Commits · 3c498f35ae205c088c3ad325df8dd60603e42892 · sispub / openbis

Feb 17, 2010
- SE-207 reverse changes quickly · f0979c26
  tpylak authored 15 years ago
  
  SVN: 14800
  f0979c26
- SE-207 LMC: moving absolute symbolic links between directories fails on cifs share · 9503e3f7
  tpylak authored 15 years ago
  
  SVN: 14796
  9503e3f7
Feb 09, 2010
- minor refactoring · 5546098f
  tpylak authored 15 years ago
  
  SVN: 14664
  5546098f
Feb 02, 2010

SE-201 LMC: 1. do not follow symbolic links when deleting directories 2.... · ec308ab5

tpylak authored 15 years ago

SE-201 LMC: 1. do not follow symbolic links when deleting directories 2. maintain original file extension in BDS 3. servlet which splits images 4. specific tiles arrangement

SVN: 14598

ec308ab5

Jan 27, 2010
- minor: fix unit tests · d498a857
  tpylak authored 15 years ago
  
  SVN: 14487
  d498a857
- SE-187 LMC: change BDS to allow symbolic links to original data · e76e2c64
  tpylak authored 15 years ago
  
  SVN: 14484
  e76e2c64
Dec 08, 2009

LMS-1275 1. Screening pilot: plate visualisation 2. fixes and improvements in... · 5a1ce018

tpylak authored 15 years ago

LMS-1275 1. Screening pilot: plate visualisation 2. fixes and improvements in BDS 3. make GenericSampleViewer extendable 4. Allow to list material properties with EODSQL

SVN: 13740

5a1ce018

Nov 16, 2009

add BuildAndEnvironmentInfo class in order to avoid shadowing by using... · b142ffe7

felmer authored 15 years ago

add BuildAndEnvironmentInfo class in order to avoid shadowing by using application specific BUILD.INFO files

SVN: 13402

b142ffe7

Aug 15, 2009
- fix: wrong src file · aedbdf3b
  brinn authored 15 years ago
  
  SVN: 12094
  aedbdf3b
Jun 26, 2009
- fix unit tests, update cisd-base-test library · 741a374a
  tpylak authored 15 years ago
  
  SVN: 11584
  741a374a
Apr 07, 2009
- LMS-820 move checksum calculator from bds to common, add possibility to calculate md5 from String · 3924a1b2
  tpylak authored 15 years ago
  
  SVN: 10612
  3924a1b2
Mar 29, 2009
- change: use cisd-args4j.jar instead of live project · 883b51e3
  brinn authored 15 years ago
  
  SVN: 10446
  883b51e3
- change: switch all projects from base live project to jar file · 934999c5
  brinn authored 15 years ago
  
  SVN: 10419
  934999c5
Mar 25, 2009
- refactor: move Unix from common.os package to base.unix package · a1d87c57
  brinn authored 15 years ago
  
  move: AbstractFileSystemTestCase from common.filesystem to base.tests SVN: 10365
  a1d87c57
Mar 24, 2009
- refactor: move exceptions and utilites from common to base · 7ad97944
  brinn authored 15 years ago
  
  SVN: 10364
  7ad97944
- refactor: unify naming for unchecked exceptions · d96720ed
  brinn authored 15 years ago
  
  SVN: 10355
  d96720ed
Oct 08, 2008
- [LMS-587] add: - Small Unit test for the BDS read-only mode. · 77c088a3
  ribeaudc authored 16 years ago
  
  SVN: 8596
  77c088a3
Oct 06, 2008
- [LMS-587] change: - Improve BDS read-only mode. · 5e11942d
  ribeaudc authored 16 years ago
  
  SVN: 8552
  5e11942d
Sep 15, 2008
- [LMS-578] observable type => data set type · 6f1594d5
  izabel authored 16 years ago
  
  SVN: 8298
  6f1594d5
Sep 08, 2008
- change: rename classes to adhere to coding standard · 4f75007f
  brinn authored 16 years ago
  
  SVN: 8226
  4f75007f
Sep 04, 2008
- [LMS-559] add: 'read-only' mode to BDS. · 8341fba3
  ribeaudc authored 16 years ago
  
  SVN: 8206
  8341fba3
Aug 29, 2008
- fix: - Specify a 'retryAnalyzer' for some flaky methods. · 3b6c2840
  ribeaudc authored 16 years ago
  
  SVN: 8128
  3b6c2840
Aug 26, 2008
- change: - 'BooleanOrUnknown.getByNiceRepresentation' renamed to 'BooleanOrUnknow.resolve'. · ff126d81
  ribeaudc authored 16 years ago
  
  remove: - 'register-controls', 'register-oligos' and 'register-viruses' commands. SVN: 8078
  ff126d81
Aug 21, 2008
- fix: - Integration tests. · fbe8c1be
  ribeaudc authored 16 years ago
  
  SVN: 8015
  fbe8c1be
- [LMS-493] change: - Hibernation of 'ExternalDataDTO' started. · 537fde75
  ribeaudc authored 16 years ago
  
  SVN: 8005
  537fde75
Aug 20, 2008
- [LMS-559] change: - Move all the methods to 'IDataStructureV1_X' interface. · 599b2354
  ribeaudc authored 16 years ago
  
  SVN: 7979
  599b2354
- [LMS-551] add: - 'ExperimentIdentifierWithUUID'. · 92a30e41
  ribeaudc authored 16 years ago
  
  change: - 'DataStructureV1_1' loads a 'ExperimentIdentifierWithUUID'. SVN: 7977
  92a30e41
Aug 15, 2008
- [LMS-557] add: - Database schema 24 and its migration script. · bdcbf1e2
  ribeaudc authored 16 years ago
  
  change: - Global code renamed in UUID all over the code. SVN: 7925
  bdcbf1e2
- minor: - Javadoc added. · f8691ddd
  ribeaudc authored 16 years ago
  
  SVN: 7918
  f8691ddd
- change: - Upgrade libraries to the latest version (when possible and adequate). · 11107997
  ribeaudc authored 16 years ago
  
  SVN: 7916
  11107997
Aug 14, 2008
- fix: - Unit test. · fdb4b707
  ribeaudc authored 16 years ago
  
  SVN: 7914
  fdb4b707
- change: - Convert an assertion into a DataStructureException. · 44f25210
  ribeaudc authored 16 years ago
  
  - 'performClosing' should be performed before the version is written out. SVN: 7913
  44f25210
Aug 13, 2008

change: move file system related classes from... · 8f06d055

brinn authored 16 years ago

change: move file system related classes from ch.systemsx.cisd.common.utilities to ch.systemsx.cisd.common.filesystem

SVN: 7906

8f06d055

[LMS-531] change: - 'database_instance_code' to 'database_instance' (same as... · 1bb91bcd

ribeaudc authored 16 years ago

[LMS-531] change: - 'database_instance_code' to 'database_instance' (same as experiment identifier).
- 'SampleWithOwner' should override 'equals' and 'hashCode' methods.
add: - 'instance_global_code'.

SVN: 7855

1bb91bcd

Aug 12, 2008
- [LMS-531] fix: - Database instance code is never empty in 'SampleWithOwner'. · b9b9cf6e
  ribeaudc authored 16 years ago
  
  SVN: 7831
  b9b9cf6e
- [LMS-531] change: - Complete 'DataStructureV1_1Test'. · 166b5afd
  ribeaudc authored 16 years ago
  
  SVN: 7823
  166b5afd
- [LMS-531] add: - 'DataStructureV1_1' and 'SampleWithOwner'. · 07d62afa
  ribeaudc authored 16 years ago
  
  change: - Switch to BDS version 1.1 (v1.0 before). SVN: 7815
  07d62afa
Aug 11, 2008

change: - ensure all file operations are monitored for hanging (unavailable remote resources) · f35b44c1

brinn authored 16 years ago

- implement performance improvements for slow remote file shares in class HCSImageFormattedData
[LMS-472] Solve performance problem of BDS dataset creation and process triggering on trunk
merged from branch 8.04.x, improvements for 8.04.3

SVN: 7802

f35b44c1

add: - classes TimingParameters, FileOperations, FileCopyUtils, QueueingPathRemover & related · 014c6f82

brinn authored 16 years ago

- fine-grained activity in MonitoringProxy
- logging in ConcurrencyUtilities
- list*() methods to FileUtilities
[LMS-472] Solve performance problem of BDS dataset creation and process triggering on trunk
merged from branch 8.04.x, improvements for 8.04.3 common

SVN: 7800

014c6f82

Jul 23, 2008
- refactor: immutable copying (using hard links) to be easier to use for both files and directories · 192ceb2d
  brinn authored 16 years ago
  
  change: include native libraries into datamover.jar SVN: 7420
  192ceb2d