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Commit 1e4f3a78 authored by tpylak's avatar tpylak
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LMS-2335, LMS-2346 remove old test data

SVN: 21962
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inputs = hcs_image_raw, hcs_image_overview, hcs_image_segmentation, hcs_analysis_well_features, hcs_analysis_well_quality, hcs_analysis_cell_features_csv, hcs_analysis_cell_features_mat
root = ~/data/dropboxes
ibrain2-dropboxes-dir = ${root}/incoming
staging-dir = ${root}/tmp
scripts-dir = ${root}/scripts
# --- hcs_image_raw ------------
hcs_image_raw.incoming-dir = ${ibrain2-dropboxes-dir}/hcs_image_raw
hcs_image_raw.script-path = ${scripts-dir}/hcs_image_raw.py
hcs_image_raw.incoming-data-completeness-condition = auto-detection
hcs_image_raw.top-level-data-set-handler = ch.systemsx.cisd.openbis.dss.etl.jython.JythonPlateDataSetHandler
hcs_image_raw.staging-dir = ${staging-dir}
hcs_image_raw.storage-processor = ch.systemsx.cisd.openbis.dss.etl.PlateStorageProcessor
hcs_image_raw.storage-processor.data-source = imaging-db
# --- hcs_image_overview
hcs_image_overview.incoming-dir = ${ibrain2-dropboxes-dir}/hcs_image_overview
hcs_image_overview.script-path = ${scripts-dir}/hcs_image_overview.py
hcs_image_overview.incoming-data-completeness-condition = auto-detection
hcs_image_overview.top-level-data-set-handler = ch.systemsx.cisd.openbis.dss.etl.jython.JythonPlateDataSetHandler
hcs_image_overview.staging-dir = ${staging-dir}
hcs_image_overview.storage-processor = ch.systemsx.cisd.openbis.dss.etl.PlateStorageProcessor
hcs_image_overview.storage-processor.data-source = imaging-db
# --- hcs_image_segmentation
hcs_image_segmentation.incoming-dir = ${ibrain2-dropboxes-dir}/hcs_image_segmentation
hcs_image_segmentation.script-path = ${scripts-dir}/hcs_image_segmentation.py
hcs_image_segmentation.incoming-data-completeness-condition = auto-detection
hcs_image_segmentation.top-level-data-set-handler = ch.systemsx.cisd.openbis.dss.etl.jython.JythonPlateDataSetHandler
hcs_image_segmentation.staging-dir = ${staging-dir}
hcs_image_segmentation.storage-processor = ch.systemsx.cisd.openbis.dss.etl.PlateStorageProcessor
hcs_image_segmentation.storage-processor.data-source = imaging-db
# --- hcs_analysis_cell_features_csv
hcs_analysis_cell_features_csv.incoming-dir = ${ibrain2-dropboxes-dir}/hcs_analysis_cell_features_csv
hcs_analysis_cell_features_csv.script-path = ${scripts-dir}/hcs_analysis_cell_features_csv.py
hcs_analysis_cell_features_csv.incoming-data-completeness-condition = auto-detection
hcs_analysis_cell_features_csv.top-level-data-set-handler = ch.systemsx.cisd.etlserver.registrator.JythonTopLevelDataSetHandler
hcs_analysis_cell_features_csv.storage-processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor
hcs_analysis_cell_features_csv.staging-dir = ${staging-dir}
# --- hcs_analysis_cell_features_mat
hcs_analysis_cell_features_mat.incoming-dir = ${ibrain2-dropboxes-dir}/hcs_analysis_cell_features_mat
hcs_analysis_cell_features_mat.script-path = ${scripts-dir}/hcs_analysis_cell_features_mat.py
hcs_analysis_cell_features_mat.incoming-data-completeness-condition = auto-detection
hcs_analysis_cell_features_mat.top-level-data-set-handler = ch.systemsx.cisd.etlserver.registrator.JythonTopLevelDataSetHandler
hcs_analysis_cell_features_mat.storage-processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor
hcs_analysis_cell_features_mat.staging-dir = ${staging-dir}
# --- hcs_analysis_well_quality -----------
hcs_analysis_well_quality.incoming-dir = ${ibrain2-dropboxes-dir}/hcs_analysis_well_quality
hcs_analysis_well_quality.script-path = ${scripts-dir}/hcs_analysis_well_quality.py
hcs_analysis_well_quality.incoming-data-completeness-condition = auto-detection
hcs_analysis_well_quality.top-level-data-set-handler = ch.systemsx.cisd.openbis.dss.etl.jython.JythonPlateDataSetHandler
hcs_analysis_well_quality.staging-dir = ${staging-dir}
hcs_analysis_well_quality.storage-processor = ch.systemsx.cisd.openbis.dss.etl.featurevector.FeatureVectorStorageProcessor
hcs_analysis_well_quality.storage-processor.processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor
hcs_analysis_well_quality.storage-processor.data-source = imaging-db
# --- hcs_analysis_well_features -----------
hcs_analysis_well_features.incoming-dir = ${ibrain2-dropboxes-dir}/hcs_analysis_well_features
hcs_analysis_well_features.script-path = ${scripts-dir}/hcs_analysis_well_features.py
hcs_analysis_well_features.incoming-data-completeness-condition = auto-detection
hcs_analysis_well_features.top-level-data-set-handler = ch.systemsx.cisd.openbis.dss.etl.jython.JythonPlateDataSetHandler
hcs_analysis_well_features.staging-dir = ${staging-dir}
hcs_analysis_well_features.storage-processor = ch.systemsx.cisd.openbis.dss.etl.featurevector.FeatureVectorStorageProcessor
hcs_analysis_well_features.storage-processor.processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor
hcs_analysis_well_features.storage-processor.data-source = imaging-db
# --- hcs_analysis_well_metadata -----------
#hcs_analysis_well_metadata.incoming-dir = ${ibrain2-dropboxes-dir}/hcs_analysis_well_metadata
#hcs_analysis_well_metadata.script-path = ${scripts-dir}/hcs_analysis_well_metadata.py
#hcs_analysis_well_metadata.incoming-data-completeness-condition = auto-detection
#hcs_analysis_well_metadata.top-level-data-set-handler = ch.systemsx.cisd.openbis.dss.etl.jython.JythonPlateDataSetHandler
#hcs_analysis_well_metadata.staging-dir = ${staging-dir}
#hcs_analysis_well_metadata.storage-processor = ch.systemsx.cisd.openbis.dss.etl.featurevector.FeatureVectorStorageProcessor
#hcs_analysis_well_metadata.storage-processor.processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor
#hcs_analysis_well_metadata.storage-processor.data-source = imaging-db
storage_provider.parent.dataset.id = 20110315102448498-198
ibrain2.parent.dataset.id = 32
ibrain2.dataset.id = 58
dataset.type = HCS_ANALYSIS_CELL_FEATURES_MAT
ibrain2.workflow.id = 23
ibrain2.module.order = 10
ibrain2.process.id = 42
\ No newline at end of file
storage_provider.parent.dataset.id = 20110315102448498-198
ibrain2.parent.dataset.id = 32
ibrain2.dataset.id = 55
dataset.type = HCS_ANALYSIS_WELL_ACQUISITION_METADATA
ibrain2.workflow.id = 23
ibrain2.module.order = 8
ibrain2.process.id = 42
\ No newline at end of file
storage_provider.parent.dataset.id = 20110315102448498-198
ibrain2.parent.dataset.id = 32
ibrain2.dataset.id = 47
dataset.type = HCS_ANALYSIS_WELL_QUALITY
ibrain2.workflow.id = 23
ibrain2.module.order = 2
ibrain2.process.id = 42
\ No newline at end of file
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