Commits · 12e1fb11ec6257a915852b69a1977901259e2f76 · sispub / openbis

Nov 20, 2014
- SSDM-1080: Add number of mismatch and total number of gaps and BLAST alignment... · f96d35fc
  felmer authored 10 years ago
  
  SSDM-1080: Add number of mismatch and total number of gaps and BLAST alignment positions to BLAST search results. SVN: 32886
  f96d35fc
- SSDM-1174: spelling error fixed: ByExpermientPolicy -> ByExperimentPolicy · d21583e9
  felmer authored 10 years ago
  
  SVN: 32885
  d21583e9
Nov 19, 2014
- SSDM-1194: add v3 api as a bean in dss · eac5236a
  jakubs authored 10 years ago
  
  SVN: 32881
  eac5236a
- SSDM-1174: filter on data sets with configured data set type · f8da89ae
  felmer authored 10 years ago
  
  SVN: 32874
  f8da89ae
- SSDM-1186: Log starting and finishing sanity check. · 75079300
  felmer authored 10 years ago
  
  SVN: 32867
  75079300
- SSDM-1012 Archivation policy by space. Adding test for one more case +... · 1836ef54
  jakubs authored 10 years ago
  
  SSDM-1012 Archivation policy by space. Adding test for one more case + implementation of the missing case. refactor shuffling to use contstant seed for consistency SVN: 32866
  1836ef54
Nov 18, 2014
- SSDM-1012 Archivation policy by space + refactoring of the experiment policy + unit tests · 2d83fea8
  jakubs authored 10 years ago
  
  SVN: 32863
  2d83fea8
- making tests more robust by suppressing log lines with 'FullTextIndex' in the logger name. · dbd3fb68
  felmer authored 10 years ago
  
  SVN: 32861
  dbd3fb68
- SSDM-1174: Making TagArchiveCandidateDiscoverer more robust. · 5aa4f085
  felmer authored 10 years ago
  
  SVN: 32860
  5aa4f085
- SSDM-1080: Add score and BLAST alignment positions to BLAST search results. · b35f3eed
  felmer authored 10 years ago
  
  SVN: 32858
  b35f3eed
- SSDM-1080: Rename IDataStoreService.searchForDataSetsWithSequences() ->... · 9bc25ae8
  felmer authored 10 years ago
  
  SSDM-1080: Rename IDataStoreService.searchForDataSetsWithSequences() -> IDataStoreService.searchForEntitiesWithSequences() SVN: 32857
  9bc25ae8
- SSDM-1075: BlastDatabaseCreationMaintenanceTask: Also data set and experiment properties handled. · 2108bab9
  felmer authored 10 years ago
  
  SVN: 32854
  2108bab9
Nov 17, 2014

SSDM-1012: comments for the classes · 5a889637
fedoreno authored 10 years ago
```
SVN: 32853
```
5a889637

SSDM-1080: Introducing EntityPropertySearchResultLocation and use it in... · 637cba21

felmer authored 10 years ago

SSDM-1080: Introducing EntityPropertySearchResultLocation and use it in BlastDatabase. Modify CommonServer and DataSetTable to load entities for doing the authorization filtering.

SVN: 32851

637cba21

SSDM-1075: BlastDatabaseCreationMaintenanceTask finished. Tests added to... · 81890caf

felmer authored 10 years ago

SSDM-1075: BlastDatabaseCreationMaintenanceTask finished. Tests added to BlastDatabaseCreationMaintenanceTaskTest. Removing whitespaces from sequences.

SVN: 32838

81890caf

Nov 14, 2014
- SSDM-1174 fix a bug, when very big data sets would not get selected by auto archiver · 180b75ed
  jakubs authored 10 years ago
  
  SVN: 32827
  180b75ed
Nov 12, 2014
- SSDM-1174 archival candidate discovery by tag · 795995ef
  fedoreno authored 10 years ago
  
  SVN: 32806
  795995ef
- SSDM-1174 not sorting candidates, just taking best one · fb035b25
  fedoreno authored 10 years ago
  
  SVN: 32805
  fb035b25
- SSDM-1075: Extending BlastDatabaseCreationMaintenanceTask started. FastaFileBuilder refactored. · dafbc3bd
  felmer authored 10 years ago
  
  SVN: 32802
  dafbc3bd
- SSDM-1174: Bug in ProjectGroupKeyProvider fixed. · 8ea684d2
  felmer authored 10 years ago
  
  SVN: 32799
  8ea684d2
- SSDM-1186 make sure the datasets are archived before removing them from scratch share · 4de5f07c
  jakubs authored 10 years ago
  
  SVN: 32796
  4de5f07c
- SSDM-1174: ByExperimentPolicy: Some renamings · 0a1bee84
  felmer authored 10 years ago
  
  SVN: 32794
  0a1bee84
- SSDM-1174: ByExperimentPolicy: Bugs fixed. Some refactorings. · bdc472a5
  felmer authored 10 years ago
  
  SVN: 32793
  bdc472a5
Nov 11, 2014
- SSDM-1174: byExperiment with a different logic · 9d9296c6
  fedoreno authored 10 years ago
  
  SVN: 32792
  9d9296c6
- SSDM-1174 refactoring. Replace Comparator with our SimpleComparator · e84d490b
  jakubs authored 10 years ago
  
  SVN: 32791
  e84d490b
- SSDM-1186 update access timestamp when unarchiving with multi data set archiver · 85ba7ea8
  jakubs authored 10 years ago
  
  SVN: 32784
  85ba7ea8
- SSDM-1186 use access timestamp to sort datasets for freeing space · d244c293
  jakubs authored 10 years ago
  
  SVN: 32780
  d244c293
- SSDM-1174 moved byExperment to conform to dependency rules · 6462e34d
  fedoreno authored 10 years ago
  
  SVN: 32774
  6462e34d
- SSDM-1174 reworked ByExperiment archiving policy with unit tests · 46f016f5
  fedoreno authored 10 years ago
  
  SVN: 32772
  46f016f5
- SSDM-1174 byExperiment is now a policy · fcaead9b
  fedoreno authored 10 years ago
  
  SVN: 32771
  fcaead9b
Nov 07, 2014
- reverting two commits without ticket information · f583756e
  fedoreno authored 10 years ago
  
  SVN: 32761
  f583756e
- Revert "first working ByExpermient archiver" · d1b10747
  fedoreno authored 10 years ago
  
  This reverts commit 92477d056c3abdbde4e6e052662d2f43b17f3c0c. SVN: 32760
  d1b10747
- SSDM-1010 rename multi dataset archiver db version holder · 0abc664b
  jakubs authored 10 years ago
  
  SVN: 32753
  0abc664b
Nov 05, 2014
- first working ByExpermient archiver · 3f4febfa
  fedoreno authored 10 years ago
  
  SVN: 32750
  3f4febfa
- first 2 autoarchivers (byExperiment not searching by isarchived attribute yet) · e6563832
  fedoreno authored 10 years ago
  
  SVN: 32749
  e6563832
- SSDM-1010: fixing broken MultiDataSetArchiverTest.testUnarchive() · 545aca4c
  felmer authored 10 years ago
  
  SVN: 32738
  545aca4c
- SSDM-1010: better log message, UserFailureException instead of... · 77a7d278
  felmer authored 10 years ago
  
  SSDM-1010: better log message, UserFailureException instead of IllegalArgumentException if chosen data sets from different containers. SVN: 32737
  77a7d278
- SSDM-1010: fixing broken MultiDataSetArchiverTest.testUnarchive() · 7eac3861
  felmer authored 10 years ago
  
  SVN: 32734
  7eac3861
- SSDM-1010: Add archiving status attribute to SimpleDataSetInformationDTO. Use... · 721bc60c
  felmer authored 10 years ago
  
  SSDM-1010: Add archiving status attribute to SimpleDataSetInformationDTO. Use it in SegmentedStoreUtils.freeSpace() to filter out the unavailable data sets in unarchiving scratch share. SVN: 32732
  721bc60c
- SSDM-1010: removing class MultiDataSetArchiverShareFinder · b4a25463
  felmer authored 10 years ago
  
  SVN: 32728
  b4a25463