SE-114 ETL process extended. Server side of query implemented.

...ystemsx/cisd/openbis/etlserver/phosphonetx/Constants.java

...systemsx/cisd/openbis/etlserver/phosphonetx/IProtDAO.java

...d/openbis/etlserver/phosphonetx/ResultDataSetHandler.java

...sd/openbis/etlserver/phosphonetx/dto/ASAPRatioPValue.java

.../openbis/etlserver/phosphonetx/dto/AbstractDTOWithID.java

...etlserver/phosphonetx/dto/AbstractDTOWithIDAndPermID.java

...d/openbis/etlserver/phosphonetx/dto/AnnotatedProtein.java

...temsx/cisd/openbis/etlserver/phosphonetx/dto/DataSet.java

...sx/cisd/openbis/etlserver/phosphonetx/dto/Experiment.java

...d/openbis/etlserver/phosphonetx/dto/ModificationType.java

...temsx/cisd/openbis/etlserver/phosphonetx/dto/Peptide.java

...penbis/etlserver/phosphonetx/dto/PeptideModification.java

...temsx/cisd/openbis/etlserver/phosphonetx/dto/Protein.java

.../cisd/openbis/etlserver/phosphonetx/dto/ProteinGroup.java

...nbis/etlserver/phosphonetx/dto/ProteinProphetDetails.java

...isd/openbis/etlserver/phosphonetx/dto/ProteinSummary.java

...enbis/etlserver/phosphonetx/dto/ProteinSummaryHeader.java

...stemsx/cisd/openbis/etlserver/phosphonetx/dto/Sample.java

...emsx/cisd/openbis/etlserver/phosphonetx/dto/Sequence.java

...sphonetx/client/web/client/IPhosphoNetXClientService.java