SSDM-2366: search domain service execution in Java and JS with tests. search domain service search only API classes in Java nad JS.

SSDM-5101 : V3 API: Allowing registering physical data sets via the JSON facade - use only one PutDataSetService instance + cleanup unregistered files together with a session of a person that uploaded them

SSDM-5101 : V3 API: Allowing registering physical data sets via the JSON facade - add more logging and introduce "folderPath" upload servlet parameter which can be used to control which folder uploaded files are stored in

SVN: 39122

SVN: 39112

SSDM-6019: Fixing a bug reveal in openBIS manual tests: Custom import failed. The fix doesn't check authorization for custom import because the data set owner isn't known.

SVN: 39100

SSDM-5897: Introducing ICredentials implemented by OpenBISAuthenticationInterceptor in order to fix dependencies. AbstractMaintenanceTaskWithStateFile introduced. DataSetAndPathInfoDBConsistencyCheckTaskTest will be subclass.

SVN: 39093

SSDM-5897: DataSetAndPathInfoDBConsistencyCheckTask refactored to use V3 API instead of EncapsulatedOpenBISService.

SVN: 39092

SSDM-5897: DataSetAndPathInfoDBConsistencyChecker refactored by using data set code instead of IDatasetLocation.

SVN: 39091

SSDM-6019 : Project Authorization - modify @RolesAllowed annotations at non-entity related methods - make sure old APIs are backward compatible after the project authorization is introduced

SVN: 39080

SVN: 39076

SSDM-6019 : Project Authorization - modify @RolesAllowed annotations at non-entity related methods - fix dependencies

SVN: 39072

SVN: 39071

SVN: 39070

SVN: 39045

SVN: 39000

SVN: 38995

SVN: 38963

SSDM-5370 : openBIS sync datasource doesn't scale - in data source connector use the same logger as in the harvester (depending on the sync configuration it can log to a dedicated log file) + improve merging of resource list parts (e.g. fix xml namespaces problems)

SVN: 38951

SSDM-5370 : openBIS sync datasource doesn't scale - change the harvester to properly handle both regular resource lists as well as resource list indices

SVN: 38947

SSDM-5370 : openBIS sync datasource doesn't scale - improve performance of fetching entities from the datasource

SVN: 38913

SVN: 38889

SSDM-5639: If necessary save temporarily HDF5 file from the TAR archive in order to scan it for its content.

SVN: 38792

SVN: 38766

SVN: 38762

SSDM-5661 : AS V3 API : Support for semantic annotations - create/get methods (JS tests still missing) - bugfixes

SVN: 38757

SVN: 38747

SVN: 38715

SVN: 38713

SSDM-5515: Extending Hdf5AwareHierarchicalContentFactory in order to handle content with multiple data sets (called tree roots). Making TarArchiver and MultiDataSetArchiver h5 folder flags aware.

SVN: 38712

SVN: 38710

SVN: 38641

SSDM-5400: Refactoring Hdf5AwareHierarchicalContentFactory. Remove unnecessary argument in constructor of PathinfoDatabaseFeedingTask. PathinfoDatabaseFeedingTaskTest rewritten by using real files as examples. Also tests for h5Folders and h5arFolders added.

SVN: 38640

SVN: 38637