27. Jul 24, 2012
  29. Jul 06, 2012
  31. Jun 25, 2012
  33. Jun 22, 2012
    • kohleman's avatar
      initial checkin: · c638f173
      kohleman authored 
      - parses Unaligned_no_mismatch/Basecall_Stats_<FC>/Flowcell_demux_summary.xml calculates several statistical values and sets the properties of the matching data sets to those values

SVN: 25838
      c638f173
  35. Jun 14, 2012