bugfix for controlled vocabulary, html table for openbis object

pybis/src/python/pybis/property.py

@@ -59,8 +59,9 @@ class PropertyHolder():
         data_type = property_type['dataType']
         if data_type == 'CONTROLLEDVOCABULARY':
             voc = self._openbis.get_terms(name)
-            if value not in voc.terms:
-                raise ValueError("Value must be one of these terms: " + ", ".join(voc.terms))
+            value = value.upper()
+            if value not in voc.df['code'].values:
+                raise ValueError("Value must be one of these terms: " + ", ".join(voc.df['code'].values))
         elif data_type in ('INTEGER', 'BOOLEAN', 'VARCHAR'):
             if not check_datatype(data_type, value):
                 raise ValueError("Value must be of type {}".format(data_type))

pybis/src/python/pybis/pybis.py

@@ -460,6 +460,7 @@ def _subcriteria_for_code(code, object_type):
         return get_search_type_for_entity(object_type.lower())
 
 
+
 class Openbis:
     """Interface for communicating with openBIS. 
     A recent version of openBIS is required (minimum 16.05.2).
@@ -581,6 +582,31 @@ class Openbis:
             'update_object(sampleId, space, project, experiment, parents, children, components, properties, tagIds, attachments)', # 'update_sample(sampleId, space, project, experiment, parents, children, components, properties, tagIds, attachments)' alias
         ]
 
+    def _repr_html_(self):
+        html = """
+            <table border="1" class="dataframe">
+            <thead>
+                <tr style="text-align: right;">
+                <th>attribute</th>
+                <th>value</th>
+                </tr>
+            </thead>
+            <tbody>
+        """
+
+        attrs = ['url', 'port', 'hostname', 'verify_certificates', 'as_v3', 'as_v1', 'reg_v1', 'token']
+        for attr in attrs:
+            html += "<tr> <td>{}</td> <td>{}</td> </tr>".format(
+                attr, getattr(self, attr, '')
+            )
+
+        html += """
+            </tbody>
+            </table>
+        """
+        return html
+
+
     @property
     def spaces(self):
         return self.get_spaces()