LMS-1028 add developer config

SVN: 11787

rtd_phosphonetx/etc/log.xml

+<?xml version="1.0" encoding="UTF-8" ?>
+<!DOCTYPE log4j:configuration SYSTEM "log4j.dtd">
+
+<log4j:configuration xmlns:log4j='http://jakarta.apache.org/log4j/'>
+
+  <appender name="STDOUT" class="org.apache.log4j.ConsoleAppender">
+     <layout class="org.apache.log4j.PatternLayout">
+       <param name="ConversionPattern" value="%d %-5p [%t] %c - %m%n"/>
+     </layout>
+  </appender>
+
+  <appender name="NULL" class="org.apache.log4j.varia.NullAppender" />
+
+  <root>
+     <priority value ="info" />
+     <appender-ref ref="STDOUT" />
+  </root>
+
+</log4j:configuration>

rtd_phosphonetx/etc/service.properties

+# Unique code of this Data Store Server. Not more than 40 characters.
+data-store-server-code = DSS1
+
+# The root directory of the data store
+storeroot-dir = targets/playground/data/store
+
+# Port
+port = 8889
+
+# Session timeout in minutes
+session-timeout = 720
+
+# Path to the keystore
+keystore.path = ../datastore_server/dist/etc/openBIS.keystore
+
+# Password of the keystore
+keystore.password = changeit
+
+# Key password of the keystore
+keystore.key-password = changeit
+
+# The check interval (in seconds)
+check-interval = 5
+
+# The time-out for clean up work in the shutdown sequence (in seconds).
+# Note that that the maximal time for the shutdown sequence to complete can be as large 
+# as twice this time.
+# Remark: On a network file system, it is not recommended to turn this value to something 
+# lower than 180.
+shutdown-timeout = 2
+
+# If free disk space goes below value defined here, a notification email will be sent.
+# Value must be specified in kilobytes (1048576 = 1024 * 1024 = 1GB). If no high water mark is
+# specified or if value is negative, the system will not be watching.
+highwater-mark = -1
+
+# If a data set is successfully registered it sends out an email to the registrator. 
+# If this property is not specified, no email is sent to the registrator. This property
+# does not affect the mails which are sent, when the data set could not be registered.
+notify-successful-registration = false
+
+# The URL of the openBIS server
+server-url = http://localhost:8888/openbis
+
+# The username to use when contacting the openBIS server
+username = etlserver
+
+# The password to use when contacting the openBIS server
+password = etlserver
+
+# The base URL for Web client access.
+download-url = https://localhost:8889
+
+# SMTP properties (must start with 'mail' to be considered). 
+# mail.smtp.host = localhost
+# mail.from = datastore_server@localhost
+
+# ---------------- Timing parameters for file system operations on remote shares.
+
+# Time (in seconds) to wait for any file system operation to finish. Operations exceeding this 
+# timeout will be terminated. 
+timeout = 60
+# Number of times that a timed out operation will be tried again (0 means: every file system 
+# operation will only ever be performed once).
+max-retries = 11
+# Time (in seconds) to wait after an operation has been timed out before re-trying.  
+failure-interval = 10 
+
+# The period of no write access that needs to pass before an incoming data item is considered 
+# complete and ready to be processed (in seconds) [default: 300]. 
+# Valid only when auto-detection method is used to determine if an incoming data are ready to be processed.
+quiet-period = 10
+
+# Globally used separator character which separates entities in a data set file name 
+data-set-file-name-entity-separator = _
+
+# Specifies what should happen if an error occurs during dataset processing. 
+# By default this flag is set to false and user has to modify the 'faulty paths file' 
+# each time the faulty dataset should be processed again.
+# Set this flag to true if the processing should be repeated after some time without manual intervention.
+# Note that this can increase the server load.
+# reprocess-faulty-datasets = false
+
+# Comma separated names of processing threads. Each thread should have configuration properties prefixed with its name.
+# E.g. 'code-extractor' property for the thread 'my-etl' should be specified as 'my-etl.code-extractor'
+inputs=main-thread
+
+# ---------------------------------------------------------------------------
+# 'main-thread' thread configuration
+# ---------------------------------------------------------------------------
+# The directory to watch for incoming data.
+main-thread.incoming-dir = targets/playground/data/incoming
+
+# Determines when the incoming data should be considered complete and ready to be processed.
+# Allowed values: 
+#  - auto-detection - when no write access will be detected for a specified 'quite-period'
+#  - marker-file		- when an appropriate marker file for the data exists. 
+# The default value is 'marker-file'.
+main-thread.incoming-data-completeness-condition = auto-detection
+
+# The group the samples extracted by this thread belong to. If commented out or empty, then samples
+# are considered associated to a database instance (not group private). 
+# main-thread.group-code = <change this>
+
+# ---------------- Plugin properties
+# The extractor class to use for code extraction
+main-thread.data-set-info-extractor = ch.systemsx.cisd.etlserver.DefaultDataSetInfoExtractor
+main-thread.data-set-info-extractor.strip-file-extension = true
+main-thread.data-set-info-extractor.entity-separator = ${data-set-file-name-entity-separator}
+main-thread.data-set-info-extractor.group-code = TEST
+# Location of file containing data set properties 
+#main-thread.data-set-info-extractor.data-set-properties-file-name = data-set.properties
+
+# The extractor class to use for type extraction
+main-thread.type-extractor = ch.systemsx.cisd.etlserver.SimpleTypeExtractor
+main-thread.type-extractor.file-format-type = XML
+main-thread.type-extractor.locator-type = RELATIVE_LOCATION
+main-thread.type-extractor.data-set-type = PROT_RESULT
+main-thread.type-extractor.is-measured = true
+
+main-thread.dataset-handler = ch.systemsx.cisd.openbis.etlserver.phosphonetx.ResultDataSetHandler
+main-thread.dataset-handler.database.kind = dev
+main-thread.dataset-handler.database.owner = 
+main-thread.dataset-handler.database.password = 
+
+# The storage processor (IStorageProcessor implementation)
+main-thread.storage-processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor