LMS-1506 Modified IDataStoreService: Provide parameters binding with default...

LMS-1506 Modified IDataStoreService: Provide parameters binding with default parameter 'user' for processing tasks

SVN: 15765

deep_sequencing_unit/source/java/ch/ethz/bsse/cisd/dsu/dss/FlowLaneFeeder.java

@@ -145,7 +145,7 @@ class FlowLaneFeeder extends AbstractPostRegistrationDataSetHandlerForFileBasedU
         }
     }
 
-    public Status handle(File originalData, DataSetInformation dataSetInformation)
+    public Status handle(File originalData, DataSetInformation dataSetInformation, Map<String, String> parameterBindings)
     {
         Map<String, Sample> flowLaneSampleMap = createFlowLaneSampleMap(dataSetInformation);
         String flowcellID = originalData.getName();

deep_sequencing_unit/sourceTest/java/ch/ethz/bsse/cisd/dsu/dss/FlowLaneFeederTest.java

@@ -155,7 +155,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
 
         try
         {
-            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO);
+            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO, null);
             fail("UserFailureException expected");
         } catch (UserFailureException ex)
         {
@@ -177,7 +177,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
 
         try
         {
-            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO);
+            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO, null);
             fail("ConfigurationFailureException expected");
         } catch (ConfigurationFailureException ex)
         {
@@ -195,7 +195,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
 
         try
         {
-            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO);
+            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO, null);
             fail("UserFailureException expected");
         } catch (UserFailureException ex)
         {
@@ -226,7 +226,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
 
         try
         {
-            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO);
+            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO, null);
             fail("EnvironmentFailureException expected");
         } catch (EnvironmentFailureException ex)
         {
@@ -258,7 +258,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
         
         try
         {
-            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO);
+            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO, null);
             fail("UserFailureException expected");
         } catch (UserFailureException ex)
         {
@@ -289,7 +289,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
         prepareListFlowLanes(EXAMPLE_FLOW_CELL_SAMPLE, Arrays.asList(fl1, fl2));
         prepareGetProperties(Arrays.asList(fl1, fl2));
 
-        flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO);
+        flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO, null);
 
         checkFlowLaneDataSet(originalFlowLane1, "1");
         checkFlowLaneDataSet(originalFlowLane2, "2");
@@ -328,7 +328,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
         prepareListFlowLanes(EXAMPLE_FLOW_CELL_SAMPLE, Arrays.asList(fl1, fl2));
         prepareGetProperties(Arrays.asList(fl1, fl2));
 
-        flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO);
+        flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO, null);
 
         checkFlowLaneDataSet(originalFlowLane1, "1");
         checkFlowLaneDataSet(originalFlowLane2, "2");
@@ -367,7 +367,7 @@ public class FlowLaneFeederTest extends AbstractFileSystemTestCase
 
         try
         {
-            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO);
+            flowLaneFeeder.handle(flowCell, EXAMPLE_DATA_SET_INFO, null);
             fail("UserFailureException expected");
         } catch (UserFailureException ex)
         {