change: use streaming in HDF5Container to write file content to the container...
change: use streaming in HDF5Container to write file content to the container (avoid OutOfMemoryError on very large files when creating the HDF5 container) SVN: 22392
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- common/source/java/ch/systemsx/cisd/common/hdf5/HDF5Container.java 11 additions, 40 deletions...urce/java/ch/systemsx/cisd/common/hdf5/HDF5Container.java
- common/source/java/ch/systemsx/cisd/common/hdf5/HDF5ContainerReader.java 91 additions, 0 deletions...ava/ch/systemsx/cisd/common/hdf5/HDF5ContainerReader.java
- common/source/java/ch/systemsx/cisd/common/hdf5/HDF5ContainerWriter.java 110 additions, 0 deletions...ava/ch/systemsx/cisd/common/hdf5/HDF5ContainerWriter.java
- common/source/java/ch/systemsx/cisd/common/hdf5/HierarchicalStructureDuplicatorFileToHDF5.java 27 additions, 10 deletions...ommon/hdf5/HierarchicalStructureDuplicatorFileToHDF5.java
- common/source/java/ch/systemsx/cisd/common/hdf5/IHDF5ContainerReader.java 3 additions, 3 deletions...va/ch/systemsx/cisd/common/hdf5/IHDF5ContainerReader.java
- common/source/java/ch/systemsx/cisd/common/hdf5/IHDF5ContainerWriter.java 12 additions, 6 deletions...va/ch/systemsx/cisd/common/hdf5/IHDF5ContainerWriter.java
- common/source/java/ch/systemsx/cisd/common/io/HDF5DataSetBasedContent.java 2 additions, 1 deletion...a/ch/systemsx/cisd/common/io/HDF5DataSetBasedContent.java
- common/source/java/ch/systemsx/cisd/common/io/hierarchical_content/HDF5ContainerBasedHierarchicalContentNode.java 6 additions, 6 deletions...al_content/HDF5ContainerBasedHierarchicalContentNode.java
- common/sourceTest/java/ch/systemsx/cisd/common/hdf5/FileToHDF5DuplicationVerifier.java 15 additions, 12 deletions...temsx/cisd/common/hdf5/FileToHDF5DuplicationVerifier.java
- common/sourceTest/java/ch/systemsx/cisd/common/hdf5/HDF5ContainerTest.java 182 additions, 0 deletions.../java/ch/systemsx/cisd/common/hdf5/HDF5ContainerTest.java
- common/sourceTest/java/ch/systemsx/cisd/common/hdf5/HierarchicalStructureDuplicatorFileToHDF5Test 13 additions, 13 deletions...common/hdf5/HierarchicalStructureDuplicatorFileToHDF5Test
- common/sourceTest/java/ch/systemsx/cisd/common/io/hierarchical_content/DefaultFileBasedHierarchicalContentTest.java 8 additions, 7 deletions...ical_content/DefaultFileBasedHierarchicalContentTest.java
- datastore_server/source/java/ch/systemsx/cisd/etlserver/hdf5/HDF5StorageProcessor.java 12 additions, 12 deletions...ch/systemsx/cisd/etlserver/hdf5/HDF5StorageProcessor.java
- datastore_server/sourceTest/java/ch/systemsx/cisd/etlserver/hdf5/AbstractHDF5StorageProcessorTest.java 14 additions, 14 deletions...cisd/etlserver/hdf5/AbstractHDF5StorageProcessorTest.java
- datastore_server/sourceTest/java/ch/systemsx/cisd/etlserver/hdf5/HDF5StorageProcessorNoCompressionTest.java 2 additions, 2 deletions...etlserver/hdf5/HDF5StorageProcessorNoCompressionTest.java
- datastore_server/sourceTest/java/ch/systemsx/cisd/etlserver/hdf5/HDF5StorageProcessorWithCompressionTest.java 3 additions, 3 deletions...lserver/hdf5/HDF5StorageProcessorWithCompressionTest.java
- screening/source/java/ch/systemsx/cisd/openbis/dss/etl/AbstractImageStorageProcessor.java 5 additions, 5 deletions...x/cisd/openbis/dss/etl/AbstractImageStorageProcessor.java
- screening/source/java/ch/systemsx/cisd/openbis/dss/etl/Hdf5ThumbnailGenerator.java 5 additions, 3 deletions...systemsx/cisd/openbis/dss/etl/Hdf5ThumbnailGenerator.java
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