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Commit 14c69957 authored by Marco Del Tufo's avatar Marco Del Tufo
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<h1>Versions of Python Compatible with MATLAB Products by Release&nbsp;</h1>
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<p>The table gives the Python versions which are compatible with the MATLAB Interface to Python, MATLAB Engine for Python, and MATLAB Compiler SDK for Python. See Note below for the Python Client Library for MATLAB Production Server.</p>
<p><b>Note: </b>As of MATLAB R2023a, Python 2.x is no longer supported.</p>
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<td>R2023a</td>
<td>3.8, 3.9, 3.10</td>
<td>3.8, 3.9, 3.10</td>
<td valign="bottom"><p>3.8, 3.9, 3.10</p></td>
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<td>R2022b</td>
<td>2.7, 3.8, 3.9, 3.10</td>
<td valign="bottom"><p>2.7, 3.8, 3.9, 3.10</p></td>
<td valign="bottom"><p>3.8, 3.9, 3.10</p></td>
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<td>R2022a</td>
<td>2.7, 3.7, 3.8, 3.9</td>
<td valign="bottom"><p>2.7, 3.8, 3.9</p></td>
<td valign="bottom"><p>2.7, 3.8, 3.9</p></td>
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<td>R2021b</td>
<td>2.7, 3.7, 3.8, 3.9</td>
<td valign="bottom"><p>2.7, 3.7, 3.8, 3.9</p></td>
<td valign="bottom"><p>2.7, 3.7, 3.8, 3.9</p></td>
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<td>R2021a</td>
<td>2.7, 3.7, 3.8</td>
<td valign="bottom"><p>2.7, 3.7, 3.8</p></td>
<td valign="bottom"><p>2.7, 3.7, 3.8</p></td>
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<td>R2020b</td>
<td>2.7, 3.6, 3.7, 3.8</td>
<td valign="bottom"><p>2.7, 3.6, 3.7, 3.8</p></td>
<td valign="bottom"><p>2.7, 3.6, 3.7, 3.8</p></td>
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<td>R2020a</td>
<td>2.7, 3.6, 3.7</td>
<td valign="bottom"><p>2.7, 3.6, 3.7</p></td>
<td valign="bottom"><p>2.7, 3.6, 3.7</p></td>
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<td>R2019b</td>
<td>2.7, 3.6, 3.7</td>
<td valign="bottom"><p>2.7, 3.6, 3.7</p></td>
<td valign="bottom"><p>2.7</p></td>
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<td>R2019a</td>
<td>2.7, 3.5, 3.6, 3.7</td>
<td valign="bottom"><p>2.7, 3.5, 3.6, 3.7</p></td>
<td valign="bottom"><p>2.7</p></td>
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<td>R2018b</td>
<td>2.7, 3.5, 3.6</td>
<td valign="bottom"><p>2.7, 3.5, 3.6</p></td>
<td valign="bottom"><p>2.7</p></td>
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<td>R2018a</td>
<td>2.7, 3.5, 3.6</td>
<td valign="bottom"><p>2.7, 3.5, 3.6</p></td>
<td valign="bottom"><p>2.7</p></td>
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<td>R2017b</td>
<td>2.7, 3.4, 3.5, 3.6</td>
<td valign="bottom"><p>2.7, 3.4, 3.5, 3.6</p></td>
<td valign="bottom"><p>2.7</p></td>
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<td>R2017a</td>
<td>2.7, 3.4, 3.5</td>
<td valign="bottom"><p>2.7, 3.4, 3.5</p></td>
<td valign="bottom"><p>2.7</p></td>
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<td>R2016b</td>
<td>2.7, 3.3, 3.4, 3.5</td>
<td valign="bottom"><p>2.7, 3.3, 3.4, 3.5</p></td>
<td valign="bottom"><p>2.7</p></td>
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<td>R2016a</td>
<td>2.7, 3.3, 3.4</td>
<td valign="bottom"><p>2.7, 3.3, 3.4</p></td>
<td valign="bottom"><p>2.7</p></td>
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<td>R2015a</td>
<td>2.7, 3.3, 3.4</td>
<td valign="bottom"><p>2.7, 3.3, 3.4</p></td>
<td valign="bottom"><p>N/A</p></td>
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<td>R2015b</td>
<td>2.7, 3.3, 3.4</td>
<td valign="bottom"><p>N/A</p></td>
<td valign="bottom"><p>N/A</p></td>
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<td>R2014b</td>
<td>2.7</td>
<td valign="bottom"><p>N/A</p></td>
<td valign="bottom"><p>N/A</p></td>
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......@@ -5,18 +5,18 @@
[MATLAB](https://ch.mathworks.com/products/matlab.html) is a high-level numerical computing environment that is popular in many areas of science. This repository provides a toolbox to access data in openBIS directly from MATLAB.
## Setup
The toolbox interacts with openBIS by calling pyBIS functions directly from MATLAB. Therefore, both Python and MATLAB have to be installed and configured properly. Please consult the [MATLAB - Python compatibility table](https://www.mathworks.com/content/dam/mathworks/mathworks-dot-com/support/sysreq/files/python-compatibility.pdf) to choose the correct versions. Also note that Python 2.7 is no longer supported!
The toolbox interacts with openBIS by calling pyBIS functions directly from MATLAB. Therefore, both Python and MATLAB have to be installed and configured properly. Please consult the [MATLAB - Python compatibility table](att/python-compatibility.pdf) to choose the correct versions. Also note that Python 2.7 is no longer supported!
#### macOS
On macOS, the setup has been tested with a Miniconda Python distribution.
1. Download and install [Miniconda3](https://conda.io/miniconda.html) (use a Python version according to the [MATLAB - Python compatibility table](https://www.mathworks.com/content/dam/mathworks/mathworks-dot-com/support/sysreq/files/python-compatibility.pdf))
1. Download and install [Miniconda3](https://conda.io/miniconda.html) (use a Python version according to the [MATLAB - Python compatibility table](att/python-compatibility.pdf))
2. Open the terminal and install pyBIS with pip: `pip install pybis`
3. Find the path to your Python executable: `which python`
4. Open MATLAB and set the Python executable. On Matlab R2019b or later, use the command: `pyenv('Version', 'Path/to/python')`. Replace with the path found in previous step. On earlier versions of Matlab, the `pyenv` command is called `pyversion`.
#### Windows 10
On Windows using the Anaconda or Miniconda approach did not work (for some reason, MATLAB could not find the Python modules). On the other hand, using the standard Python installation seems to work.
1. Download and install Python [here](https://www.python.org/downloads/windows/) (use a Python version according to the [MATLAB - Python compatibility table](https://www.mathworks.com/content/dam/mathworks/mathworks-dot-com/support/sysreq/files/python-compatibility.pdf)). Make sure to choose the **64-bit version**.
1. Download and install Python [here](https://www.python.org/downloads/windows/) (use a Python version according to the [MATLAB - Python compatibility table](att/python-compatibility.pdf)). Make sure to choose the **64-bit version**.
2. During the installation, make sure Python is added to the Path and registered as default Python interpreter. To do this, select the little tick box `Add Python 3.x to PATH` in the installation window:
![Python_install_windows](img/Python_install_windows.png)
......
docs/user-documentation/general-admin-users/admins-documentation/new-entity-type-registration.md
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......@@ -89,7 +89,7 @@ below. Three options can be chosen for the import:
An example template of an Excel masterdata file can be found here:
[masterdata-template](https://openbis.ch/wp-content/uploads/2022/02/masterdata-template.xls)
[masterdata-template](att/masterdata-template.xls)
Please note that in the template we used separate spreadsheets for each
type (Sample, Experiment, Dataset), but it is also possible to have
......@@ -117,7 +117,7 @@ new property is added to the type.
The import on the admin UI allows to register entities in addition to
masterdata. An example template file for this can be found here:
[masterdata-metadata](https://openbis.ch/wp-content/uploads/2022/02/masterdata-metadata.xls)
[masterdata-metadata](att/masterdata-metadata.xls)
......
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10.2 KiB

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Order Form
Order Information
- Date: 2022-06-21 17:19:15
- Status: NOT_YET_ORDERED
- Code: ORD1
Costumer Information
- Ship To: Lab X
- Bill To: Mr Smith
- Address: ETH Zurich
Supplier Information
- Supplier: fluka
Requested Products
Quantity Name Catalog Num Unit Price
1 methanol 12345 N/A CHF
1 ethanol 45678 30 CHF
Additional Information
N/A
\ No newline at end of file
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Order Form
Order Information
- Date: 2022-06-21 17:19:15
- Status: NOT_YET_ORDERED
- Code: ORD1
Costumer Information
- Ship To: Lab X
- Bill To: Mr Smith
- Address: ETH Zurich
Supplier Information
- Supplier: Sigma-Aldrich
Requested Products
Quantity Name Catalog Num Unit Price
2 DMSO 89765 40 CHF
Total Price:
80 CHF
Additional Information
N/A
\ No newline at end of file
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docs/user-documentation/general-users/barcodes.md
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......@@ -112,9 +112,9 @@ possible to indicate the size of the barcode, so it can fit.
We provide two example documents that can be used to test the printer.
- Split barcodes example PDF:
[printer-test-code128-split-50-15](https://openbis.ch/wp-content/uploads/2021/08/printer-test-code128-split-50-15.pdf)
[printer-test-code128-split-50-15](att/printer-test-code128-split-50-15.pdf)
- Continuous barcodes example PDF:
[printer-test-code128-continuous-50-15](https://openbis.ch/wp-content/uploads/2021/08/printer-test-code128-continuous-50-15.pdf)
[printer-test-code128-continuous-50-15](att/printer-test-code128-continuous-50-15.pdf)
Please consider that these examples likely do not correspond to the
......@@ -150,15 +150,15 @@ Open a notepad and scan the barcodes provided in the examples below. The
scanner should read them and type the correct output.
- Barcode Code 128.
[scanner-test-code128-50-15](https://openbis.ch/wp-content/uploads/2021/08/scanner-test-code128-50-15.pdf).
[scanner-test-code128-50-15](att/scanner-test-code128-50-15.pdf).
This should give as output “20210720122856003-454071” without
quotes.
- Barcode QR Code.
[scanner-test-qrcode-50-50](https://openbis.ch/wp-content/uploads/2021/08/scanner-test-qrcode-50-50.pdf).
[scanner-test-qrcode-50-50](att/scanner-test-qrcode-50-50.pdf).
This should give as output “20210720122856003-454071” without
quotes.
- Barcode Micro QR Code.
[scanner-test-microqrcode-30-30](https://openbis.ch/wp-content/uploads/2021/08/scanner-test-microqrcode-30-30.pdf).
[scanner-test-microqrcode-30-30](att/scanner-test-microqrcode-30-30.pdf).
This should give as output “20210720122856003-454071” without
quotes.
......
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