LMS-478 rename 'openbis' -> 'openbis_all'

SVN: 8174

openbis_all/.classpath

+<?xml version="1.0" encoding="UTF-8"?>
+<classpath>
+	<classpathentry kind="src" path="source/java"/>
+	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/authentication"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/bds"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/common"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/dataset_download"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/dbmigration"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/etlserver"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/lims"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/lims_base"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/lims_webclient"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/args4j"/>
+	<classpathentry kind="output" path="targets/classes"/>
+</classpath>

openbis_all/.project

+<?xml version="1.0" encoding="UTF-8"?>
+<projectDescription>
+	<name>openbis</name>
+	<comment></comment>
+	<projects>
+	</projects>
+	<buildSpec>
+		<buildCommand>
+			<name>org.eclipse.jdt.core.javabuilder</name>
+			<arguments>
+			</arguments>
+		</buildCommand>
+	</buildSpec>
+	<natures>
+		<nature>org.eclipse.jdt.core.javanature</nature>
+	</natures>
+</projectDescription>

openbis_all/build/build.xml

+<project name="openbis" default="dist" basedir="..">
+	<import file="../../build_resources/ant/build-common.xml" />
+
+	<property name="result.dir" value="${targets}/dist" />
+
+	<target name="dist">
+		<exec executable="ant" failonerror="true">
+			<arg value="-lib"/>
+			<arg value="../build_resources/lib/ecj.jar"/>
+			<arg value="-f"/>
+			<arg value="../lims_webclient/build/build.xml"/>
+			<arg value="dist"/>
+		</exec>
+		<copy todir="${result.dir}">
+			<fileset dir="../lims_webclient/${dist}"/>
+		</copy>
+		<exec executable="ant" failonerror="true">
+			<arg value="-lib"/>
+			<arg value="../build_resources/lib/ecj.jar"/>
+			<arg value="-f"/>
+			<arg value="../etlserver/build/build.xml"/>
+			<arg value="dist"/>
+		</exec>
+		<copy todir="${result.dir}">
+			<fileset dir="../etlserver/${dist}"/>
+		</copy>
+		<exec executable="ant" failonerror="true">
+			<arg value="-lib"/>
+			<arg value="../build_resources/lib/ecj.jar"/>
+			<arg value="-f"/>
+			<arg value="../dataset_download/build/build.xml"/>
+			<arg value="dist"/>
+		</exec>
+		<copy todir="${result.dir}">
+			<fileset dir="../dataset_download/${dist}"/>
+		</copy>
+	</target>
+
+	<target name="clean">
+		<delete dir="${dist}" />
+		<exec executable="ant" failonerror="true">
+			<arg value="-lib"/>
+			<arg value="../build_resources/lib/ecj.jar"/>
+			<arg value="-f"/>
+			<arg value="../lims_webclient/build/build.xml"/>
+			<arg value="clean"/>
+		</exec>
+		<exec executable="ant" failonerror="true">
+			<arg value="-lib"/>
+			<arg value="../build_resources/lib/ecj.jar"/>
+			<arg value="-f"/>
+			<arg value="../etlserver/build/build.xml"/>
+			<arg value="clean"/>
+		</exec>
+		<exec executable="ant" failonerror="true">
+			<arg value="-lib"/>
+			<arg value="../build_resources/lib/ecj.jar"/>
+			<arg value="-f"/>
+			<arg value="../dataset_download/build/build.xml"/>
+			<arg value="clean"/>
+		</exec>
+	</target>
+
+</project>
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openbis_all/source/bash/sprint_install.sh

+#!/bin/bash
+# Performs the sprint components installation.
+# This script assumes that you already are on the sprint server and must be run from that place
+# in the home directory.
+
+if [ $# -lt 1 ]; then
+    echo "Usage: $0 <sprint number>"
+    exit 1
+fi
+
+VER=$1
+PREV_VER=$(( $VER - 1 ))
+DB_SNAPSHOT=db_snapshots/sprint$PREV_VER-lims_productive.sql
+
+echo Stopping the components...
+./sprint/openBIS-server/apache-tomcat/bin/shutdown.sh
+./sprint/download-server/download-service.sh stop
+
+echo Making a database dump...
+pg_dump -U postgres -O lims_productive > $DB_SNAPSHOT
+tar -cf - $DB_SNAPSHOT | bzip2 >db_snapshots/sprint$PREV_VER-lims_productive.tar.bz2
+rm -f $DB_SNAPSHOT
+
+echo Installing openBIS server...
+mv sprint-$PREV_VER old
+rm sprint
+mkdir sprint-$VER
+ln -s sprint-$VER sprint
+cd sprint
+unzip ../openBIS-server-S$VER*
+cd openBIS-server
+./install.sh $PWD ../../service.properties
+
+echo Installing download server...
+cd ..
+unzip ../download-server-S$VER* 
+cd download-server
+cp ~/old/sprint-$PREV_VER/download-server/etc/service.properties etc/
+chmod 700 download-service.sh
+export JAVA_HOME=/usr
+./download-service.sh start
+
+echo Doing some cleaning...
+cd
+mv *.zip tmp
+
+echo Done!
\ No newline at end of file

openbis_all/source/bash/tag_and_build.sh

+#!/bin/bash
+# Tags, builds the software components, uploads them to sprint server 
+# and places a copy of them on the sprint server ready for installation. 
+#
+# This script assumes that you have a SSH access on 'sprint-openbis.ethz.ch' 
+# and 'cisd-vesuvio.ethz.ch'. This is typically configured in the SSH config file.
+
+if [ $# -lt 1 ]; then
+    echo "Usage: $0 <sprint number> [subversion]"
+    exit 1
+fi
+
+TODAY=`date "+%Y-%m-%d"`
+VER=$1
+SUBVER=0
+if [ $2 ]; then
+	SUBVER=$2
+fi
+FULL_VER=S$VER.$SUBVER
+SPRINT_SERVER=sprint-openbis.ethz.ch
+CISD_SERVER=cisd-vesuvio.ethz.ch
+SPRINT_INSTALL_SCRIPT=sprint_install.sh
+
+svn checkout svn+ssh://source.systemsx.ch/repos/cisd/build_resources/trunk build_resources
+cd build_resources
+echo Tagging openBIS to $FULL_VER...
+./tag_sprint.sh openbis $FULL_VER
+echo Building openBIS...
+./build.sh openbis $FULL_VER
+
+echo Copying new openBIS components to \'$CISD_SERVER\'...
+OPENBIS_PATH=/localhome/cisd/sprint_builds/openBIS
+SPRINT_DIR=$OPENBIS_PATH/$TODAY-$FULL_VER
+echo "mkdir -p $SPRINT_DIR"  | ssh -T $CISD_SERVER
+scp *.zip $CISD_SERVER:$SPRINT_DIR
+
+echo Copying new openBIS components to \'$SPRINT_SERVER\'...
+scp openBIS-server-*.zip $SPRINT_SERVER:.
+scp download-server-*.zip $SPRINT_SERVER:.
+
+# If sprint install script is present and executable, run it!
+if [ -x $SPRINT_INSTALL_SCRIPT ]; then
+    echo Installing server remotely...
+    cat $SPRINT_INSTALL_SCRIPT | ssh -T $SPRINT_SERVER "cat > ~/$SPRINT_INSTALL_SCRIPT ; chmod 755 ~/$SPRINT_INSTALL_SCRIPT ; ~/$SPRINT_INSTALL_SCRIPT $VER ; rm -f ~/$SPRINT_INSTALL_SCRIPT"
+fi
+
+echo Done!
\ No newline at end of file