Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
O
openbis
Manage
Activity
Members
Labels
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Model registry
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
sispub
openbis
Commits
15de7028
Commit
15de7028
authored
9 years ago
by
felmer
Browse files
Options
Downloads
Patches
Plain Diff
SSDM-2601: finished rewriting ProjectSampleTest for clean-db suite
SVN: 35026
parent
e0edc251
No related branches found
No related tags found
No related merge requests found
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/api/v3/ProjectSampleTest.java
+36
-33
36 additions, 33 deletions
...ethz/sis/openbis/systemtest/api/v3/ProjectSampleTest.java
with
36 additions
and
33 deletions
openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/api/v3/ProjectSampleTest.java
+
36
−
33
View file @
15de7028
...
@@ -29,6 +29,7 @@ import java.util.Map;
...
@@ -29,6 +29,7 @@ import java.util.Map;
import
org.apache.log4j.Logger
;
import
org.apache.log4j.Logger
;
import
org.springframework.beans.factory.annotation.Autowired
;
import
org.springframework.beans.factory.annotation.Autowired
;
import
org.springframework.test.context.transaction.AfterTransaction
;
import
org.springframework.test.context.transaction.TransactionConfiguration
;
import
org.springframework.test.context.transaction.TransactionConfiguration
;
import
org.springframework.transaction.annotation.Propagation
;
import
org.springframework.transaction.annotation.Propagation
;
import
org.springframework.transaction.annotation.Transactional
;
import
org.springframework.transaction.annotation.Transactional
;
...
@@ -62,7 +63,6 @@ import ch.systemsx.cisd.common.exceptions.UserFailureException;
...
@@ -62,7 +63,6 @@ import ch.systemsx.cisd.common.exceptions.UserFailureException;
import
ch.systemsx.cisd.common.logging.LogCategory
;
import
ch.systemsx.cisd.common.logging.LogCategory
;
import
ch.systemsx.cisd.common.logging.LogFactory
;
import
ch.systemsx.cisd.common.logging.LogFactory
;
import
ch.systemsx.cisd.openbis.generic.server.dataaccess.util.UpdateUtils
;
import
ch.systemsx.cisd.openbis.generic.server.dataaccess.util.UpdateUtils
;
import
ch.systemsx.cisd.openbis.generic.shared.basic.dto.Space
;
import
ch.systemsx.cisd.openbis.systemtest.base.BaseTest
;
import
ch.systemsx.cisd.openbis.systemtest.base.BaseTest
;
/**
/**
...
@@ -74,6 +74,8 @@ import ch.systemsx.cisd.openbis.systemtest.base.BaseTest;
...
@@ -74,6 +74,8 @@ import ch.systemsx.cisd.openbis.systemtest.base.BaseTest;
@Test
(
groups
=
"project-samples"
)
@Test
(
groups
=
"project-samples"
)
public
class
ProjectSampleTest
extends
BaseTest
public
class
ProjectSampleTest
extends
BaseTest
{
{
private
static
final
String
[]
SEARCH_METHODS
=
{
"testSearchForSamplesWithProject"
,
"testSearchForSamplesWithCodeAndWithProject"
};
private
static
final
Logger
operationLog
=
LogFactory
.
getLogger
(
LogCategory
.
OPERATION
,
ProjectSampleTest
.
class
);
private
static
final
Logger
operationLog
=
LogFactory
.
getLogger
(
LogCategory
.
OPERATION
,
ProjectSampleTest
.
class
);
private
static
final
EntityTypePermId
ENTITY_TYPE_UNKNOWN
=
new
EntityTypePermId
(
"UNKNOWN"
);
private
static
final
EntityTypePermId
ENTITY_TYPE_UNKNOWN
=
new
EntityTypePermId
(
"UNKNOWN"
);
private
static
final
String
TEST_USER
=
"test"
;
private
static
final
String
TEST_USER
=
"test"
;
...
@@ -101,9 +103,8 @@ public class ProjectSampleTest extends BaseTest
...
@@ -101,9 +103,8 @@ public class ProjectSampleTest extends BaseTest
private
SamplePermId
sample2InSpace1
;
private
SamplePermId
sample2InSpace1
;
@BeforeClass
@BeforeClass
public
void
create
SpacesAndProject
()
public
void
create
Data
()
{
{
System
.
err
.
println
(
"create spaces"
);
List
<
SpacePermId
>
spaces
=
createSpaces
(
systemSessionToken
,
"SPACE1"
,
"SPACE2"
);
List
<
SpacePermId
>
spaces
=
createSpaces
(
systemSessionToken
,
"SPACE1"
,
"SPACE2"
);
space1
=
spaces
.
get
(
0
);
space1
=
spaces
.
get
(
0
);
space2
=
spaces
.
get
(
1
);
space2
=
spaces
.
get
(
1
);
...
@@ -112,13 +113,6 @@ public class ProjectSampleTest extends BaseTest
...
@@ -112,13 +113,6 @@ public class ProjectSampleTest extends BaseTest
project2inSpace1
=
projects
.
get
(
1
);
project2inSpace1
=
projects
.
get
(
1
);
project1InSpace2
=
createProjects
(
systemSessionToken
,
space2
,
"PROJECT1"
).
get
(
0
);
project1InSpace2
=
createProjects
(
systemSessionToken
,
space2
,
"PROJECT1"
).
get
(
0
);
project2InSpace2
=
createProjects
(
systemSessionToken
,
space2
,
"PROJECT2"
).
get
(
0
);
project2InSpace2
=
createProjects
(
systemSessionToken
,
space2
,
"PROJECT2"
).
get
(
0
);
}
@BeforeMethod
@Test
(
enabled
=
false
)
public
void
createTestEntities
()
{
System
.
err
.
println
(
"create testentities"
);
experimentInProject1InSpace1
=
createExperiments
(
systemSessionToken
,
project1inSpace1
,
"EXP1"
).
get
(
0
);
experimentInProject1InSpace1
=
createExperiments
(
systemSessionToken
,
project1inSpace1
,
"EXP1"
).
get
(
0
);
List
<
SamplePermId
>
sharedSamples
=
createSamples
(
systemSessionToken
,
null
,
null
,
null
,
"SHARED1"
,
"SHARED2"
);
List
<
SamplePermId
>
sharedSamples
=
createSamples
(
systemSessionToken
,
null
,
null
,
null
,
"SHARED1"
,
"SHARED2"
);
sharedSample1
=
sharedSamples
.
get
(
0
);
sharedSample1
=
sharedSamples
.
get
(
0
);
...
@@ -127,18 +121,18 @@ public class ProjectSampleTest extends BaseTest
...
@@ -127,18 +121,18 @@ public class ProjectSampleTest extends BaseTest
sample1InSpace1
=
spaceSamples
.
get
(
0
);
sample1InSpace1
=
spaceSamples
.
get
(
0
);
sample2InSpace1
=
spaceSamples
.
get
(
1
);
sample2InSpace1
=
spaceSamples
.
get
(
1
);
createSamples
(
systemSessionToken
,
space1
,
project1inSpace1
,
null
,
"SAMPLE3"
,
"SAMPLE4"
);
createSamples
(
systemSessionToken
,
space1
,
project1inSpace1
,
null
,
"SAMPLE3"
,
"SAMPLE4"
);
createSamples
(
systemSessionToken
,
space2
,
project2InSpace2
,
null
,
"SAMPLE5"
,
"SAMPLE6"
);
waitAtLeastASecond
();
// to allow checks on modification time stamps
waitAtLeastASecond
();
// to allow checks on modification time stamps
UpdateUtils
.
waitUntilIndexUpdaterIsIdle
(
applicationContext
,
operationLog
);
UpdateUtils
.
waitUntilIndexUpdaterIsIdle
(
applicationContext
,
operationLog
);
System
.
err
.
println
(
"Test data created"
);
}
}
@Override
@Override
@AfterTransaction
@Test
(
enabled
=
false
)
@Test
(
enabled
=
false
)
public
void
cleanDatabase
()
public
void
cleanDatabase
()
{
{
super
.
cleanDatabase
();
}
}
private
List
<
SpacePermId
>
createSpaces
(
String
sessionToken
,
String
...
spaceCodes
)
private
List
<
SpacePermId
>
createSpaces
(
String
sessionToken
,
String
...
spaceCodes
)
{
{
List
<
SpaceCreation
>
newSpaces
=
new
ArrayList
<
SpaceCreation
>();
List
<
SpaceCreation
>
newSpaces
=
new
ArrayList
<
SpaceCreation
>();
...
@@ -479,9 +473,10 @@ public class ProjectSampleTest extends BaseTest
...
@@ -479,9 +473,10 @@ public class ProjectSampleTest extends BaseTest
+
"(Context: [verify project for sample SHARED1])"
);
+
"(Context: [verify project for sample SHARED1])"
);
}
}
@Test
@Test
(
priority
=
-
1
)
public
void
testSearchForSamplesWithProject
()
throws
InterruptedException
public
void
testSearchForSamplesWithProject
()
throws
InterruptedException
{
{
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
searchCriteria
.
withProject
();
searchCriteria
.
withProject
();
SampleFetchOptions
fetchOptions
=
new
SampleFetchOptions
();
SampleFetchOptions
fetchOptions
=
new
SampleFetchOptions
();
...
@@ -493,10 +488,14 @@ public class ProjectSampleTest extends BaseTest
...
@@ -493,10 +488,14 @@ public class ProjectSampleTest extends BaseTest
assertEquals
(
result
.
getObjects
().
get
(
0
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1"
);
assertEquals
(
result
.
getObjects
().
get
(
0
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1"
);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1/SAMPLE4"
);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1/SAMPLE4"
);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1"
);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1"
);
assertEquals
(
result
.
getTotalCount
(),
2
);
assertEquals
(
result
.
getObjects
().
get
(
2
).
getIdentifier
().
getIdentifier
(),
"/SPACE2/PROJECT2/SAMPLE5"
);
assertEquals
(
result
.
getObjects
().
get
(
2
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE2/PROJECT2"
);
assertEquals
(
result
.
getObjects
().
get
(
3
).
getIdentifier
().
getIdentifier
(),
"/SPACE2/PROJECT2/SAMPLE6"
);
assertEquals
(
result
.
getObjects
().
get
(
3
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE2/PROJECT2"
);
assertEquals
(
result
.
getTotalCount
(),
4
);
}
}
@Test
@Test
(
priority
=
-
1
)
public
void
testSearchForSamplesWithCodeAndWithProject
()
public
void
testSearchForSamplesWithCodeAndWithProject
()
{
{
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
...
@@ -512,54 +511,58 @@ public class ProjectSampleTest extends BaseTest
...
@@ -512,54 +511,58 @@ public class ProjectSampleTest extends BaseTest
assertEquals
(
result
.
getTotalCount
(),
1
);
assertEquals
(
result
.
getTotalCount
(),
1
);
}
}
/*
@Test
(
priority
=
-
1
)
@Test
public
void
testSearchForSamplesWithProjectWithSpaceWithCode
()
public
void
testSearchForSamplesWithProjectWithSpaceWithCode
()
{
{
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
searchCriteria.withProject().withSpace().withCode().thatEquals("
CISD
");
searchCriteria
.
withProject
().
withSpace
().
withCode
().
thatEquals
(
"
SPACE1
"
);
SampleFetchOptions
fetchOptions
=
new
SampleFetchOptions
();
SampleFetchOptions
fetchOptions
=
new
SampleFetchOptions
();
fetchOptions
.
withProject
();
fetchOptions
.
withProject
();
SearchResult
<
Sample
>
result
=
v3api
.
searchSamples
(
systemSessionToken
,
searchCriteria
,
fetchOptions
);
SearchResult
<
Sample
>
result
=
v3api
.
searchSamples
(
systemSessionToken
,
searchCriteria
,
fetchOptions
);
assertEquals(result.getObjects().get(0).getIdentifier().getIdentifier(), "/CISD/NEMO/3VCP5");
assertEquals
(
result
.
getObjects
().
get
(
0
).
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1/SAMPLE3"
);
assertEquals(result.getObjects().get(0).getProject().getIdentifier().getIdentifier(), "/CISD/NEMO");
assertEquals
(
result
.
getObjects
().
get
(
0
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1"
);
assertEquals(result.getTotalCount(), 1);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1/SAMPLE4"
);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE1/PROJECT1"
);
assertEquals
(
result
.
getTotalCount
(),
2
);
}
}
@Test
@Test
(
priority
=
-
1
)
public
void
testSearchForSamplesWithProjectWithPermId
()
public
void
testSearchForSamplesWithProjectWithPermId
()
{
{
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
searchCriteria.withProject().withPermId().that
Contains("1738-103"
);
searchCriteria
.
withProject
().
withPermId
().
that
Equals
(
project2InSpace2
.
getPermId
()
);
SampleFetchOptions
fetchOptions
=
new
SampleFetchOptions
();
SampleFetchOptions
fetchOptions
=
new
SampleFetchOptions
();
fetchOptions
.
withProject
();
fetchOptions
.
withProject
();
SearchResult
<
Sample
>
result
=
v3api
.
searchSamples
(
systemSessionToken
,
searchCriteria
,
fetchOptions
);
SearchResult
<
Sample
>
result
=
v3api
.
searchSamples
(
systemSessionToken
,
searchCriteria
,
fetchOptions
);
assertEquals(result.getObjects().get(0).getIdentifier().getIdentifier(), "/CISD/NEMO/3VCP5");
assertEquals
(
result
.
getObjects
().
get
(
0
).
getIdentifier
().
getIdentifier
(),
"/SPACE2/PROJECT2/SAMPLE5"
);
assertEquals(result.getObjects().get(0).getProject().getIdentifier().getIdentifier(), "/CISD/NEMO");
assertEquals
(
result
.
getObjects
().
get
(
0
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE2/PROJECT2"
);
assertEquals(result.getTotalCount(), 1);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getIdentifier
().
getIdentifier
(),
"/SPACE2/PROJECT2/SAMPLE6"
);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getProject
().
getIdentifier
().
getIdentifier
(),
"/SPACE2/PROJECT2"
);
assertEquals
(
result
.
getTotalCount
(),
2
);
}
}
@Test
@Test
(
priority
=
-
1
)
public
void
testSearchForSamplesWithoutProjects
()
public
void
testSearchForSamplesWithoutProjects
()
{
{
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
SampleSearchCriteria
searchCriteria
=
new
SampleSearchCriteria
();
searchCriteria.withCode().thatStartsWith("3VCP");
searchCriteria
.
withCode
().
thatStartsWith
(
"SAMP"
);
searchCriteria.withExperiment();
searchCriteria
.
withoutProject
();
searchCriteria
.
withoutProject
();
SampleFetchOptions
fetchOptions
=
new
SampleFetchOptions
();
SampleFetchOptions
fetchOptions
=
new
SampleFetchOptions
();
fetchOptions
.
withProject
();
fetchOptions
.
withProject
();
SearchResult
<
Sample
>
result
=
v3api
.
searchSamples
(
systemSessionToken
,
searchCriteria
,
fetchOptions
);
SearchResult
<
Sample
>
result
=
v3api
.
searchSamples
(
systemSessionToken
,
searchCriteria
,
fetchOptions
);
assertEquals(result.getObjects().get(0).getIdentifier().getIdentifier(), "/
CISD/3VCP6
");
assertEquals
(
result
.
getObjects
().
get
(
0
).
getIdentifier
().
getIdentifier
(),
"/
SPACE1/SAMPLE1
"
);
assertEquals
(
result
.
getObjects
().
get
(
0
).
getProject
(),
null
);
assertEquals
(
result
.
getObjects
().
get
(
0
).
getProject
(),
null
);
assertEquals(result.getTotalCount(), 1);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getIdentifier
().
getIdentifier
(),
"/SPACE1/SAMPLE2"
);
assertEquals
(
result
.
getObjects
().
get
(
1
).
getProject
(),
null
);
assertEquals
(
result
.
getTotalCount
(),
2
);
}
}
*/
private
void
assertUserFailureException
(
IDelegatedAction
action
,
String
expectedExceptionMessage
)
private
void
assertUserFailureException
(
IDelegatedAction
action
,
String
expectedExceptionMessage
)
{
{
try
try
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment