LMS-835 new database schema 032

SVN: 10602

openbis/source/sql/generic/032/data-032.sql

+----------------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table DATABASE_INSTANCES
+----------------------------------------------------------------------------
+
+INSERT INTO database_instances(
+              id
+            , code
+	    	, uuid
+            , is_original_source)
+    VALUES (  nextval('DATABASE_INSTANCE_ID_SEQ')
+            , 'SYSTEM_DEFAULT'
+	    	, 'SYSTEM_DEFAULT'
+            , 'T');
+
+----------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table DATA_STORES
+----------------------------------------------------------------------
+
+insert into data_stores
+(id
+,code
+,download_url
+,dbin_id)
+values
+(nextval('DATA_STORE_ID_SEQ')
+,'STANDARD'
+,''
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+update database_instances set dast_id = (select id from data_stores where code = 'STANDARD');
+
+----------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table PERSONS
+-----------------------------------------------------------------------
+
+insert into persons
+(id
+,first_name
+,last_name
+,user_id
+,email
+,dbin_id)
+values
+(nextval('PERSON_ID_SEQ')
+,''
+,'System User'
+,'system'
+,''
+,(select id from database_instances where code = 'SYSTEM_DEFAULT') );
+
+-----------------------------------------------------------------------------------
+--  Purpose:  Create Controlled Vocabulary PLATE_GEOMETRY
+-----------------------------------------------------------------------------------
+insert into controlled_vocabularies
+       ( id
+       , code
+       , is_internal_namespace
+       , description
+       , pers_id_registerer
+       , is_managed_internally
+       , dbin_id )
+values  (nextval('CONTROLLED_VOCABULARY_ID_SEQ')
+       , 'PLATE_GEOMETRY'
+       , true
+       , 'The geometry or dimensions of a plate'
+       , (select id from persons where user_id ='system')
+       , true
+       ,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+
+-----------------------------------------------------------------------------------
+--  Purpose:  Create Controlled Vocabulary Terms for PLATE_GEOMETRY
+-----------------------------------------------------------------------------------
+insert into controlled_vocabulary_terms 
+       ( id
+       , code
+       , covo_id 
+       , pers_id_registerer)
+values  (nextval('CVTE_ID_SEQ')
+       , '96_WELLS_8X12'
+       , (select id from controlled_vocabularies where code = 'PLATE_GEOMETRY' and is_internal_namespace = true)
+       , (select id from persons where user_id ='system'));
+
+insert into controlled_vocabulary_terms 
+       ( id
+       , code
+       , covo_id 
+       , pers_id_registerer)
+values  (nextval('CVTE_ID_SEQ')
+       , '384_WELLS_16X24'
+       , (select id from controlled_vocabularies where code = 'PLATE_GEOMETRY' and is_internal_namespace = true)
+       , (select id from persons where user_id ='system'));
+
+insert into controlled_vocabulary_terms 
+       ( id
+       , code
+       , covo_id 
+       , pers_id_registerer)
+values  (nextval('CVTE_ID_SEQ')
+       , '1536_WELLS_32X48'
+       , (select id from controlled_vocabularies where code = 'PLATE_GEOMETRY' and is_internal_namespace = true)
+       , (select id from persons where user_id ='system'));
+
+-----------------------------------------------------------------------------------
+--  Purpose:  Create Controlled Vocabulary STORAGE_FORMAT
+-----------------------------------------------------------------------------------
+insert into controlled_vocabularies 
+       ( id
+       , code
+       , is_internal_namespace      
+       , description
+       , pers_id_registerer
+       , is_managed_internally
+       , dbin_id )
+values  (nextval('CONTROLLED_VOCABULARY_ID_SEQ')
+       , 'STORAGE_FORMAT'
+       , true
+       , 'The on-disk storage format of a data set'
+       , (select id from persons where user_id ='system')
+       , true
+       ,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+
+-----------------------------------------------------------------------------------
+--  Purpose:  Create Controlled Vocabulary Terms for STORAGE_FORMAT
+-----------------------------------------------------------------------------------
+insert into controlled_vocabulary_terms 
+       ( id
+       , code
+       , covo_id 
+       , pers_id_registerer )
+values  (nextval('CVTE_ID_SEQ')
+       , 'PROPRIETARY'
+       , (select id from controlled_vocabularies where code = 'STORAGE_FORMAT' and is_internal_namespace = true)
+       , (select id from persons where user_id ='system'));
+
+insert into controlled_vocabulary_terms 
+       ( id
+       , code
+       , covo_id 
+       , pers_id_registerer )
+values  (nextval('CVTE_ID_SEQ')
+       , 'BDS_DIRECTORY'
+       , (select id from controlled_vocabularies where code = 'STORAGE_FORMAT' and is_internal_namespace = true)
+       , (select id from persons where user_id ='system'));
+
+
+-------------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table EXPERIMENT_TYPES
+--------------------------------------------------------------------------
+
+insert into experiment_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('EXPERIMENT_TYPE_ID_SEQ')
+,'SIRNA_HCS'
+,'Small Interfering RNA High Content Screening'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+insert into experiment_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('EXPERIMENT_TYPE_ID_SEQ')
+,'COMPOUND_HCS'
+,'Compound High Content Screening'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+
+----------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table MATERIAL_TYPES
+-----------------------------------------------------------------------
+
+insert into material_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('MATERIAL_TYPE_ID_SEQ')
+,'VIRUS'
+,'Virus'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+insert into material_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('MATERIAL_TYPE_ID_SEQ')
+,'CELL_LINE'
+,'Cell Line or Cell Culture. The growing of cells under controlled conditions.'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+insert into material_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('MATERIAL_TYPE_ID_SEQ')
+,'GENE'
+,'Gene'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+insert into material_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('MATERIAL_TYPE_ID_SEQ')
+,'OLIGO'
+,'Oligo nucleotide'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+insert into material_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('MATERIAL_TYPE_ID_SEQ')
+,'CONTROL'
+,'Control of a control layout'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+insert into material_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('MATERIAL_TYPE_ID_SEQ')
+,'BACTERIUM'
+,'Bacterium'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+insert into material_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('MATERIAL_TYPE_ID_SEQ')
+,'COMPOUND'
+,'Compound'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT'));
+
+
+------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table DATA_TYPES
+------------------------------------------------------------------
+
+insert into data_types
+(id
+,code
+,description)
+values 
+(nextval('DATA_TYPE_ID_SEQ')
+,'VARCHAR'
+,'Short text'
+);
+
+insert into data_types
+(id
+ ,code
+ ,description)
+ values 
+ (nextval('DATA_TYPE_ID_SEQ')
+ ,'MULTILINE_VARCHAR'
+ ,'Long text'
+);
+
+insert into data_types
+(id
+,code
+,description)
+values 
+(nextval('DATA_TYPE_ID_SEQ')
+,'INTEGER'
+,'Integer number'
+);
+
+insert into data_types
+(id
+,code
+,description)
+values 
+(nextval('DATA_TYPE_ID_SEQ')
+,'REAL'
+,'Real number, i.e. an inexact, variable-precision numeric type'
+);
+
+insert into data_types
+(id
+,code
+,description)
+values 
+(nextval('DATA_TYPE_ID_SEQ')
+,'BOOLEAN'
+,'True or False'
+);
+
+insert into data_types
+(id
+,code
+,description)
+values 
+(nextval('DATA_TYPE_ID_SEQ')
+,'TIMESTAMP'
+,'Both date and time. Format: yyyy-mm-dd hh:mm:ss'
+);
+
+insert into data_types
+(id
+ ,code
+ ,description)
+ values 
+ (nextval('DATA_TYPE_ID_SEQ')
+ ,'CONTROLLEDVOCABULARY'
+ ,'Controlled Vocabulary'
+);
+
+insert into data_types
+(id
+ ,code
+ ,description)
+ values 
+ (nextval('DATA_TYPE_ID_SEQ')
+ ,'MATERIAL'
+ ,'Reference to a material'
+);
+
+insert into data_types
+(id
+ ,code
+ ,description)
+ values 
+ (nextval('DATA_TYPE_ID_SEQ')
+ ,'HYPERLINK'
+ ,'Address of a web page'
+);
+
+----------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table PROPERTY_TYPES
+-----------------------------------------------------------------------
+
+insert into property_types
+(id
+,code
+,description
+,label
+,daty_id
+,pers_id_registerer
+,dbin_id)
+values 
+(nextval('PROPERTY_TYPE_ID_SEQ')
+,'DESCRIPTION'
+,'A Description'
+,'Description'
+,(select id from data_types where code ='VARCHAR')
+,(select id from persons where user_id ='system')
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into property_types
+(id
+,code
+,description
+,label
+,daty_id
+,pers_id_registerer
+,dbin_id)
+values 
+(nextval('PROPERTY_TYPE_ID_SEQ')
+,'GENE_SYMBOL'
+,'Gene Symbol, e.g. BMP15'
+,'Gene Symbol'
+,(select id from data_types where code ='VARCHAR')
+,(select id from persons where user_id ='system')
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into property_types
+(id
+,code
+,description
+,label
+,daty_id
+,pers_id_registerer
+,dbin_id)
+values 
+(nextval('PROPERTY_TYPE_ID_SEQ')
+,'NUCLEOTIDE_SEQUENCE'
+,'A sequence of nucleotides'
+,'Nucleotide Sequence'
+,(select id from data_types where code ='VARCHAR')
+,(select id from persons where user_id ='system')
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into property_types
+(id
+,code
+,description
+,label
+,daty_id
+,pers_id_registerer
+,dbin_id)
+values 
+(nextval('PROPERTY_TYPE_ID_SEQ')
+,'REFSEQ'
+,'NCBI Reference Sequence code, applicable to sequences of type: DNA, RNA, protein'
+,'RefSeq'
+,(select id from data_types where code ='VARCHAR')
+,(select id from persons where user_id ='system')
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into property_types
+(id
+,code
+,description
+,label
+,daty_id
+,pers_id_registerer
+,dbin_id)
+values 
+(nextval('PROPERTY_TYPE_ID_SEQ')
+,'OFFSET'
+,'Offset from the start of the sequence'
+,'Offset'
+,(select id from data_types where code ='INTEGER')
+,(select id from persons where user_id ='system')
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+-----------------------------------------------------------------------------------
+--  Purpose:  Create property type PLATE_GEOMETRY
+-----------------------------------------------------------------------------------
+insert into property_types
+(id
+,code
+,is_internal_namespace
+,description
+,label
+,daty_id
+,covo_id
+,pers_id_registerer
+, is_managed_internally 
+,dbin_id)
+values 
+(nextval('PROPERTY_TYPE_ID_SEQ')
+,'PLATE_GEOMETRY'
+,true
+,'Plate Geometry'
+,'Plate Geometry'
+,(select id from data_types where code ='CONTROLLEDVOCABULARY')
+,(select id from controlled_vocabularies where code ='PLATE_GEOMETRY' and is_internal_namespace = true)
+,(select id from persons where user_id ='system')
+,true
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+
+----------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table SAMPLE_TYPES
+----------------------------------------------------------------------
+
+insert into sample_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('SAMPLE_TYPE_ID_SEQ')
+,'MASTER_PLATE'
+,'Master Plate'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into sample_types
+(id
+,code
+,description
+,dbin_id
+,generated_from_depth)
+values 
+(nextval('SAMPLE_TYPE_ID_SEQ')
+,'DILUTION_PLATE'
+,'Dilution Plate'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+,1
+);
+
+insert into sample_types
+(id
+,code
+,description
+,dbin_id
+,generated_from_depth)
+values 
+(nextval('SAMPLE_TYPE_ID_SEQ')
+,'CELL_PLATE'
+,'Cell Plate'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+,2
+);
+
+insert into sample_types
+(id
+,code
+,description
+,dbin_id
+,generated_from_depth)
+values 
+(nextval('SAMPLE_TYPE_ID_SEQ')
+,'REINFECT_PLATE'
+,'Re-infection Plate'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+,3
+);
+
+insert into sample_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('SAMPLE_TYPE_ID_SEQ')
+,'CONTROL_LAYOUT'
+,'Control layout'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into sample_types
+(id
+,code
+,description
+,dbin_id
+,is_listable
+,generated_from_depth
+,part_of_depth)
+values 
+(nextval('SAMPLE_TYPE_ID_SEQ')
+,'WELL'
+,'Plate Well'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+,'F'
+,0
+,1
+);
+
+
+------------------------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table EXPERIMENT_TYPE_PROPERTY_TYPES
+------------------------------------------------------------------------------------
+
+----
+-- Note: we rely on DESCRIPTION to be present and internally_managed for all experiment types!
+----
+
+   ----------------------------------
+   --  Experiment Type SIRNA_HCS
+   ----------------------------------
+
+insert into experiment_type_property_types
+(   id
+   ,exty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('ETPT_ID_SEQ')
+   ,(select id from experiment_types where code = 'SIRNA_HCS')
+   ,(select id from property_types where code = 'DESCRIPTION' and is_internal_namespace = false)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+   ----------------------------------
+   --  Experiment Type COMPOUND_HCS
+   ----------------------------------
+
+insert into experiment_type_property_types
+(   id
+   ,exty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('ETPT_ID_SEQ')
+   ,(select id from experiment_types where code = 'COMPOUND_HCS')
+   ,(select id from property_types where code = 'DESCRIPTION' and is_internal_namespace = false)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+
+------------------------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table SAMPLE_TYPE_PROPERTY_TYPES
+------------------------------------------------------------------------------------
+
+   ---------------------------------
+   --  Sample Type   MASTER_PLATE
+   --  Property Type PLATE_GEOMETRY   
+   ---------------------------------
+
+insert into sample_type_property_types
+(   id
+   ,saty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('STPT_ID_SEQ')
+   ,(select id from sample_types where code = 'MASTER_PLATE')
+   ,(select id from property_types where code = 'PLATE_GEOMETRY' and is_internal_namespace = true)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+   ---------------------------------
+   --  Sample Type   CONTROL_LAYOUT
+   --  Property Type PLATE_GEOMETRY   
+   ---------------------------------
+
+insert into sample_type_property_types
+(   id
+   ,saty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('STPT_ID_SEQ')
+   ,(select id from sample_types where code = 'CONTROL_LAYOUT')
+   ,(select id from property_types where code = 'PLATE_GEOMETRY' and is_internal_namespace = true)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+
+------------------------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table MATERIAL_TYPE_PROPERTY_TYPES
+------------------------------------------------------------------------------------
+
+----
+-- Note: we rely on DESCRIPTION to be present and internally_managed for all material types!
+----
+
+   -----------------------
+   --  Material Type VIRUS
+   -----------------------
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'VIRUS')
+   ,(select id from property_types where code = 'DESCRIPTION' and is_internal_namespace = false)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+   -----------------------
+   --  Material Type BACTERIUM
+   -----------------------
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'BACTERIUM')
+   ,(select id from property_types where code = 'DESCRIPTION' and is_internal_namespace = false)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+   -----------------------
+   --  Material Type COMPOUND
+   -----------------------
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'COMPOUND')
+   ,(select id from property_types where code = 'DESCRIPTION' and is_internal_namespace = false)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+   -----------------------
+   --  Material Type GENE
+   -----------------------
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'GENE')
+   ,(select id from property_types where code = 'GENE_SYMBOL' and is_internal_namespace = false)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'GENE')
+   ,(select id from property_types where code = 'DESCRIPTION' and is_internal_namespace = false)
+   ,false
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+
+   -----------------------
+   --  Material Type OLIGO
+   -----------------------
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'OLIGO')
+   ,(select id from property_types where code = 'NUCLEOTIDE_SEQUENCE' and is_internal_namespace = false)
+   ,true
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'OLIGO')
+   ,(select id from property_types where code = 'OFFSET' and is_internal_namespace = false)
+   ,false
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'OLIGO')
+   ,(select id from property_types where code = 'DESCRIPTION' and is_internal_namespace = false)
+   ,false
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+   -------------------------
+   --  Material Type CONTROL
+   -------------------------
+
+insert into material_type_property_types
+(   id
+   ,maty_id
+   ,prty_id
+   ,is_mandatory
+   ,is_managed_internally
+   ,pers_id_registerer
+   )
+values 
+   (nextval('MTPT_ID_SEQ')
+   ,(select id from material_types where code = 'CONTROL')
+   ,(select id from property_types where code = 'DESCRIPTION' and is_internal_namespace = false)
+   ,false
+   ,true
+   ,(select id from persons where user_id ='system')
+);
+
+--------------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table DATA_SET_TYPES
+--------------------------------------------------------------------------
+
+insert into data_set_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('DATA_SET_TYPE_ID_SEQ')
+,'UNKNOWN'
+,'Unknown'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into data_set_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('DATA_SET_TYPE_ID_SEQ')
+,'HCS_IMAGE'
+,'High Content Screening Image'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into data_set_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('DATA_SET_TYPE_ID_SEQ')
+,'HCS_IMAGE_ANALYSIS_DATA'
+,'Data derived from analysis of HCS images'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+-------------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table FILE_FORMAT_TYPES
+-------------------------------------------------------------------------
+
+insert into file_format_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('FILE_FORMAT_TYPE_ID_SEQ')
+,'TIFF'
+,'TIFF File'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into file_format_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('FILE_FORMAT_TYPE_ID_SEQ')
+,'3VPROPRIETARY'
+,'Data Analysis 3V proprietary format'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+insert into file_format_types
+(id
+,code
+,description
+,dbin_id)
+values 
+(nextval('FILE_FORMAT_TYPE_ID_SEQ')
+,'PLKPROPRIETARY'
+,'Data Analysis Pelkmans group proprietary format'
+,(select id from database_instances where code = 'SYSTEM_DEFAULT')
+);
+
+---------------------------------------------------------------------
+--  Purpose:  Insert an initial data set into the table LOCATOR_TYPES
+---------------------------------------------------------------------
+
+insert into locator_types
+(id
+,code
+,description)
+values 
+(nextval('LOCATOR_TYPE_ID_SEQ')
+,'RELATIVE_LOCATION'
+,'Relative Location'
+);

openbis/source/sql/generic/032/schema-032.sql

+-- D:\DDL\postgresql\schema-023.sql
+--
+-- Generated for ANSI SQL92 on Fri Jul 04  15:13:22 2008 by Server Generator 10.1.2.6.18
+------------------------------------------------------------------------------------
+--
+--  Post-Generation Modifications:
+--
+--  1. Changed domain FILE from BIT(32000) to BYTEA
+--  2. Changed domain TECH_ID from NUMERIC(20) to BIGINT
+--  3. Changed domain BOOLEAN_CHAR from CHAR(1) DEFAULT F to BOOLEAN DEFAULT FALSE
+--  4. Removed the check constraints to handle boolean values in Oracle for the
+--     tables MATERIAL_TYPE_PROPERTY_TYPES, EXPERIMENT_TYPE_PROPERTY_TYPES and
+--     SAMPLE_TYPE_PROPERTY_TYPES (AVCON_%)
+--  5. Added the ON DELETE CASCADE qualifier to the foreign keys MAPR_MTPT_FK,
+--     EXPR_ETPT_FK and SAPR_STPT_FK
+--  6. Add the check constraint directly on the domain BOOLEAN_CHAR_OR_UNKNOWN
+--     CREATE DOMAIN BOOLEAN_CHAR_OR_UNKNOWN AS CHAR(1) CHECK (VALUE in ('F', 'T', 'U')) DEFAULT 'U';
+--  7. Add the WITH TIMEZONE qualifier to the domain TIME_STAMP
+--     CREATE DOMAIN TIME_STAMP AS TIMESTAMP WITH TIME ZONE;
+--  8. Add the WITH TIMEZONE and NOT NULL qualifiers to the domain TIME_STAMP_DFL
+--     CREATE DOMAIN TIME_STAMP_DFL AS TIMESTAMP WITH TIME ZONE NOT NULL DEFAULT CURRENT_TIMESTAMP;
+--  9. Extend the domain EVENT_TYPE by adding the CHECK constraint
+--     CREATE DOMAIN EVENT_TYPE AS VARCHAR(40) CHECK (VALUE in ('DELETION', 'INVALIDATION', 'MOVEMENT'));
+--  10. Extend the domain AUTHORIZATION_ROLE by adding the CHECK constraint
+--     CREATE DOMAIN AUTHORIZATION_ROLE as VARCHAR(40) CHECK (VALUE IN ('ADMIN', 'USER', 'OBSERVER', 'ETL_SERVER'));
+--  11. Added the Sequence and Index sections
+--  12. Added DATABASE_INSTANCES.GLOBAL_CODE column for UUID
+--  13. DATABASE_INSTANCES.GLOBAL_CODE renamed to DATABASE_INSTANCES.UUID
+--  14. OBSERVABLE_TYPES renamed to DATA_SET_TYPES
+--  15. OBSERVABLE_TYPE_ID_SEQ renamed to DATA_SET_TYPE_ID_SEQ
+--  16. DATA.OBTY_ID renamed to DATA.DSTY_ID;
+--  17. some others - the source model should be updated to make these Post-Generation Modifications minimal 
+------------------------------------------------------------------------------------
+
+-- Creating domains
+
+CREATE DOMAIN AUTHORIZATION_ROLE AS VARCHAR(40) CHECK (VALUE IN ('ADMIN', 'USER', 'OBSERVER', 'ETL_SERVER'));
+CREATE DOMAIN BOOLEAN_CHAR AS BOOLEAN DEFAULT FALSE;
+CREATE DOMAIN BOOLEAN_CHAR_OR_UNKNOWN AS CHAR(1) CHECK (VALUE IN ('F', 'T', 'U')) DEFAULT 'U';
+CREATE DOMAIN CODE AS VARCHAR(40);
+CREATE DOMAIN COLUMN_LABEL AS VARCHAR(40);
+CREATE DOMAIN DESCRIPTION_1000 AS VARCHAR(1000);
+CREATE DOMAIN DESCRIPTION_250 AS VARCHAR(250);
+CREATE DOMAIN DESCRIPTION_80 AS VARCHAR(80);
+CREATE DOMAIN EVENT_TYPE AS VARCHAR(40) CHECK (VALUE IN ('DELETION', 'INVALIDATION', 'MOVEMENT'));
+CREATE DOMAIN FILE AS BYTEA;
+CREATE DOMAIN FILE_NAME AS VARCHAR(100);
+CREATE DOMAIN GENERIC_VALUE AS VARCHAR(1024);
+CREATE DOMAIN OBJECT_NAME AS VARCHAR(50);
+CREATE DOMAIN REAL_VALUE AS REAL;
+CREATE DOMAIN TECH_ID AS BIGINT;
+CREATE DOMAIN TIME_STAMP AS TIMESTAMP WITH TIME ZONE;
+CREATE DOMAIN TIME_STAMP_DFL AS TIMESTAMP WITH TIME ZONE NOT NULL DEFAULT CURRENT_TIMESTAMP;
+CREATE DOMAIN USER_ID AS VARCHAR(50);
+-- Creating tables
+
+CREATE TABLE CONTROLLED_VOCABULARIES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL,IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_INTERNAL_NAMESPACE BOOLEAN_CHAR NOT NULL DEFAULT 'F',DBIN_ID TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE CONTROLLED_VOCABULARY_TERMS (ID TECH_ID NOT NULL,CODE OBJECT_NAME NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,COVO_ID TECH_ID NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL);
+CREATE TABLE DATA (ID TECH_ID NOT NULL,CODE CODE,DSTY_ID TECH_ID NOT NULL,EXPE_ID TECH_ID NOT NULL,DATA_PRODUCER_CODE CODE,PRODUCTION_TIMESTAMP TIME_STAMP,SAMP_ID_ACQUIRED_FROM TECH_ID,SAMP_ID_DERIVED_FROM TECH_ID,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,IS_PLACEHOLDER BOOLEAN_CHAR DEFAULT 'F',IS_DELETED BOOLEAN_CHAR DEFAULT 'F',IS_VALID BOOLEAN_CHAR DEFAULT 'T', MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE DATABASE_INSTANCES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,UUID CODE NOT NULL,IS_ORIGINAL_SOURCE BOOLEAN_CHAR NOT NULL DEFAULT 'F',REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,DAST_ID TECH_ID);
+CREATE TABLE DATA_SET_RELATIONSHIPS (DATA_ID_PARENT TECH_ID NOT NULL,DATA_ID_CHILD TECH_ID NOT NULL);
+CREATE TABLE DATA_STORES (ID TECH_ID NOT NULL,DBIN_ID TECH_ID NOT NULL,CODE CODE NOT NULL,DOWNLOAD_URL VARCHAR(1024) NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE DATA_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80 NOT NULL);
+CREATE TABLE EVENTS (ID TECH_ID NOT NULL,EVENT_TYPE EVENT_TYPE NOT NULL,DESCRIPTION DESCRIPTION_250,DATA_ID TECH_ID,REASON DESCRIPTION_250,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE EXPERIMENTS (ID TECH_ID NOT NULL,CODE CODE NOT NULL,EXTY_ID TECH_ID NOT NULL,MATE_ID_STUDY_OBJECT TECH_ID,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, PROJ_ID TECH_ID NOT NULL,INVA_ID TECH_ID,IS_PUBLIC BOOLEAN_CHAR NOT NULL DEFAULT 'F',DAST_ID TECH_ID);
+CREATE TABLE ATTACHMENTS (ID TECH_ID NOT NULL,EXPE_ID TECH_ID,SAMP_ID TECH_ID,PROJ_ID TECH_ID,EXAC_ID TECH_ID NOT NULL,FILE_NAME FILE_NAME NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,VERSION INTEGER NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL);
+CREATE TABLE ATTACHMENT_CONTENTS (ID TECH_ID NOT NULL,VALUE FILE NOT NULL);
+CREATE TABLE EXPERIMENT_PROPERTIES (ID TECH_ID NOT NULL,EXPE_ID TECH_ID NOT NULL,ETPT_ID TECH_ID NOT NULL,VALUE GENERIC_VALUE,CVTE_ID TECH_ID, MATE_PROP_ID TECH_ID, PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE EXPERIMENT_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80,DBIN_ID TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE EXPERIMENT_TYPE_PROPERTY_TYPES (ID TECH_ID NOT NULL,EXTY_ID TECH_ID NOT NULL,PRTY_ID TECH_ID NOT NULL,IS_MANDATORY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE EXTERNAL_DATA (DATA_ID TECH_ID NOT NULL,LOCATION VARCHAR(1024) NOT NULL,FFTY_ID TECH_ID NOT NULL,LOTY_ID TECH_ID NOT NULL,CVTE_ID_STOR_FMT TECH_ID NOT NULL,IS_COMPLETE BOOLEAN_CHAR_OR_UNKNOWN NOT NULL DEFAULT 'U',CVTE_ID_STORE TECH_ID);
+CREATE TABLE FILE_FORMAT_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80,DBIN_ID TECH_ID NOT NULL);
+CREATE TABLE GROUPS (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DBIN_ID TECH_ID NOT NULL,GROU_ID_PARENT TECH_ID,PERS_ID_LEADER TECH_ID,DESCRIPTION DESCRIPTION_250,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL,DAST_ID TECH_ID);
+CREATE TABLE INVALIDATIONS (ID TECH_ID NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,REASON DESCRIPTION_250);
+CREATE TABLE LOCATOR_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80);
+CREATE TABLE MATERIALS (ID TECH_ID NOT NULL,CODE CODE NOT NULL,MATY_ID TECH_ID NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL,MATE_ID_INHIBITOR_OF TECH_ID,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, DBIN_ID TECH_ID NOT NULL);
+CREATE TABLE MATERIAL_BATCHES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,AMOUNT REAL_VALUE,MATE_ID TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL);
+CREATE TABLE MATERIAL_PROPERTIES (ID TECH_ID NOT NULL,MATE_ID TECH_ID NOT NULL,MTPT_ID TECH_ID NOT NULL,VALUE GENERIC_VALUE,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, PERS_ID_REGISTERER TECH_ID NOT NULL,CVTE_ID TECH_ID, MATE_PROP_ID TECH_ID);
+CREATE TABLE MATERIAL_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80,DBIN_ID TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE MATERIAL_TYPE_PROPERTY_TYPES (ID TECH_ID NOT NULL,MATY_ID TECH_ID NOT NULL,PRTY_ID TECH_ID NOT NULL,IS_MANDATORY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL);
+CREATE TABLE DATA_SET_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80,DBIN_ID TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE PERSONS (ID TECH_ID NOT NULL,FIRST_NAME VARCHAR(30),LAST_NAME VARCHAR(30),USER_ID USER_ID NOT NULL,EMAIL OBJECT_NAME,DBIN_ID TECH_ID NOT NULL,GROU_ID TECH_ID,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID);
+CREATE TABLE PROJECTS (ID TECH_ID NOT NULL,CODE CODE NOT NULL,GROU_ID TECH_ID NOT NULL,PERS_ID_LEADER TECH_ID,DESCRIPTION DESCRIPTION_1000,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP,DAST_ID TECH_ID);
+CREATE TABLE PROPERTY_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80 NOT NULL,LABEL COLUMN_LABEL NOT NULL,DATY_ID TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL,COVO_ID TECH_ID,IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_INTERNAL_NAMESPACE BOOLEAN_CHAR NOT NULL DEFAULT 'F',DBIN_ID TECH_ID NOT NULL, MATY_PROP_ID TECH_ID);
+CREATE TABLE ROLE_ASSIGNMENTS (ID TECH_ID NOT NULL,ROLE_CODE AUTHORIZATION_ROLE NOT NULL,GROU_ID TECH_ID,DBIN_ID TECH_ID,PERS_ID_GRANTEE TECH_ID NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE SAMPLES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,EXPE_ID TECH_ID,SAMP_ID_TOP TECH_ID,SAMP_ID_GENERATED_FROM TECH_ID,SATY_ID TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL,INVA_ID TECH_ID,SAMP_ID_CONTROL_LAYOUT TECH_ID,DBIN_ID TECH_ID,GROU_ID TECH_ID,SAMP_ID_PART_OF TECH_ID);
+CREATE TABLE SAMPLE_MATERIAL_BATCHES (SAMP_ID TECH_ID NOT NULL,MABA_ID TECH_ID NOT NULL);
+CREATE TABLE SAMPLE_PROPERTIES (ID TECH_ID NOT NULL,SAMP_ID TECH_ID NOT NULL,STPT_ID TECH_ID NOT NULL,VALUE GENERIC_VALUE,CVTE_ID TECH_ID,MATE_PROP_ID TECH_ID,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE SAMPLE_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_80,DBIN_ID TECH_ID NOT NULL, IS_LISTABLE BOOLEAN_CHAR NOT NULL DEFAULT 'T', GENERATED_FROM_DEPTH INTEGER NOT NULL DEFAULT 0, PART_OF_DEPTH INTEGER NOT NULL DEFAULT 0, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE SAMPLE_TYPE_PROPERTY_TYPES (ID TECH_ID NOT NULL,SATY_ID TECH_ID NOT NULL,PRTY_ID TECH_ID NOT NULL,IS_MANDATORY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, IS_DISPLAYED BOOLEAN_CHAR NOT NULL DEFAULT 'T');
+
+CREATE TABLE DATA_SET_PROPERTIES (ID TECH_ID NOT NULL,DS_ID TECH_ID NOT NULL,DSTPT_ID TECH_ID NOT NULL,VALUE GENERIC_VALUE,CVTE_ID TECH_ID, MATE_PROP_ID TECH_ID, PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP);
+CREATE TABLE DATA_SET_TYPE_PROPERTY_TYPES (ID TECH_ID NOT NULL,DSTY_ID TECH_ID NOT NULL,PRTY_ID TECH_ID NOT NULL,IS_MANDATORY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP);
+
+-- Creating sequences
+
+CREATE SEQUENCE CONTROLLED_VOCABULARY_ID_SEQ;
+CREATE SEQUENCE CVTE_ID_SEQ;
+CREATE SEQUENCE DATABASE_INSTANCE_ID_SEQ;
+CREATE SEQUENCE DATA_ID_SEQ;
+CREATE SEQUENCE DATA_SET_RELATIONSHIP_ID_SEQ;
+CREATE SEQUENCE DATA_STORE_ID_SEQ;
+CREATE SEQUENCE DATA_TYPE_ID_SEQ;
+CREATE SEQUENCE ETPT_ID_SEQ;
+CREATE SEQUENCE EVENT_ID_SEQ;
+CREATE SEQUENCE ATTACHMENT_ID_SEQ;
+CREATE SEQUENCE ATTACHMENT_CONTENT_ID_SEQ;
+CREATE SEQUENCE EXPERIMENT_ID_SEQ;
+CREATE SEQUENCE EXPERIMENT_PROPERTY_ID_SEQ;
+CREATE SEQUENCE EXPERIMENT_TYPE_ID_SEQ;
+CREATE SEQUENCE FILE_FORMAT_TYPE_ID_SEQ;
+CREATE SEQUENCE GROUP_ID_SEQ;
+CREATE SEQUENCE INVALIDATION_ID_SEQ;
+CREATE SEQUENCE LOCATOR_TYPE_ID_SEQ;
+CREATE SEQUENCE MATERIAL_BATCH_ID_SEQ;
+CREATE SEQUENCE MATERIAL_ID_SEQ;
+CREATE SEQUENCE MATERIAL_PROPERTY_ID_SEQ;
+CREATE SEQUENCE MATERIAL_TYPE_ID_SEQ;
+CREATE SEQUENCE MTPT_ID_SEQ;
+CREATE SEQUENCE DATA_SET_TYPE_ID_SEQ;
+CREATE SEQUENCE PERSON_ID_SEQ;
+CREATE SEQUENCE PROJECT_ID_SEQ;
+CREATE SEQUENCE PROPERTY_TYPE_ID_SEQ;
+CREATE SEQUENCE ROLE_ASSIGNMENT_ID_SEQ;
+CREATE SEQUENCE SAMPLE_ID_SEQ;
+CREATE SEQUENCE SAMPLE_PROPERTY_ID_SEQ;
+CREATE SEQUENCE SAMPLE_TYPE_ID_SEQ;
+CREATE SEQUENCE STPT_ID_SEQ;
+CREATE SEQUENCE DATA_SET_PROPERTY_ID_SEQ;
+CREATE SEQUENCE DSTPT_ID_SEQ;
+
+-- Creating primary key constraints
+
+ALTER TABLE CONTROLLED_VOCABULARIES ADD CONSTRAINT COVO_PK PRIMARY KEY(ID);
+ALTER TABLE CONTROLLED_VOCABULARY_TERMS ADD CONSTRAINT CVTE_PK PRIMARY KEY(ID);
+ALTER TABLE DATA ADD CONSTRAINT DATA_PK PRIMARY KEY(ID);
+ALTER TABLE DATABASE_INSTANCES ADD CONSTRAINT DBIN_PK PRIMARY KEY(ID);
+ALTER TABLE DATA_STORES ADD CONSTRAINT DAST_PK PRIMARY KEY(ID);
+ALTER TABLE DATA_TYPES ADD CONSTRAINT DATY_PK PRIMARY KEY(ID);
+ALTER TABLE EVENTS ADD CONSTRAINT EVNT_PK PRIMARY KEY(ID);
+ALTER TABLE EXPERIMENTS ADD CONSTRAINT EXPE_PK PRIMARY KEY(ID);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_PK PRIMARY KEY(ID);
+ALTER TABLE ATTACHMENT_CONTENTS ADD CONSTRAINT EXAC_PK PRIMARY KEY(ID);
+ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_PK PRIMARY KEY(ID);
+ALTER TABLE EXPERIMENT_TYPES ADD CONSTRAINT EXTY_PK PRIMARY KEY(ID);
+ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_PK PRIMARY KEY(ID);
+ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_PK PRIMARY KEY(DATA_ID);
+ALTER TABLE FILE_FORMAT_TYPES ADD CONSTRAINT FFTY_PK PRIMARY KEY(ID);
+ALTER TABLE GROUPS ADD CONSTRAINT GROU_PK PRIMARY KEY(ID);
+ALTER TABLE INVALIDATIONS ADD CONSTRAINT INVA_PK PRIMARY KEY(ID);
+ALTER TABLE LOCATOR_TYPES ADD CONSTRAINT LOTY_PK PRIMARY KEY(ID);
+ALTER TABLE MATERIALS ADD CONSTRAINT MATE_PK PRIMARY KEY(ID);
+ALTER TABLE MATERIAL_BATCHES ADD CONSTRAINT MABA_PK PRIMARY KEY(ID);
+ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_PK PRIMARY KEY(ID);
+ALTER TABLE MATERIAL_TYPES ADD CONSTRAINT MATY_PK PRIMARY KEY(ID);
+ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_PK PRIMARY KEY(ID);
+ALTER TABLE DATA_SET_TYPES ADD CONSTRAINT DSTY_PK PRIMARY KEY(ID);
+ALTER TABLE PERSONS ADD CONSTRAINT PERS_PK PRIMARY KEY(ID);
+ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_PK PRIMARY KEY(ID);
+ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_PK PRIMARY KEY(ID);
+ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_PK PRIMARY KEY(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_PK PRIMARY KEY(ID);
+ALTER TABLE SAMPLE_MATERIAL_BATCHES ADD CONSTRAINT SAMB_PK PRIMARY KEY(SAMP_ID,MABA_ID);
+ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_PK PRIMARY KEY(ID);
+ALTER TABLE SAMPLE_TYPES ADD CONSTRAINT SATY_PK PRIMARY KEY(ID);
+ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_PK PRIMARY KEY(ID);
+ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_PK PRIMARY KEY(ID);
+ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_PK PRIMARY KEY(ID);
+
+-- Creating unique constraints
+
+ALTER TABLE CONTROLLED_VOCABULARIES ADD CONSTRAINT COVO_BK_UK UNIQUE(CODE,IS_INTERNAL_NAMESPACE,DBIN_ID);
+ALTER TABLE CONTROLLED_VOCABULARY_TERMS ADD CONSTRAINT CVTE_BK_UK UNIQUE(CODE,COVO_ID);
+ALTER TABLE DATA ADD CONSTRAINT DATA_BK_UK UNIQUE(CODE);
+ALTER TABLE DATABASE_INSTANCES ADD CONSTRAINT DBIN_BK_UK UNIQUE(CODE);
+ALTER TABLE DATABASE_INSTANCES ADD CONSTRAINT DBIN_UUID_UK UNIQUE(UUID);
+ALTER TABLE DATA_SET_RELATIONSHIPS ADD CONSTRAINT DSRE_BK_UK UNIQUE(DATA_ID_CHILD,DATA_ID_PARENT);
+ALTER TABLE DATA_STORES ADD CONSTRAINT DAST_BK_UK UNIQUE(CODE,DBIN_ID);
+ALTER TABLE DATA_TYPES ADD CONSTRAINT DATY_BK_UK UNIQUE(CODE);
+ALTER TABLE EVENTS ADD CONSTRAINT EVNT_BK_UK UNIQUE(EVENT_TYPE,DATA_ID);
+ALTER TABLE EXPERIMENTS ADD CONSTRAINT EXPE_BK_UK UNIQUE(CODE,PROJ_ID);
+ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_BK_UK UNIQUE(EXPE_ID,ETPT_ID);
+ALTER TABLE EXPERIMENT_TYPES ADD CONSTRAINT EXTY_BK_UK UNIQUE(CODE,DBIN_ID);
+ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_BK_UK UNIQUE(EXTY_ID,PRTY_ID);
+ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_BK_UK UNIQUE(LOCATION,LOTY_ID);
+ALTER TABLE FILE_FORMAT_TYPES ADD CONSTRAINT FFTY_BK_UK UNIQUE(CODE,DBIN_ID);
+ALTER TABLE GROUPS ADD CONSTRAINT GROU_BK_UK UNIQUE(CODE,DBIN_ID);
+ALTER TABLE LOCATOR_TYPES ADD CONSTRAINT LOTY_BK_UK UNIQUE(CODE);
+ALTER TABLE MATERIALS ADD CONSTRAINT MATE_BK_UK UNIQUE(CODE,MATY_ID,DBIN_ID);
+ALTER TABLE MATERIAL_BATCHES ADD CONSTRAINT MABA_BK_UK UNIQUE(CODE,MATE_ID);
+ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_BK_UK UNIQUE(MATE_ID,MTPT_ID);
+ALTER TABLE MATERIAL_TYPES ADD CONSTRAINT MATY_BK_UK UNIQUE(CODE,DBIN_ID);
+ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_BK_UK UNIQUE(MATY_ID,PRTY_ID);
+ALTER TABLE DATA_SET_TYPES ADD CONSTRAINT DSTY_BK_UK UNIQUE(CODE,DBIN_ID);
+ALTER TABLE PERSONS ADD CONSTRAINT PERS_BK_UK UNIQUE(DBIN_ID,USER_ID);
+ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_BK_UK UNIQUE(CODE,GROU_ID);
+ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_BK_UK UNIQUE(CODE,IS_INTERNAL_NAMESPACE,DBIN_ID);
+ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_GROUP_BK_UK UNIQUE(PERS_ID_GRANTEE,ROLE_CODE,GROU_ID);
+ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_INSTANCE_BK_UK UNIQUE(PERS_ID_GRANTEE,ROLE_CODE,DBIN_ID);
+ALTER TABLE SAMPLE_MATERIAL_BATCHES ADD CONSTRAINT SAMB_BK_UK UNIQUE(MABA_ID,SAMP_ID);
+ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_BK_UK UNIQUE(SAMP_ID,STPT_ID);
+ALTER TABLE SAMPLE_TYPES ADD CONSTRAINT SATY_BK_UK UNIQUE(CODE,DBIN_ID);
+ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_BK_UK UNIQUE(SATY_ID,PRTY_ID);
+ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_BK_UK UNIQUE(DSTY_ID,PRTY_ID);
+ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_BK_UK UNIQUE(DS_ID,DSTPT_ID);
+-- NOTE: following uniqueness constraints for attachments work, because (null != null) in Postgres 
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_EXPE_BK_UK UNIQUE(EXPE_ID,FILE_NAME,VERSION);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_PROJ_BK_UK UNIQUE(PROJ_ID,FILE_NAME,VERSION);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_SAMP_BK_UK UNIQUE(SAMP_ID,FILE_NAME,VERSION);
+
+
+-- Creating foreign key constraints
+
+ALTER TABLE CONTROLLED_VOCABULARIES ADD CONSTRAINT COVO_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE CONTROLLED_VOCABULARIES ADD CONSTRAINT COVO_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE CONTROLLED_VOCABULARY_TERMS ADD CONSTRAINT CVTE_COVO_FK FOREIGN KEY (COVO_ID) REFERENCES CONTROLLED_VOCABULARIES(ID);
+ALTER TABLE CONTROLLED_VOCABULARY_TERMS ADD CONSTRAINT CVTE_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE DATA ADD CONSTRAINT DATA_DSTY_FK FOREIGN KEY (DSTY_ID) REFERENCES DATA_SET_TYPES(ID);
+ALTER TABLE DATA ADD CONSTRAINT DATA_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS(ID);
+ALTER TABLE DATA ADD CONSTRAINT DATA_SAMP_FK_ACQUIRED_FROM FOREIGN KEY (SAMP_ID_ACQUIRED_FROM) REFERENCES SAMPLES(ID);
+ALTER TABLE DATA ADD CONSTRAINT DATA_SAMP_FK_DERIVED_FROM FOREIGN KEY (SAMP_ID_DERIVED_FROM) REFERENCES SAMPLES(ID);
+ALTER TABLE DATABASE_INSTANCES ADD CONSTRAINT DBIN_DAST_FK FOREIGN KEY (DAST_ID) REFERENCES DATA_STORES(ID);
+ALTER TABLE DATA_SET_RELATIONSHIPS ADD CONSTRAINT DSRE_DATA_FK_CHILD FOREIGN KEY (DATA_ID_CHILD) REFERENCES DATA(ID);
+ALTER TABLE DATA_SET_RELATIONSHIPS ADD CONSTRAINT DSRE_DATA_FK_PARENT FOREIGN KEY (DATA_ID_PARENT) REFERENCES DATA(ID);
+ALTER TABLE DATA_STORES ADD CONSTRAINT DAST_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE EVENTS ADD CONSTRAINT EVNT_DATA_FK FOREIGN KEY (DATA_ID) REFERENCES DATA(ID);
+ALTER TABLE EVENTS ADD CONSTRAINT EVNT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE EXPERIMENTS ADD CONSTRAINT EXPE_EXTY_FK FOREIGN KEY (EXTY_ID) REFERENCES EXPERIMENT_TYPES(ID);
+ALTER TABLE EXPERIMENTS ADD CONSTRAINT EXPE_INVA_FK FOREIGN KEY (INVA_ID) REFERENCES INVALIDATIONS(ID);
+ALTER TABLE EXPERIMENTS ADD CONSTRAINT EXPE_MATE_FK FOREIGN KEY (MATE_ID_STUDY_OBJECT) REFERENCES MATERIALS(ID);
+ALTER TABLE EXPERIMENTS ADD CONSTRAINT EXPE_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE EXPERIMENTS ADD CONSTRAINT EXPE_PROJ_FK FOREIGN KEY (PROJ_ID) REFERENCES PROJECTS(ID);
+ALTER TABLE EXPERIMENTS ADD CONSTRAINT EXPE_DAST_FK FOREIGN KEY (DAST_ID) REFERENCES DATA_STORES(ID);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS(ID);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_PROJ_FK FOREIGN KEY (PROJ_ID) REFERENCES PROJECTS(ID);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES(ID);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_CONT_FK FOREIGN KEY (EXAC_ID) REFERENCES ATTACHMENT_CONTENTS(ID);
+ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_CVTE_FK FOREIGN KEY (CVTE_ID) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID);
+ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_ETPT_FK FOREIGN KEY (ETPT_ID) REFERENCES EXPERIMENT_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE;
+ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS(ID);
+ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_MAPR_FK FOREIGN KEY (MATE_PROP_ID) REFERENCES MATERIALS(ID);
+ALTER TABLE EXPERIMENT_TYPES ADD CONSTRAINT EXTY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_EXTY_FK FOREIGN KEY (EXTY_ID) REFERENCES EXPERIMENT_TYPES(ID);
+ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_PRTY_FK FOREIGN KEY (PRTY_ID) REFERENCES PROPERTY_TYPES(ID);
+ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_CVTE_FK FOREIGN KEY (CVTE_ID_STOR_FMT) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID);
+ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_CVTE_STORED_ON_FK FOREIGN KEY (CVTE_ID_STORE) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID);
+ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_DATA_FK FOREIGN KEY (DATA_ID) REFERENCES DATA(ID);
+ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_FFTY_FK FOREIGN KEY (FFTY_ID) REFERENCES FILE_FORMAT_TYPES(ID);
+ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_LOTY_FK FOREIGN KEY (LOTY_ID) REFERENCES LOCATOR_TYPES(ID);
+ALTER TABLE FILE_FORMAT_TYPES ADD CONSTRAINT FFTY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE GROUPS ADD CONSTRAINT GROU_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE GROUPS ADD CONSTRAINT GROU_GROU_FK FOREIGN KEY (GROU_ID_PARENT) REFERENCES GROUPS(ID);
+ALTER TABLE GROUPS ADD CONSTRAINT GROU_PERS_FK_LEADER FOREIGN KEY (PERS_ID_LEADER) REFERENCES PERSONS(ID);
+ALTER TABLE GROUPS ADD CONSTRAINT GROU_PERS_FK_REGISTERER FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE GROUPS ADD CONSTRAINT GROU_DAST_FK FOREIGN KEY (DAST_ID) REFERENCES DATA_STORES(ID);
+ALTER TABLE INVALIDATIONS ADD CONSTRAINT INVA_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE MATERIALS ADD CONSTRAINT MATE_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE MATERIALS ADD CONSTRAINT MATE_MATE_FK FOREIGN KEY (MATE_ID_INHIBITOR_OF) REFERENCES MATERIALS(ID);
+ALTER TABLE MATERIALS ADD CONSTRAINT MATE_MATY_FK FOREIGN KEY (MATY_ID) REFERENCES MATERIAL_TYPES(ID);
+ALTER TABLE MATERIALS ADD CONSTRAINT MATE_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE MATERIAL_BATCHES ADD CONSTRAINT MABA_MATE_FK FOREIGN KEY (MATE_ID) REFERENCES MATERIALS(ID);
+ALTER TABLE MATERIAL_BATCHES ADD CONSTRAINT MABA_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_CVTE_FK FOREIGN KEY (CVTE_ID) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID);
+ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_MAPR_FK FOREIGN KEY (MATE_PROP_ID) REFERENCES MATERIALS(ID);
+ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_MATE_FK FOREIGN KEY (MATE_ID) REFERENCES MATERIALS(ID);
+ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_MTPT_FK FOREIGN KEY (MTPT_ID) REFERENCES MATERIAL_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE;
+ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE MATERIAL_TYPES ADD CONSTRAINT MATY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_MATY_FK FOREIGN KEY (MATY_ID) REFERENCES MATERIAL_TYPES(ID);
+ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_PRTY_FK FOREIGN KEY (PRTY_ID) REFERENCES PROPERTY_TYPES(ID);
+ALTER TABLE DATA_SET_TYPES ADD CONSTRAINT DSTY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE PERSONS ADD CONSTRAINT PERS_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE PERSONS ADD CONSTRAINT PERS_GROU_FK FOREIGN KEY (GROU_ID) REFERENCES GROUPS(ID);
+ALTER TABLE PERSONS ADD CONSTRAINT PERS_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_GROU_FK FOREIGN KEY (GROU_ID) REFERENCES GROUPS(ID);
+ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_PERS_FK_LEADER FOREIGN KEY (PERS_ID_LEADER) REFERENCES PERSONS(ID);
+ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_PERS_FK_REGISTERER FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_DAST_FK FOREIGN KEY (DAST_ID) REFERENCES DATA_STORES(ID);
+ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_COVO_FK FOREIGN KEY (COVO_ID) REFERENCES CONTROLLED_VOCABULARIES(ID);
+ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_DATY_FK FOREIGN KEY (DATY_ID) REFERENCES DATA_TYPES(ID);
+ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_MATY_FK FOREIGN KEY (MATY_PROP_ID) REFERENCES MATERIAL_TYPES(ID);
+ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_GROU_FK FOREIGN KEY (GROU_ID) REFERENCES GROUPS(ID);
+ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_PERS_FK_GRANTEE FOREIGN KEY (PERS_ID_GRANTEE) REFERENCES PERSONS(ID);
+ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_PERS_FK_REGISTERER FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_GROU_FK FOREIGN KEY (GROU_ID) REFERENCES GROUPS(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_INVA_FK FOREIGN KEY (INVA_ID) REFERENCES INVALIDATIONS(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_SAMP_FK_CONTROL_LAYOUT FOREIGN KEY (SAMP_ID_CONTROL_LAYOUT) REFERENCES SAMPLES(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_SAMP_FK_GENERATED_FROM FOREIGN KEY (SAMP_ID_GENERATED_FROM) REFERENCES SAMPLES(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_SAMP_FK_PART_OF FOREIGN KEY (SAMP_ID_PART_OF) REFERENCES SAMPLES(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_SAMP_FK_TOP FOREIGN KEY (SAMP_ID_TOP) REFERENCES SAMPLES(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS(ID);
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_SATY_FK FOREIGN KEY (SATY_ID) REFERENCES SAMPLE_TYPES(ID);
+ALTER TABLE SAMPLE_MATERIAL_BATCHES ADD CONSTRAINT SAMB_MABA_FK FOREIGN KEY (MABA_ID) REFERENCES MATERIAL_BATCHES(ID);
+ALTER TABLE SAMPLE_MATERIAL_BATCHES ADD CONSTRAINT SAMB_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES(ID);
+ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_CVTE_FK FOREIGN KEY (CVTE_ID) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID);
+ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_MAPR_FK FOREIGN KEY (MATE_PROP_ID) REFERENCES MATERIALS(ID);
+ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES(ID);
+ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_STPT_FK FOREIGN KEY (STPT_ID) REFERENCES SAMPLE_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE;
+ALTER TABLE SAMPLE_TYPES ADD CONSTRAINT SATY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID);
+ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_PRTY_FK FOREIGN KEY (PRTY_ID) REFERENCES PROPERTY_TYPES(ID);
+ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_SATY_FK FOREIGN KEY (SATY_ID) REFERENCES SAMPLE_TYPES(ID);
+ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_DSTY_FK FOREIGN KEY (DSTY_ID) REFERENCES DATA_SET_TYPES(ID);
+ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_PRTY_FK FOREIGN KEY (PRTY_ID) REFERENCES PROPERTY_TYPES(ID);
+ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_CVTE_FK FOREIGN KEY (CVTE_ID) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID);
+ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_DSTPT_FK FOREIGN KEY (DSTPT_ID) REFERENCES DATA_SET_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE;
+ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_DS_FK FOREIGN KEY (DS_ID) REFERENCES DATA(ID);
+ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID);
+ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_MAPR_FK FOREIGN KEY (MATE_PROP_ID) REFERENCES MATERIALS(ID);
+
+-- Creating check constraints
+
+ALTER TABLE DATA ADD CONSTRAINT DATA_SAMP_ARC_CK CHECK ((SAMP_ID_ACQUIRED_FROM IS NOT NULL AND SAMP_ID_DERIVED_FROM IS NULL) OR (SAMP_ID_ACQUIRED_FROM IS NULL AND SAMP_ID_DERIVED_FROM IS NOT NULL));
+ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_CK CHECK 
+	((VALUE IS NOT NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NULL) OR 
+	 (VALUE IS NULL AND CVTE_ID IS NOT NULL AND MATE_PROP_ID IS NULL) OR
+	 (VALUE IS NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NOT NULL)
+	);
+ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_DBIN_GROU_ARC_CK CHECK ((DBIN_ID IS NOT NULL AND GROU_ID IS NULL) OR (DBIN_ID IS NULL AND GROU_ID IS NOT NULL));
+ALTER TABLE SAMPLES ADD CONSTRAINT SAMP_DBIN_GROU_ARC_CK CHECK ((DBIN_ID IS NOT NULL AND GROU_ID IS NULL) OR (DBIN_ID IS NULL AND GROU_ID IS NOT NULL));
+ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_CK CHECK 
+	((VALUE IS NOT NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NULL) OR 
+	 (VALUE IS NULL AND CVTE_ID IS NOT NULL AND MATE_PROP_ID IS NULL) OR
+	 (VALUE IS NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NOT NULL)
+	);
+ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_CK CHECK 
+	((VALUE IS NOT NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NULL) OR 
+	 (VALUE IS NULL AND CVTE_ID IS NOT NULL AND MATE_PROP_ID IS NULL) OR
+	 (VALUE IS NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NOT NULL)
+	);
+ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_CK CHECK 
+	((VALUE IS NOT NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NULL) OR 
+	 (VALUE IS NULL AND CVTE_ID IS NOT NULL AND MATE_PROP_ID IS NULL) OR
+	 (VALUE IS NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NOT NULL)
+	);
+ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_ARC_CK CHECK 
+	((EXPE_ID IS NOT NULL AND PROJ_ID IS NULL AND SAMP_ID IS NULL) OR 
+	 (EXPE_ID IS NULL AND PROJ_ID IS NOT NULL AND SAMP_ID IS NULL) OR
+	 (EXPE_ID IS NULL AND PROJ_ID IS NULL AND SAMP_ID IS NOT NULL)
+	);
+
+-- Creating indices
+
+CREATE INDEX COVO_PERS_FK_I ON CONTROLLED_VOCABULARIES (PERS_ID_REGISTERER);
+CREATE INDEX CVTE_COVO_FK_I ON CONTROLLED_VOCABULARY_TERMS (COVO_ID);
+CREATE INDEX CVTE_PERS_FK_I ON CONTROLLED_VOCABULARY_TERMS (PERS_ID_REGISTERER);
+CREATE INDEX DATA_DSTY_FK_I ON DATA (DSTY_ID);
+CREATE INDEX DATA_SAMP_FK_I_ACQUIRED_FROM ON DATA (SAMP_ID_ACQUIRED_FROM);
+CREATE INDEX DATA_SAMP_FK_I_DERIVED_FROM ON DATA (SAMP_ID_DERIVED_FROM);
+CREATE INDEX DATA_EXPE_FK_I ON DATA (EXPE_ID);
+CREATE INDEX DAST_DBIN_FK_I ON DATA_STORES (DBIN_ID);
+CREATE INDEX DSRE_DATA_FK_I_CHILD ON DATA_SET_RELATIONSHIPS (DATA_ID_CHILD);
+CREATE INDEX DSRE_DATA_FK_I_PARENT ON DATA_SET_RELATIONSHIPS (DATA_ID_PARENT);
+CREATE INDEX ETPT_EXTY_FK_I ON EXPERIMENT_TYPE_PROPERTY_TYPES (EXTY_ID);
+CREATE INDEX ETPT_PERS_FK_I ON EXPERIMENT_TYPE_PROPERTY_TYPES (PERS_ID_REGISTERER);
+CREATE INDEX ETPT_PRTY_FK_I ON EXPERIMENT_TYPE_PROPERTY_TYPES (PRTY_ID);
+CREATE INDEX EVNT_DATA_FK_I ON EVENTS (DATA_ID);
+CREATE INDEX EVNT_PERS_FK_I ON EVENTS (PERS_ID_REGISTERER);
+CREATE INDEX ATTA_EXPE_FK_I ON ATTACHMENTS (EXPE_ID);
+CREATE INDEX ATTA_SAMP_FK_I ON ATTACHMENTS (SAMP_ID);
+CREATE INDEX ATTA_PROJ_FK_I ON ATTACHMENTS (PROJ_ID);
+CREATE INDEX ATTA_PERS_FK_I ON ATTACHMENTS (PERS_ID_REGISTERER);
+CREATE INDEX ATTA_EXAC_FK_I ON ATTACHMENTS (EXAC_ID);
+CREATE INDEX EXDA_CVTE_FK_I ON EXTERNAL_DATA (CVTE_ID_STOR_FMT);
+CREATE INDEX EXDA_CVTE_STORED_ON_FK_I ON EXTERNAL_DATA (CVTE_ID_STORE);
+CREATE INDEX EXDA_FFTY_FK_I ON EXTERNAL_DATA (FFTY_ID);
+CREATE INDEX EXDA_LOTY_FK_I ON EXTERNAL_DATA (LOTY_ID);
+CREATE INDEX EXPE_EXTY_FK_I ON EXPERIMENTS (EXTY_ID);
+CREATE INDEX EXPE_INVA_FK_I ON EXPERIMENTS (INVA_ID);
+CREATE INDEX EXPE_MATE_FK_I ON EXPERIMENTS (MATE_ID_STUDY_OBJECT);
+CREATE INDEX EXPE_PERS_FK_I ON EXPERIMENTS (PERS_ID_REGISTERER);
+CREATE INDEX EXPE_PROJ_FK_I ON EXPERIMENTS (PROJ_ID);
+CREATE INDEX EXPR_CVTE_FK_I ON EXPERIMENT_PROPERTIES (CVTE_ID);
+CREATE INDEX EXPR_ETPT_FK_I ON EXPERIMENT_PROPERTIES (ETPT_ID);
+CREATE INDEX EXPR_EXPE_FK_I ON EXPERIMENT_PROPERTIES (EXPE_ID);
+CREATE INDEX EXPR_PERS_FK_I ON EXPERIMENT_PROPERTIES (PERS_ID_REGISTERER);
+CREATE INDEX GROU_DBIN_FK_I ON GROUPS (DBIN_ID);
+CREATE INDEX GROU_GROU_FK_I ON GROUPS (GROU_ID_PARENT);
+CREATE INDEX GROU_PERS_FK_I ON GROUPS (PERS_ID_LEADER);
+CREATE INDEX GROU_PERS_REGISTERED_BY_FK_I ON GROUPS (PERS_ID_REGISTERER);
+CREATE INDEX INVA_PERS_FK_I ON INVALIDATIONS (PERS_ID_REGISTERER);
+CREATE INDEX MABA_MATE_FK_I ON MATERIAL_BATCHES (MATE_ID);
+CREATE INDEX MABA_PERS_FK_I ON MATERIAL_BATCHES (PERS_ID_REGISTERER);
+CREATE INDEX MAPR_CVTE_FK_I ON MATERIAL_PROPERTIES (CVTE_ID);
+CREATE INDEX MAPR_MATE_FK_I ON MATERIAL_PROPERTIES (MATE_ID);
+CREATE INDEX MAPR_MTPT_FK_I ON MATERIAL_PROPERTIES (MTPT_ID);
+CREATE INDEX MAPR_PERS_FK_I ON MATERIAL_PROPERTIES (PERS_ID_REGISTERER);
+CREATE INDEX MATE_MATE_FK_I ON MATERIALS (MATE_ID_INHIBITOR_OF);
+CREATE INDEX MATE_MATY_FK_I ON MATERIALS (MATY_ID);
+CREATE INDEX MATE_PERS_FK_I ON MATERIALS (PERS_ID_REGISTERER);
+CREATE INDEX MTPT_MATY_FK_I ON MATERIAL_TYPE_PROPERTY_TYPES (MATY_ID);
+CREATE INDEX MTPT_PERS_FK_I ON MATERIAL_TYPE_PROPERTY_TYPES (PERS_ID_REGISTERER);
+CREATE INDEX MTPT_PRTY_FK_I ON MATERIAL_TYPE_PROPERTY_TYPES (PRTY_ID);
+CREATE INDEX PERS_GROU_FK_I ON PERSONS (GROU_ID);
+CREATE INDEX PROJ_GROU_FK_I ON PROJECTS (GROU_ID);
+CREATE INDEX PROJ_PERS_FK_I_LEADER ON PROJECTS (PERS_ID_LEADER);
+CREATE INDEX PROJ_PERS_FK_I_REGISTERER ON PROJECTS (PERS_ID_REGISTERER);
+CREATE INDEX PRTY_COVO_FK_I ON PROPERTY_TYPES (COVO_ID);
+CREATE INDEX PRTY_DATY_FK_I ON PROPERTY_TYPES (DATY_ID);
+CREATE INDEX PRTY_PERS_FK_I ON PROPERTY_TYPES (PERS_ID_REGISTERER);
+CREATE INDEX ROAS_DBIN_FK_I ON ROLE_ASSIGNMENTS (DBIN_ID);
+CREATE INDEX ROAS_GROU_FK_I ON ROLE_ASSIGNMENTS (GROU_ID);
+CREATE INDEX ROAS_PERS_FK_I_GRANTEE ON ROLE_ASSIGNMENTS (PERS_ID_GRANTEE);
+CREATE INDEX ROAS_PERS_FK_I_REGISTERER ON ROLE_ASSIGNMENTS (PERS_ID_REGISTERER);
+CREATE INDEX SAMB_MABA_FK_I ON SAMPLE_MATERIAL_BATCHES (MABA_ID);
+CREATE INDEX SAMB_SAMP_FK_I ON SAMPLE_MATERIAL_BATCHES (SAMP_ID);
+CREATE INDEX SAMP_INVA_FK_I ON SAMPLES (INVA_ID);
+CREATE INDEX SAMP_PERS_FK_I ON SAMPLES (PERS_ID_REGISTERER);
+CREATE INDEX SAMP_SAMP_FK_I_CONTROL_LAYOUT ON SAMPLES (SAMP_ID_CONTROL_LAYOUT);
+CREATE INDEX SAMP_SAMP_FK_I_GENERATED_FROM ON SAMPLES (SAMP_ID_GENERATED_FROM);
+CREATE INDEX SAMP_SAMP_FK_I_PART_OF ON SAMPLES (SAMP_ID_PART_OF);
+CREATE INDEX SAMP_SAMP_FK_I_TOP ON SAMPLES (SAMP_ID_TOP);
+CREATE INDEX SAMP_EXPE_FK_I ON SAMPLES (EXPE_ID);
+CREATE INDEX SAMP_CODE_I ON SAMPLES (CODE);
+CREATE INDEX SAMP_SATY_FK_I ON SAMPLES (SATY_ID);
+CREATE INDEX SAPR_CVTE_FK_I ON SAMPLE_PROPERTIES (CVTE_ID);
+CREATE INDEX SAPR_PERS_FK_I ON SAMPLE_PROPERTIES (PERS_ID_REGISTERER);
+CREATE INDEX SAPR_SAMP_FK_I ON SAMPLE_PROPERTIES (SAMP_ID);
+CREATE INDEX SAPR_STPT_FK_I ON SAMPLE_PROPERTIES (STPT_ID);
+CREATE INDEX STPT_PERS_FK_I ON SAMPLE_TYPE_PROPERTY_TYPES (PERS_ID_REGISTERER);
+CREATE INDEX STPT_PRTY_FK_I ON SAMPLE_TYPE_PROPERTY_TYPES (PRTY_ID);
+CREATE INDEX STPT_SATY_FK_I ON SAMPLE_TYPE_PROPERTY_TYPES (SATY_ID);
+CREATE INDEX DSPR_CVTE_FK_I ON DATA_SET_PROPERTIES (CVTE_ID);
+CREATE INDEX DSPR_DSTPT_FK_I ON DATA_SET_PROPERTIES (DSTPT_ID);
+CREATE INDEX DSPR_DS_FK_I ON DATA_SET_PROPERTIES (DS_ID);
+CREATE INDEX DSPR_PERS_FK_I ON DATA_SET_PROPERTIES (PERS_ID_REGISTERER);
+CREATE INDEX DSTPT_DSTY_FK_I ON DATA_SET_TYPE_PROPERTY_TYPES (DSTY_ID);
+CREATE INDEX DSTPT_PERS_FK_I ON DATA_SET_TYPE_PROPERTY_TYPES (PERS_ID_REGISTERER);
+CREATE INDEX DSTPT_PRTY_FK_I ON DATA_SET_TYPE_PROPERTY_TYPES (PRTY_ID);
+

openbis/source/sql/postgresql/032/function-032.sql

+-- Creating Functions
+
+------------------------------------------------------------------------------------
+--  Purpose:  Create function RENAME_SEQUENCE() that is required for renaming the sequences belonging to tables
+------------------------------------------------------------------------------------
+CREATE FUNCTION RENAME_SEQUENCE(OLD_NAME VARCHAR, NEW_NAME VARCHAR) RETURNS INTEGER AS $$
+DECLARE
+  CURR_SEQ_VAL   INTEGER;
+BEGIN
+  SELECT INTO CURR_SEQ_VAL NEXTVAL(OLD_NAME);
+  EXECUTE 'CREATE SEQUENCE ' || NEW_NAME || ' START WITH ' || CURR_SEQ_VAL;
+  EXECUTE 'DROP SEQUENCE ' || OLD_NAME;
+  RETURN CURR_SEQ_VAL;
+END;
+$$ LANGUAGE 'plpgsql';
+
+
+------------------------------------------------------------------------------------
+--  Purpose:  Create trigger CONTROLLED_VOCABULARY_CHECK 
+------------------------------------------------------------------------------------
+
+CREATE OR REPLACE FUNCTION CONTROLLED_VOCABULARY_CHECK() RETURNS trigger AS $$
+DECLARE
+   v_code  CODE;
+BEGIN
+
+   select code into v_code from data_types where id = NEW.daty_id;
+
+   -- Check if the data is of type "CONTROLLEDVOCABULARY"
+   if v_code = 'CONTROLLEDVOCABULARY' then
+      if NEW.covo_id IS NULL then
+         RAISE EXCEPTION 'Insert/Update of Property Type (Code: %) failed, as its Data Type is CONTROLLEDVOCABULARY, but it is not linked to a Controlled Vocabulary.', NEW.code;
+      end if;
+   end if;
+
+   RETURN NEW;
+
+END;
+$$ LANGUAGE 'plpgsql';
+
+CREATE TRIGGER CONTROLLED_VOCABULARY_CHECK BEFORE INSERT OR UPDATE ON PROPERTY_TYPES
+    FOR EACH ROW EXECUTE PROCEDURE CONTROLLED_VOCABULARY_CHECK();
+
+
+------------------------------------------------------------------------------------
+--  Purpose:  Create trigger EXTERNAL_DATA_STORAGE_FORMAT_CHECK 
+------------------------------------------------------------------------------------
+
+CREATE OR REPLACE FUNCTION EXTERNAL_DATA_STORAGE_FORMAT_CHECK() RETURNS trigger AS $$
+DECLARE
+   v_covo_code  CODE;
+   data_code CODE;
+BEGIN
+
+   select code into v_covo_code from controlled_vocabularies
+      where is_internal_namespace = true and 
+         id = (select covo_id from controlled_vocabulary_terms where id = NEW.cvte_id_stor_fmt);
+   -- Check if the data storage format is a term of the controlled vocabulary "STORAGE_FORMAT"
+   if v_covo_code != 'STORAGE_FORMAT' then
+      select code into data_code from data where id = NEW.data_id; 
+      RAISE EXCEPTION 'Insert/Update of Data (Code: %) failed, as its Storage Format is %, but is required to be STORAGE_FORMAT.', data_code, v_covo_code;
+   end if;
+
+   RETURN NEW;
+
+END;
+$$ LANGUAGE 'plpgsql';
+
+CREATE TRIGGER EXTERNAL_DATA_STORAGE_FORMAT_CHECK BEFORE INSERT OR UPDATE ON EXTERNAL_DATA
+    FOR EACH ROW EXECUTE PROCEDURE EXTERNAL_DATA_STORAGE_FORMAT_CHECK();
+
+   
+------------------------------------------------------------------------------------
+--  Purpose:  Create trigger SAMPLE_CODE_UNIQUENESS_CHECK 
+------------------------------------------------------------------------------------
+
+CREATE OR REPLACE FUNCTION SAMPLE_CODE_UNIQUENESS_CHECK() RETURNS trigger AS $$
+DECLARE
+   counter  INTEGER;
+BEGIN
+	IF (NEW.samp_id_part_of is NULL) THEN
+		IF (NEW.dbin_id is not NULL) THEN
+			SELECT count(*) into counter FROM samples 
+				where id != NEW.id and code = NEW.code and samp_id_part_of is NULL and dbin_id = NEW.dbin_id;
+			IF (counter > 0) THEN
+				RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because database instance sample with the same code already exists.', NEW.code;
+			END IF;
+		ELSIF (NEW.grou_id is not NULL) THEN
+			SELECT count(*) into counter FROM samples 
+				where id != NEW.id and code = NEW.code and samp_id_part_of is NULL and grou_id = NEW.grou_id;
+			IF (counter > 0) THEN
+				RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because group sample with the same code already exists.', NEW.code;
+			END IF;
+		END IF;
+        ELSE
+		IF (NEW.dbin_id is not NULL) THEN
+			SELECT count(*) into counter FROM samples 
+				where id != NEW.id and code = NEW.code and samp_id_part_of = NEW.samp_id_part_of and dbin_id = NEW.dbin_id;
+			IF (counter > 0) THEN
+				RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because database instance sample with the same code and being the part of the same parent already exists.', NEW.code;
+			END IF;
+		ELSIF (NEW.grou_id is not NULL) THEN
+			SELECT count(*) into counter FROM samples 
+				where id != NEW.id and code = NEW.code and samp_id_part_of = NEW.samp_id_part_of and grou_id = NEW.grou_id;
+			IF (counter > 0) THEN
+				RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because group sample with the same code and being the part of the same parent already exists.', NEW.code;
+			END IF;
+		END IF;
+        END IF;   
+   RETURN NEW;
+END;
+$$ LANGUAGE 'plpgsql';
+
+CREATE TRIGGER SAMPLE_CODE_UNIQUENESS_CHECK BEFORE INSERT OR UPDATE ON SAMPLES
+    FOR EACH ROW EXECUTE PROCEDURE SAMPLE_CODE_UNIQUENESS_CHECK();
+    
+------------------------------------------------------------------------------------
+--  Purpose:  Create trigger MATERIAL/SAMPLE/EXPERIMENT/DATA_SET _PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK
+--            It checks that if material property value is assigned to the entity,
+--						then the material type is equal to the one described by property type.
+------------------------------------------------------------------------------------
+
+CREATE OR REPLACE FUNCTION MATERIAL_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK() RETURNS trigger AS $$
+DECLARE
+   v_type_id  CODE;
+   v_type_id_prop  CODE;
+BEGIN
+   if NEW.mate_prop_id IS NOT NULL then
+			-- find material type id of the property type 
+			select pt.maty_prop_id into v_type_id_prop 
+			  from material_type_property_types etpt, property_types pt 
+			 where NEW.mtpt_id = etpt.id AND etpt.prty_id = pt.id;
+		
+			if v_type_id_prop IS NOT NULL then
+				-- find material type id of the material which consists the entity's property value
+				select entity.maty_id into v_type_id 
+				  from materials entity
+				 where NEW.mate_prop_id = entity.id;
+				if v_type_id != v_type_id_prop then
+					RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).', 
+							 NEW.mate_prop_id, v_type_id, v_type_id_prop;
+				end if;
+			end if;
+   end if;
+   RETURN NEW;
+END;
+$$ LANGUAGE 'plpgsql';
+
+CREATE TRIGGER MATERIAL_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK BEFORE INSERT OR UPDATE ON material_properties
+    FOR EACH ROW EXECUTE PROCEDURE MATERIAL_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK();
+    
+CREATE OR REPLACE FUNCTION SAMPLE_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK() RETURNS trigger AS $$
+DECLARE
+   v_type_id  CODE;
+   v_type_id_prop  CODE;
+BEGIN
+   if NEW.mate_prop_id IS NOT NULL then
+			-- find material type id of the property type 
+			select pt.maty_prop_id into v_type_id_prop 
+			  from sample_type_property_types etpt, property_types pt 
+			 where NEW.stpt_id = etpt.id AND etpt.prty_id = pt.id;
+		
+			if v_type_id_prop IS NOT NULL then
+				-- find material type id of the material which consists the entity's property value
+				select entity.maty_id into v_type_id 
+				  from materials entity
+				 where NEW.mate_prop_id = entity.id;
+				if v_type_id != v_type_id_prop then
+					RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).', 
+												 NEW.mate_prop_id, v_type_id, v_type_id_prop;
+				end if;
+			end if;
+   end if;
+   RETURN NEW;
+END;
+$$ LANGUAGE 'plpgsql';
+
+CREATE TRIGGER SAMPLE_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK BEFORE INSERT OR UPDATE ON sample_properties
+    FOR EACH ROW EXECUTE PROCEDURE SAMPLE_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK();
+    
+CREATE OR REPLACE FUNCTION EXPERIMENT_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK() RETURNS trigger AS $$
+DECLARE
+   v_type_id  CODE;
+   v_type_id_prop  CODE;
+BEGIN
+   if NEW.mate_prop_id IS NOT NULL then
+			-- find material type id of the property type 
+			select pt.maty_prop_id into v_type_id_prop 
+			  from experiment_type_property_types etpt, property_types pt 
+			 where NEW.etpt_id = etpt.id AND etpt.prty_id = pt.id;
+		
+			if v_type_id_prop IS NOT NULL then
+				-- find material type id of the material which consists the entity's property value
+				select entity.maty_id into v_type_id 
+				  from materials entity
+				 where NEW.mate_prop_id = entity.id;
+				if v_type_id != v_type_id_prop then
+					RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).', 
+												 NEW.mate_prop_id, v_type_id, v_type_id_prop;
+				end if;
+			end if;
+   end if;
+   RETURN NEW;
+END;
+$$ LANGUAGE 'plpgsql';
+
+CREATE TRIGGER EXPERIMENT_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK BEFORE INSERT OR UPDATE ON experiment_properties
+    FOR EACH ROW EXECUTE PROCEDURE EXPERIMENT_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK();
+ 
+ -- data set
+CREATE OR REPLACE FUNCTION DATA_SET_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK() RETURNS trigger AS $$
+DECLARE
+   v_type_id  CODE;
+   v_type_id_prop  CODE;
+BEGIN
+   if NEW.mate_prop_id IS NOT NULL then
+			-- find material type id of the property type 
+			select pt.maty_prop_id into v_type_id_prop 
+			  from data_set_type_property_types dstpt, property_types pt 
+			 where NEW.dstpt_id = dstpt.id AND dstpt.prty_id = pt.id;
+		
+			if v_type_id_prop IS NOT NULL then
+				-- find material type id of the material which consists the entity's property value
+				select entity.maty_id into v_type_id 
+				  from materials entity
+				 where NEW.mate_prop_id = entity.id;
+				if v_type_id != v_type_id_prop then
+					RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).', 
+												 NEW.mate_prop_id, v_type_id, v_type_id_prop;
+				end if;
+			end if;
+   end if;
+   RETURN NEW;
+END;
+$$ LANGUAGE 'plpgsql';
+
+CREATE TRIGGER DATA_SET_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK BEFORE INSERT OR UPDATE ON data_set_properties
+    FOR EACH ROW EXECUTE PROCEDURE DATA_SET_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK();   
\ No newline at end of file

openbis/source/sql/postgresql/migration/migration-031-032.sql

+-- -------
+-- Modify MATERIAL_BATCHES
+-- -------
+
+ALTER TABLE material_batches
+    DROP COLUMN proc_id;
+
+-- -------
+-- Modify SAMPLES
+-- -------
+
+ALTER TABLE samples
+    ADD COLUMN expe_id tech_id;
+
+ALTER TABLE samples
+    ADD CONSTRAINT samp_expe_fk FOREIGN KEY (expe_id) REFERENCES experiments(id);
+
+CREATE INDEX samp_expe_fk_i ON samples USING btree (expe_id);
+
+-- relink samples directly to experiments
+
+UPDATE samples
+SET expe_id = (SELECT e.id FROM experiments e, procedures p, sample_inputs si 
+               WHERE si.samp_id = samples.id AND si.proc_id = p.id AND p.expe_id = e.id AND e.inva_id IS NULL);
+
+
+-- -------
+-- Modify DATA
+-- -------
+
+ALTER TABLE data
+    ADD COLUMN expe_id tech_id;
+
+ALTER TABLE data
+    ADD CONSTRAINT data_expe_fk FOREIGN KEY (expe_id) REFERENCES experiments(id);
+
+CREATE INDEX data_expe_fk_i ON data USING btree (expe_id);
+
+UPDATE data
+SET expe_id = (SELECT e.id FROM experiments e, procedures p 
+               WHERE data.proc_id_produced_by = p.id AND p.expe_id = e.id);
+
+ALTER TABLE data
+    ALTER COLUMN expe_id SET NOT NULL;
+
+ALTER TABLE data
+    DROP COLUMN proc_id_produced_by;
+
+-- -------
+-- Drop PROCEDURES, PROCEDURE_TYPES, and SAMPLE_INPUTS
+-- -------
+
+DROP TABLE sample_inputs;
+DROP TABLE procedures;
+DROP TABLE procedure_types;
+
+DROP SEQUENCE procedure_id_seq;
+DROP SEQUENCE procedure_type_id_seq;
+
+
+