Commits · 20d433c69b8315bed0d32c786cd0f3c076d24202 · sispub / openbis

Dec 04, 2012
- - changed the last element in the Sample Sheet to the whole running folder name · 20d433c6
  kohleman authored 12 years ago
  
  SVN: 27860
  20d433c6
Dec 03, 2012
- - added pickled Demux List · 76d570f9
  kohleman authored 12 years ago
  
  SVN: 27836
  76d570f9
Nov 29, 2012
- BIS-263 SP-400 : Clicking on a sample identifier opens the sample. · b866f987
  cramakri authored 12 years ago
  
  SVN: 27801
  b866f987
- BIS-263 SP-400 : Restructured code to keep static values unchanged · 85c625af
  cramakri authored 12 years ago
  
  SVN: 27800
  85c625af
- BIS-263 SP-400 : Preparing for having click open the sample details tab. · 60e3f0f4
  cramakri authored 12 years ago
  
  SVN: 27799
  60e3f0f4
- BIS-263 SP-400 : Added animations. · ad8ac924
  cramakri authored 12 years ago
  
  SVN: 27798
  ad8ac924
Nov 28, 2012
- BIS-263 SP-400 : Finalized graph interaction · b666c264
  cramakri authored 12 years ago
  
  SVN: 27786
  b666c264
- BIS-263 SP-400 : Properly handle showing and hiding nodes. · 4e5f8af5
  cramakri authored 12 years ago
  
  SVN: 27785
  4e5f8af5
- BIS-263 SP-400 : Renamed methods from show[foo] to draw[foo] · a0615c85
  cramakri authored 12 years ago
  
  SVN: 27784
  a0615c85
- BIS-263 SP-400 : Initial implementation of collapsing/expanding nodes. · 8af5983a
  cramakri authored 12 years ago
  
  SVN: 27783
  8af5983a
- BIS-263 SP-400 : Starting work on collapsing / expanding nodes. · d237cd04
  cramakri authored 12 years ago
  
  SVN: 27782
  d237cd04
- BIS-263 SP-400 : Color links whenever there is a possible ambiguity · 5c7032c4
  cramakri authored 12 years ago
  
  SVN: 27781
  5c7032c4
- BIS-263 SP-400 : Remove the nav elements in the webapp header · c45ea868
  cramakri authored 12 years ago
  
  SVN: 27780
  c45ea868
Nov 27, 2012
- BIS-263 SP-400 : Use colors to show links · 24a8ad65
  cramakri authored 12 years ago
  
  SVN: 27777
  24a8ad65
- BIS-263 SP-400 : Show samples and links. · e5e72867
  cramakri authored 12 years ago
  
  SVN: 27776
  e5e72867
- BIS-263 SP-400 : Show all the sample labels. Still need to add links. · ee14a529
  cramakri authored 12 years ago
  
  SVN: 27775
  ee14a529
- BIS-263 SP-400 : Removed unused code. · e357e386
  cramakri authored 12 years ago
  
  SVN: 27774
  e357e386
- BIS-263 SP-400 : Preparation for switch to SVG display · 00b015b4
  cramakri authored 12 years ago
  
  SVN: 27773
  00b015b4
- BIS-263 SP-400 : Show multiplex to library cardinality · 2d0b28cf
  cramakri authored 12 years ago
  
  SVN: 27772
  2d0b28cf
- BIS-263 SP-400 : Convert server results to sample graph node objects · a3bfb86c
  cramakri authored 12 years ago
  
  SVN: 27771
  a3bfb86c
Nov 26, 2012
- BIS-263 SP-400 : Retrieve sample information from the AS. · ecee7b69
  cramakri authored 12 years ago
  
  SVN: 27768
  ecee7b69
- BIS-263 SP-400 : Initial checking of sample bottom-up graph web-app · 8ffd821c
  cramakri authored 12 years ago
  
  SVN: 27767
  8ffd821c
Nov 18, 2012
- Changes the DataSetInformation to contain the sample properties rather than... · a6a01353
  brinn authored 12 years ago
  
  Changes the DataSetInformation to contain the sample properties rather than then top sample properties. SVN: 27665
  a6a01353
Nov 17, 2012

Implement adding attachments to experiments and projects in... · 69f16b4a

brinn authored 12 years ago

Implement adding attachments to experiments and projects in performEntityOperations(). Add support for project updates to performEntityOperations() and to the dropbox transaction.

SVN: 27660

69f16b4a

Nov 13, 2012
- - the data sets are now grouped by lane and also display an Index if existent · c142ce64
  kohleman authored 12 years ago
  
  SVN: 27594
  c142ce64
Nov 08, 2012
- - remove echo · a0becfc8
  kohleman authored 12 years ago
  
  SVN: 27558
  a0becfc8
- -remove the echo to make it less verbose · cdb6f936
  kohleman authored 12 years ago
  
  SVN: 27557
  cdb6f936
- - added verbose mode which writes out to stdout · d7954796
  kohleman authored 12 years ago
  
  SVN: 27556
  d7954796
Nov 07, 2012
- - added a verbose mode which prints out the sample Sheet to stout · fcd4d1de
  kohleman authored 12 years ago
  
  SVN: 27534
  fcd4d1de
Nov 06, 2012
- SP-357, BIS-242: Sample done including system tests. · 5297eae5
  felmer authored 12 years ago
  
  SVN: 27503
  5297eae5
Nov 01, 2012

Revert r27035 (rename ch.systemsx.cisd.common.exception back to... · f8c9d7f5

brinn authored 12 years ago

Revert r27035 (rename ch.systemsx.cisd.common.exception back to ch.systemsx.cisd.common.exceptions) as it breaks backward compatibility of the public APIs.

SVN: 27469

f8c9d7f5

Oct 31, 2012
- - changed SampleID from SAMPLE Code to the LIBRARY Code · 37566351
  kohleman authored 12 years ago
  
  - removed lanePrefix SVN: 27437
  37566351
Oct 22, 2012
- SP-334 SWE-14 fix the dependency structure · 9ad75fab
  jakubs authored 12 years ago
  
  SVN: 27312
  9ad75fab
Oct 19, 2012

- added log level to logger · f287b102

kohleman authored 12 years ago

- added missing openBIS properties in properties file
- added support for lane dependent de-multiplex command creation, creates a file with a command line call per lane including the correct base mask (needed for dual indexed runs which include single indexed libraries)
- created a main function instead of having a lot of global variables

SVN: 27244

f287b102

Oct 18, 2012
- added Novartis Sample Sheet Creator to the build.xml · ae126a7b
  kohleman authored 12 years ago
  
  SVN: 27237
  ae126a7b
- - added logout back in · 3f246377
  kohleman authored 12 years ago
  
  SVN: 27236
  3f246377
- - changed logger format to also log the log level · 3d37727b
  kohleman authored 12 years ago
  
  - completed to have all openBIS properties also as configurable variables in the properties file - added some debug logging SVN: 27235
  3d37727b
Oct 16, 2012
- CISDTT-30: Work Package 3: Sample Sheet Creation for Novartis NGS Master Data Schema. · 1f1bdeed
  kohleman authored 12 years ago
  
  SVN: 27199
  1f1bdeed
- - added logging · 0f057518
  kohleman authored 12 years ago
  
  - added make dir SVN: 27198
  0f057518
Oct 10, 2012
- Move IO related property helper methods from PropertyUtils to PropertyIOUtils. · d3a31aee
  brinn authored 12 years ago
  
  SVN: 27144
  d3a31aee