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SET statement_timeout = 0;
SET standard_conforming_strings = off;
SET check_function_bodies = false;
SET client_min_messages = warning;
SET escape_string_warning = off;
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SET search_path = public, pg_catalog;
CREATE DOMAIN archiving_status AS character varying(100)
CONSTRAINT archiving_status_check CHECK (((VALUE)::text = ANY (ARRAY[('LOCKED'::character varying)::text, ('AVAILABLE'::character varying)::text, ('ARCHIVED'::character varying)::text, ('ARCHIVE_PENDING'::character varying)::text, ('UNARCHIVE_PENDING'::character varying)::text, ('BACKUP_PENDING'::character varying)::text])));
CREATE DOMAIN authorization_role AS character varying(40)
CONSTRAINT authorization_role_check CHECK (((VALUE)::text = ANY (ARRAY[('ADMIN'::character varying)::text, ('POWER_USER'::character varying)::text, ('USER'::character varying)::text, ('OBSERVER'::character varying)::text, ('ETL_SERVER'::character varying)::text])));
CREATE DOMAIN boolean_char AS boolean DEFAULT false;
CREATE DOMAIN boolean_char_or_unknown AS character(1) DEFAULT 'U'::bpchar
CONSTRAINT boolean_char_or_unknown_check CHECK ((VALUE = ANY (ARRAY['F'::bpchar, 'T'::bpchar, 'U'::bpchar])));
CREATE DOMAIN code AS character varying(60);
CREATE DOMAIN column_label AS character varying(128);
CREATE DOMAIN data_store_service_kind AS character varying(40)
CONSTRAINT data_store_service_kind_check CHECK (((VALUE)::text = ANY (ARRAY[('PROCESSING'::character varying)::text, ('QUERIES'::character varying)::text])));
CREATE DOMAIN data_store_service_reporting_plugin_type AS character varying(40)
CONSTRAINT data_store_service_reporting_plugin_type_check CHECK (((VALUE)::text = ANY (ARRAY[('TABLE_MODEL'::character varying)::text, ('DSS_LINK'::character varying)::text])));
CREATE DOMAIN description_2000 AS character varying(2000);
CREATE DOMAIN entity_kind AS character varying(40)
CONSTRAINT entity_kind_check CHECK (((VALUE)::text = ANY (ARRAY[('SAMPLE'::character varying)::text, ('EXPERIMENT'::character varying)::text, ('DATA_SET'::character varying)::text, ('MATERIAL'::character varying)::text])));
CREATE DOMAIN event_type AS character varying(40)
CONSTRAINT event_type_check CHECK (((VALUE)::text = ANY (ARRAY[('DELETION'::character varying)::text, ('MOVEMENT'::character varying)::text])));
CREATE DOMAIN file AS bytea;
CREATE DOMAIN file_name AS character varying(100);
CREATE DOMAIN grid_expression AS character varying(2000);
CREATE DOMAIN grid_id AS character varying(200);
CREATE DOMAIN object_name AS character varying(50);
CREATE DOMAIN ordinal_int AS bigint
CONSTRAINT ordinal_int_check CHECK ((VALUE > 0));
CREATE DOMAIN query_type AS character varying(40)
CONSTRAINT query_type_check CHECK (((VALUE)::text = ANY (ARRAY[('GENERIC'::character varying)::text, ('EXPERIMENT'::character varying)::text, ('SAMPLE'::character varying)::text, ('DATA_SET'::character varying)::text, ('MATERIAL'::character varying)::text])));
CREATE DOMAIN real_value AS real;
CREATE DOMAIN script_type AS character varying(40)
CONSTRAINT script_type_check CHECK (((VALUE)::text = ANY (ARRAY[('DYNAMIC_PROPERTY'::character varying)::text, ('MANAGED_PROPERTY'::character varying)::text])));
CREATE DOMAIN tech_id AS bigint;
CREATE DOMAIN text_value AS text;
CREATE DOMAIN time_stamp AS timestamp with time zone;
CREATE DOMAIN time_stamp_dfl AS timestamp with time zone NOT NULL DEFAULT now();
CREATE DOMAIN title_100 AS character varying(100);
CREATE DOMAIN user_id AS character varying(50);
CREATE FUNCTION check_created_or_modified_data_set_owner_is_alive() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
owner_code CODE;
owner_del_id TECH_ID;
BEGIN
IF (NEW.del_id IS NOT NULL) THEN
RETURN NEW;
END IF;
-- check sample
IF (NEW.samp_id IS NOT NULL) THEN
SELECT del_id, code INTO owner_del_id, owner_code
FROM samples
WHERE id = NEW.samp_id;
IF (owner_del_id IS NOT NULL) THEN
RAISE EXCEPTION 'Data Set (Code: %) cannot be connected to a Sample (Code: %) %.',
NEW.code, owner_code, deletion_description(owner_del_id);
END IF;
END IF;
-- check experiment
SELECT del_id, code INTO owner_del_id, owner_code
FROM experiments
WHERE id = NEW.expe_id;
IF (owner_del_id IS NOT NULL) THEN
RAISE EXCEPTION 'Data Set (Code: %) cannot be connected to an Experiment (Code: %) %.',
NEW.code, owner_code, deletion_description(owner_del_id);
END IF;
RETURN NEW;
END;
$$;
CREATE FUNCTION check_created_or_modified_sample_owner_is_alive() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
owner_code CODE;
owner_del_id TECH_ID;
BEGIN
IF (NEW.del_id IS NOT NULL) THEN
RETURN NEW;
END IF;
-- check experiment (can't be deleted)
IF (NEW.expe_id IS NOT NULL) THEN
SELECT del_id, code INTO owner_del_id, owner_code
FROM experiments
WHERE id = NEW.expe_id;
IF (owner_del_id IS NOT NULL) THEN
RAISE EXCEPTION 'Sample (Code: %) cannot be connected to an Experiment (Code: %) %.',
NEW.code, owner_code, deletion_description(owner_del_id);
END IF;
END IF;
RETURN NEW;
END;
$$;
CREATE FUNCTION check_deletion_consistency_on_experiment_deletion() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
counter INTEGER;
BEGIN
IF (OLD.del_id IS NOT NULL OR NEW.del_id IS NULL) THEN
RETURN NEW;
END IF;
-- check datasets
SELECT count(*) INTO counter
FROM data
WHERE data.expe_id = NEW.id AND data.del_id IS NULL;
IF (counter > 0) THEN
RAISE EXCEPTION 'Experiment (Code: %) deletion failed because at least one of its data sets was not deleted.', NEW.code;
END IF;
-- check samples
SELECT count(*) INTO counter
FROM samples
WHERE samples.expe_id = NEW.id AND samples.del_id IS NULL;
IF (counter > 0) THEN
RAISE EXCEPTION 'Experiment (Code: %) deletion failed because at least one of its samples was not deleted.', NEW.code;
END IF;
RETURN NEW;
END;
$$;
CREATE FUNCTION check_deletion_consistency_on_sample_deletion() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
counter INTEGER;
BEGIN
IF (OLD.del_id IS NOT NULL OR NEW.del_id IS NULL) THEN
RETURN NEW;
END IF;
-- all directly connected data sets need to be deleted
-- check datasets
SELECT count(*) INTO counter
FROM data
WHERE data.samp_id = NEW.id AND data.del_id IS NULL;
IF (counter > 0) THEN
RAISE EXCEPTION 'Sample (Code: %) deletion failed because at least one of its data sets was not deleted.', NEW.code;
END IF;
-- all components need to be deleted
SELECT count(*) INTO counter
FROM samples
WHERE samples.samp_id_part_of = NEW.id AND samples.del_id IS NULL;
IF (counter > 0) THEN
RAISE EXCEPTION 'Sample (Code: %) deletion failed because at least one of its component samples was not deleted.', NEW.code;
END IF;
-- all children need to be deleted
SELECT count(*) INTO counter
FROM sample_relationships sr, samples sc
WHERE sample_id_parent = NEW.id AND sc.id = sr.sample_id_child AND sc.del_id IS NULL;
IF (counter > 0) THEN
RAISE EXCEPTION 'Sample (Code: %) deletion failed because at least one of its child samples was not deleted.', NEW.code;
END IF;
RETURN NEW;
END;
$$;
CREATE FUNCTION controlled_vocabulary_check() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
v_code CODE;
BEGIN
select code into v_code from data_types where id = NEW.daty_id;
-- Check if the data is of type "CONTROLLEDVOCABULARY"
if v_code = 'CONTROLLEDVOCABULARY' then
if NEW.covo_id IS NULL then
RAISE EXCEPTION 'Insert/Update of Property Type (Code: %) failed, as its Data Type is CONTROLLEDVOCABULARY, but it is not linked to a Controlled Vocabulary.', NEW.code;
end if;
end if;
RETURN NEW;
END;
$$;
CREATE FUNCTION data_set_property_with_material_data_type_check() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
v_type_id CODE;
v_type_id_prop CODE;
BEGIN
if NEW.mate_prop_id IS NOT NULL then
-- find material type id of the property type
select pt.maty_prop_id into v_type_id_prop
from data_set_type_property_types dstpt, property_types pt
where NEW.dstpt_id = dstpt.id AND dstpt.prty_id = pt.id;
if v_type_id_prop IS NOT NULL then
-- find material type id of the material which consists the entity's property value
select entity.maty_id into v_type_id
from materials entity
where NEW.mate_prop_id = entity.id;
if v_type_id != v_type_id_prop then
RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).',
NEW.mate_prop_id, v_type_id, v_type_id_prop;
end if;
end if;
end if;
RETURN NEW;
END;
$$;
CREATE FUNCTION deletion_description(del_id tech_id) RETURNS character varying
LANGUAGE plpgsql
AS $$
DECLARE
del_person VARCHAR;
del_date VARCHAR;
del_reason VARCHAR;
BEGIN
SELECT p.last_name || ' ' || p.first_name || ' (' || p.email || ')',
to_char(d.registration_timestamp, 'YYYY-MM-DD HH:MM:SS'), d.reason
INTO del_person, del_date, del_reason FROM deletions d, persons p
WHERE d.pers_id_registerer = p.id AND d.id = del_id;
RETURN 'deleted by ' || del_person || ' on ' || del_date || ' with reason: "' || del_reason || '"';
END;
$$;
CREATE FUNCTION experiment_property_with_material_data_type_check() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
v_type_id CODE;
v_type_id_prop CODE;
BEGIN
if NEW.mate_prop_id IS NOT NULL then
-- find material type id of the property type
select pt.maty_prop_id into v_type_id_prop
from experiment_type_property_types etpt, property_types pt
where NEW.etpt_id = etpt.id AND etpt.prty_id = pt.id;
if v_type_id_prop IS NOT NULL then
-- find material type id of the material which consists the entity's property value
select entity.maty_id into v_type_id
from materials entity
where NEW.mate_prop_id = entity.id;
if v_type_id != v_type_id_prop then
RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).',
NEW.mate_prop_id, v_type_id, v_type_id_prop;
end if;
end if;
end if;
RETURN NEW;
END;
$$;
CREATE FUNCTION external_data_storage_format_check() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
v_covo_code CODE;
data_code CODE;
BEGIN
select code into v_covo_code from controlled_vocabularies
where is_internal_namespace = true and
id = (select covo_id from controlled_vocabulary_terms where id = NEW.cvte_id_stor_fmt);
-- Check if the data storage format is a term of the controlled vocabulary "STORAGE_FORMAT"
if v_covo_code != 'STORAGE_FORMAT' then
select code into data_code from data_all where id = NEW.data_id;
RAISE EXCEPTION 'Insert/Update of Data (Code: %) failed, as its Storage Format is %, but is required to be STORAGE_FORMAT.', data_code, v_covo_code;
end if;
RETURN NEW;
END;
$$;
CREATE FUNCTION material_property_with_material_data_type_check() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
v_type_id CODE;
v_type_id_prop CODE;
BEGIN
if NEW.mate_prop_id IS NOT NULL then
-- find material type id of the property type
select pt.maty_prop_id into v_type_id_prop
from material_type_property_types etpt, property_types pt
where NEW.mtpt_id = etpt.id AND etpt.prty_id = pt.id;
if v_type_id_prop IS NOT NULL then
-- find material type id of the material which consists the entity's property value
select entity.maty_id into v_type_id
from materials entity
where NEW.mate_prop_id = entity.id;
if v_type_id != v_type_id_prop then
RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).',
NEW.mate_prop_id, v_type_id, v_type_id_prop;
end if;
end if;
end if;
RETURN NEW;
END;
$$;
CREATE FUNCTION rename_sequence(old_name character varying, new_name character varying) RETURNS integer
LANGUAGE plpgsql
AS $$
DECLARE
CURR_SEQ_VAL INTEGER;
BEGIN
SELECT INTO CURR_SEQ_VAL NEXTVAL(OLD_NAME);
EXECUTE 'CREATE SEQUENCE ' || NEW_NAME || ' START WITH ' || CURR_SEQ_VAL;
EXECUTE 'DROP SEQUENCE ' || OLD_NAME;
RETURN CURR_SEQ_VAL;
END;
$$;
CREATE FUNCTION sample_code_uniqueness_check() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
counter INTEGER;
BEGIN
LOCK TABLE samples_all IN EXCLUSIVE MODE;
IF (NEW.samp_id_part_of is NULL) THEN
IF (NEW.dbin_id is not NULL) THEN
SELECT count(*) into counter FROM samples_all
where id != NEW.id and code = NEW.code and samp_id_part_of is NULL and dbin_id = NEW.dbin_id;
IF (counter > 0) THEN
RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because database instance sample with the same code already exists.', NEW.code;
END IF;
ELSIF (NEW.space_id is not NULL) THEN
SELECT count(*) into counter FROM samples_all
where id != NEW.id and code = NEW.code and samp_id_part_of is NULL and space_id = NEW.space_id;
IF (counter > 0) THEN
RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because space sample with the same code already exists.', NEW.code;
END IF;
END IF;
ELSE
IF (NEW.dbin_id is not NULL) THEN
SELECT count(*) into counter FROM samples_all
where id != NEW.id and code = NEW.code and samp_id_part_of = NEW.samp_id_part_of and dbin_id = NEW.dbin_id;
IF (counter > 0) THEN
RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because database instance sample with the same code and being the part of the same container already exists.', NEW.code;
END IF;
ELSIF (NEW.space_id is not NULL) THEN
SELECT count(*) into counter FROM samples_all
where id != NEW.id and code = NEW.code and samp_id_part_of = NEW.samp_id_part_of and space_id = NEW.space_id;
IF (counter > 0) THEN
RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because space sample with the same code and being the part of the same container already exists.', NEW.code;
END IF;
END IF;
END IF;
RETURN NEW;
END;
$$;
CREATE FUNCTION sample_property_with_material_data_type_check() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
v_type_id CODE;
v_type_id_prop CODE;
BEGIN
if NEW.mate_prop_id IS NOT NULL then
-- find material type id of the property type
select pt.maty_prop_id into v_type_id_prop
from sample_type_property_types etpt, property_types pt
where NEW.stpt_id = etpt.id AND etpt.prty_id = pt.id;
if v_type_id_prop IS NOT NULL then
-- find material type id of the material which consists the entity's property value
select entity.maty_id into v_type_id
from materials entity
where NEW.mate_prop_id = entity.id;
if v_type_id != v_type_id_prop then
RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).',
NEW.mate_prop_id, v_type_id, v_type_id_prop;
end if;
end if;
end if;
RETURN NEW;
END;
$$;
CREATE FUNCTION sample_subcode_uniqueness_check() RETURNS trigger
LANGUAGE plpgsql
AS $$
DECLARE
counter INTEGER;
unique_subcode BOOLEAN_CHAR;
BEGIN
LOCK TABLE samples_all IN EXCLUSIVE MODE;
SELECT is_subcode_unique into unique_subcode FROM sample_types WHERE id = NEW.saty_id;
IF (unique_subcode) THEN
IF (NEW.dbin_id is not NULL) THEN
SELECT count(*) into counter FROM samples_all
where id != NEW.id and code = NEW.code and saty_id = NEW.saty_id and dbin_id = NEW.dbin_id;
IF (counter > 0) THEN
RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because database instance sample of the same type with the same subcode already exists.', NEW.code;
END IF;
ELSIF (NEW.space_id is not NULL) THEN
SELECT count(*) into counter FROM samples_all
where id != NEW.id and code = NEW.code and saty_id = NEW.saty_id and space_id = NEW.space_id;
IF (counter > 0) THEN
RAISE EXCEPTION 'Insert/Update of Sample (Code: %) failed because space sample of the same type with the same subcode already exists.', NEW.code;
END IF;
END IF;
END IF;
RETURN NEW;
END;
$$;
CREATE SEQUENCE attachment_content_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('attachment_content_id_seq', 8, true);
SET default_tablespace = '';
SET default_with_oids = false;
CREATE TABLE attachment_contents (
id tech_id NOT NULL,
value file NOT NULL
);
CREATE SEQUENCE attachment_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('attachment_id_seq', 8, true);
CREATE TABLE attachments (
id tech_id NOT NULL,
expe_id tech_id,
file_name file_name NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
version integer NOT NULL,
pers_id_registerer tech_id NOT NULL,
exac_id tech_id NOT NULL,
samp_id tech_id,
proj_id tech_id,
title title_100,
description description_2000,
CONSTRAINT atta_arc_ck CHECK ((((((expe_id IS NOT NULL) AND (proj_id IS NULL)) AND (samp_id IS NULL)) OR (((expe_id IS NULL) AND (proj_id IS NOT NULL)) AND (samp_id IS NULL))) OR (((expe_id IS NULL) AND (proj_id IS NULL)) AND (samp_id IS NOT NULL))))
);
CREATE SEQUENCE authorization_group_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('authorization_group_id_seq', 1, false);
CREATE TABLE authorization_group_persons (
ag_id tech_id NOT NULL,
pers_id tech_id NOT NULL
);
CREATE TABLE authorization_groups (
id tech_id NOT NULL,
dbin_id tech_id NOT NULL,
code code NOT NULL,
description description_2000,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
pers_id_registerer tech_id NOT NULL,
modification_timestamp time_stamp DEFAULT now()
);
CREATE SEQUENCE code_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('code_seq', 1, false);
CREATE TABLE controlled_vocabularies (
id tech_id NOT NULL,
code code NOT NULL,
description description_2000,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
pers_id_registerer tech_id NOT NULL,
is_managed_internally boolean_char DEFAULT false NOT NULL,
is_internal_namespace boolean_char DEFAULT false NOT NULL,
dbin_id tech_id NOT NULL,
modification_timestamp time_stamp DEFAULT now(),
is_chosen_from_list boolean_char DEFAULT true NOT NULL,
source_uri character varying(250)
);
CREATE SEQUENCE controlled_vocabulary_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('controlled_vocabulary_id_seq', 5, true);
CREATE TABLE controlled_vocabulary_terms (
id tech_id NOT NULL,
code object_name NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
covo_id tech_id NOT NULL,
pers_id_registerer tech_id NOT NULL,
label column_label,
description description_2000,
ordinal ordinal_int NOT NULL,
is_official boolean_char DEFAULT true NOT NULL,
CONSTRAINT cvte_ck CHECK (((ordinal)::bigint > 0))
);
CREATE SEQUENCE core_plugin_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('core_plugin_id_seq', 1, false);
CREATE TABLE core_plugins (
id tech_id NOT NULL,
name character varying(200) NOT NULL,
version integer NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
master_reg_script text_value
);
CREATE SEQUENCE cvte_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('cvte_id_seq', 15, true);
CREATE TABLE data_all (
id tech_id NOT NULL,
code code,
dsty_id tech_id NOT NULL,
data_producer_code code,
production_timestamp time_stamp,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
is_placeholder boolean_char DEFAULT false,
is_valid boolean_char DEFAULT true,
modification_timestamp time_stamp DEFAULT now(),
expe_id tech_id NOT NULL,
dast_id tech_id NOT NULL,
is_derived boolean_char NOT NULL,
samp_id tech_id,
pers_id_registerer tech_id,
ctnr_order integer,
ctnr_id tech_id DEFAULT NULL::bigint,
del_id tech_id
);
CREATE VIEW data AS
SELECT data_all.id, data_all.code, data_all.dsty_id, data_all.dast_id, data_all.expe_id, data_all.data_producer_code, data_all.production_timestamp, data_all.samp_id, data_all.registration_timestamp, data_all.pers_id_registerer, data_all.is_placeholder, data_all.is_valid, data_all.modification_timestamp, data_all.is_derived, data_all.ctnr_order, data_all.ctnr_id, data_all.del_id FROM data_all WHERE (data_all.del_id IS NULL);
CREATE VIEW data_deleted AS
SELECT data_all.id, data_all.code, data_all.dsty_id, data_all.dast_id, data_all.expe_id, data_all.data_producer_code, data_all.production_timestamp, data_all.samp_id, data_all.registration_timestamp, data_all.pers_id_registerer, data_all.is_placeholder, data_all.is_valid, data_all.modification_timestamp, data_all.is_derived, data_all.ctnr_order, data_all.ctnr_id, data_all.del_id FROM data_all WHERE (data_all.del_id IS NOT NULL);
CREATE SEQUENCE data_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('data_id_seq', 18, true);
CREATE TABLE data_set_properties (
id tech_id NOT NULL,
ds_id tech_id NOT NULL,
dstpt_id tech_id NOT NULL,
value text_value,
cvte_id tech_id,
mate_prop_id tech_id,
pers_id_registerer tech_id NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
modification_timestamp time_stamp DEFAULT now(),
pers_id_author tech_id NOT NULL,
CONSTRAINT dspr_ck CHECK ((((((value IS NOT NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NULL)) OR (((value IS NULL) AND (cvte_id IS NOT NULL)) AND (mate_prop_id IS NULL))) OR (((value IS NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NOT NULL))))
);
CREATE TABLE data_set_properties_history (
id tech_id NOT NULL,
ds_id tech_id NOT NULL,
dstpt_id tech_id NOT NULL,
value text_value,
cvte_id tech_id,
mate_prop_id tech_id,
valid_until_timestamp time_stamp DEFAULT now(),
pers_id_author tech_id NOT NULL,
valid_from_timestamp time_stamp NOT NULL,
CONSTRAINT dsprh_ck CHECK ((((((value IS NOT NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NULL)) OR (((value IS NULL) AND (cvte_id IS NOT NULL)) AND (mate_prop_id IS NULL))) OR (((value IS NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NOT NULL))))
);
CREATE SEQUENCE data_set_property_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('data_set_property_id_seq', 20, true);
CREATE SEQUENCE data_set_relationship_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('data_set_relationship_id_seq', 1, false);
CREATE TABLE data_set_relationships_all (
data_id_parent tech_id NOT NULL,
data_id_child tech_id NOT NULL
);
CREATE VIEW data_set_relationships AS
SELECT data_set_relationships_all.data_id_parent, data_set_relationships_all.data_id_child FROM ((data_set_relationships_all JOIN data_all parent ON (((data_set_relationships_all.data_id_parent)::bigint = (parent.id)::bigint))) JOIN data_all child ON (((data_set_relationships_all.data_id_child)::bigint = (child.id)::bigint))) WHERE ((parent.del_id IS NULL) AND (child.del_id IS NULL));
CREATE SEQUENCE data_set_type_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('data_set_type_id_seq', 4, true);
CREATE TABLE data_set_type_property_types (
id tech_id NOT NULL,
dsty_id tech_id NOT NULL,
prty_id tech_id NOT NULL,
is_mandatory boolean_char DEFAULT false NOT NULL,
is_managed_internally boolean_char DEFAULT false NOT NULL,
pers_id_registerer tech_id NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
section description_2000,
ordinal ordinal_int NOT NULL,
script_id tech_id,
is_shown_edit boolean_char DEFAULT true NOT NULL
);
CREATE TABLE data_set_types (
id tech_id NOT NULL,
code code NOT NULL,
description description_2000,
dbin_id tech_id NOT NULL,
modification_timestamp time_stamp DEFAULT now(),
main_ds_pattern character varying(300),
main_ds_path character varying(1000),
is_container boolean_char DEFAULT false
);
CREATE SEQUENCE data_store_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('data_store_id_seq', 1, true);
CREATE TABLE data_store_service_data_set_types (
data_store_service_id tech_id NOT NULL,
data_set_type_id tech_id NOT NULL
);
CREATE TABLE data_store_services (
id tech_id NOT NULL,
key character varying(256) NOT NULL,
label character varying(256) NOT NULL,
kind data_store_service_kind NOT NULL,
data_store_id tech_id NOT NULL,
reporting_plugin_type data_store_service_reporting_plugin_type
);
CREATE SEQUENCE data_store_services_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('data_store_services_id_seq', 1, false);
CREATE TABLE data_stores (
id tech_id NOT NULL,
dbin_id tech_id NOT NULL,
code code NOT NULL,
download_url character varying(1024) NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
remote_url character varying(250) NOT NULL,
session_token character varying(50) NOT NULL,
modification_timestamp time_stamp DEFAULT now(),
is_archiver_configured boolean_char DEFAULT false NOT NULL
);
CREATE SEQUENCE data_type_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('data_type_id_seq', 10, true);
CREATE TABLE data_types (
id tech_id NOT NULL,
code code NOT NULL,
description description_2000 NOT NULL
);
CREATE SEQUENCE database_instance_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('database_instance_id_seq', 1, true);
CREATE TABLE database_instances (
id tech_id NOT NULL,
code code NOT NULL,
uuid code NOT NULL,
is_original_source boolean_char DEFAULT false NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL
);
CREATE TABLE database_version_logs (
db_version character varying(4) NOT NULL,
module_name character varying(250),
run_status character varying(10),
run_status_timestamp timestamp without time zone,
module_code bytea,
run_exception bytea
);
CREATE SEQUENCE deletion_id_seq
START WITH 5
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('deletion_id_seq', 4, true);
CREATE TABLE deletions (
id tech_id NOT NULL,
pers_id_registerer tech_id NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
reason description_2000 NOT NULL
);
CREATE SEQUENCE dstpt_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('dstpt_id_seq', 4, true);
CREATE SEQUENCE etpt_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('etpt_id_seq', 7, true);
CREATE SEQUENCE event_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('event_id_seq', 1, false);
CREATE TABLE events (
id tech_id NOT NULL,
event_type event_type NOT NULL,
description text_value,
reason description_2000,
pers_id_registerer tech_id NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
entity_type character varying(80) NOT NULL,
identifiers text_value NOT NULL,
CONSTRAINT evnt_et_enum_ck CHECK (((entity_type)::text = ANY (ARRAY[('ATTACHMENT'::character varying)::text, ('DATASET'::character varying)::text, ('EXPERIMENT'::character varying)::text, ('SPACE'::character varying)::text, ('MATERIAL'::character varying)::text, ('PROJECT'::character varying)::text, ('PROPERTY_TYPE'::character varying)::text, ('SAMPLE'::character varying)::text, ('VOCABULARY'::character varying)::text, ('AUTHORIZATION_GROUP'::character varying)::text])))
);
CREATE SEQUENCE experiment_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('experiment_id_seq', 22, true);
CREATE TABLE experiment_properties (
id tech_id NOT NULL,
expe_id tech_id NOT NULL,
etpt_id tech_id NOT NULL,
value text_value,
cvte_id tech_id,
pers_id_registerer tech_id NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
modification_timestamp time_stamp DEFAULT now(),
mate_prop_id tech_id,
pers_id_author tech_id NOT NULL,
CONSTRAINT expr_ck CHECK ((((((value IS NOT NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NULL)) OR (((value IS NULL) AND (cvte_id IS NOT NULL)) AND (mate_prop_id IS NULL))) OR (((value IS NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NOT NULL))))
);
CREATE TABLE experiment_properties_history (
id tech_id NOT NULL,
expe_id tech_id NOT NULL,
etpt_id tech_id NOT NULL,
value text_value,
cvte_id tech_id,
mate_prop_id tech_id,
valid_until_timestamp time_stamp DEFAULT now(),
pers_id_author tech_id NOT NULL,
valid_from_timestamp time_stamp NOT NULL,
CONSTRAINT exprh_ck CHECK ((((((value IS NOT NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NULL)) OR (((value IS NULL) AND (cvte_id IS NOT NULL)) AND (mate_prop_id IS NULL))) OR (((value IS NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NOT NULL))))
);
CREATE SEQUENCE experiment_property_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('experiment_property_id_seq', 20, true);
CREATE SEQUENCE experiment_type_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('experiment_type_id_seq', 2, true);
CREATE TABLE experiment_type_property_types (
id tech_id NOT NULL,
exty_id tech_id NOT NULL,
prty_id tech_id NOT NULL,
is_mandatory boolean_char DEFAULT false NOT NULL,
is_managed_internally boolean_char DEFAULT false NOT NULL,
pers_id_registerer tech_id NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
section description_2000,
ordinal ordinal_int NOT NULL,
script_id tech_id,
is_shown_edit boolean_char DEFAULT true NOT NULL
);
CREATE TABLE experiment_types (
id tech_id NOT NULL,
code code NOT NULL,
description description_2000,
dbin_id tech_id NOT NULL,
modification_timestamp time_stamp DEFAULT now()
);
CREATE TABLE experiments_all (
id tech_id NOT NULL,
code code NOT NULL,
exty_id tech_id NOT NULL,
mate_id_study_object tech_id,
pers_id_registerer tech_id NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
proj_id tech_id NOT NULL,
del_id tech_id,
is_public boolean_char DEFAULT false NOT NULL,
modification_timestamp time_stamp DEFAULT now(),
perm_id code NOT NULL
);
CREATE VIEW experiments AS
SELECT experiments_all.id, experiments_all.perm_id, experiments_all.code, experiments_all.exty_id, experiments_all.mate_id_study_object, experiments_all.pers_id_registerer, experiments_all.registration_timestamp, experiments_all.modification_timestamp, experiments_all.proj_id, experiments_all.del_id, experiments_all.is_public FROM experiments_all WHERE (experiments_all.del_id IS NULL);
CREATE VIEW experiments_deleted AS
SELECT experiments_all.id, experiments_all.perm_id, experiments_all.code, experiments_all.exty_id, experiments_all.mate_id_study_object, experiments_all.pers_id_registerer, experiments_all.registration_timestamp, experiments_all.modification_timestamp, experiments_all.proj_id, experiments_all.del_id, experiments_all.is_public FROM experiments_all WHERE (experiments_all.del_id IS NOT NULL);
CREATE TABLE external_data (
data_id tech_id NOT NULL,
location character varying(1024) NOT NULL,
ffty_id tech_id NOT NULL,
loty_id tech_id NOT NULL,
cvte_id_stor_fmt tech_id NOT NULL,
is_complete boolean_char_or_unknown DEFAULT 'U'::bpchar NOT NULL,
cvte_id_store tech_id,
status archiving_status DEFAULT 'AVAILABLE'::character varying NOT NULL,
share_id code,
size ordinal_int,
present_in_archive boolean_char DEFAULT false,
speed_hint integer DEFAULT (-50) NOT NULL
);
CREATE SEQUENCE file_format_type_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('file_format_type_id_seq', 8, true);
CREATE TABLE file_format_types (
id tech_id NOT NULL,
code code NOT NULL,
description description_2000,
dbin_id tech_id NOT NULL
);
CREATE SEQUENCE filter_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('filter_id_seq', 1, false);
CREATE TABLE filters (
id tech_id NOT NULL,
dbin_id tech_id NOT NULL,
name character varying(200) NOT NULL,
description description_2000,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
pers_id_registerer tech_id NOT NULL,
modification_timestamp time_stamp DEFAULT now(),
expression text NOT NULL,
is_public boolean NOT NULL,
grid_id character varying(200) NOT NULL
);
CREATE TABLE grid_custom_columns (
id tech_id NOT NULL,
dbin_id tech_id NOT NULL,
code character varying(200) NOT NULL,
label column_label NOT NULL,
description description_2000,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
pers_id_registerer tech_id NOT NULL,
modification_timestamp time_stamp DEFAULT now(),
expression grid_expression NOT NULL,
is_public boolean NOT NULL,
grid_id grid_id NOT NULL
);
CREATE SEQUENCE grid_custom_columns_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('grid_custom_columns_id_seq', 1, false);
CREATE SEQUENCE locator_type_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('locator_type_id_seq', 1, true);
CREATE TABLE locator_types (
id tech_id NOT NULL,
code code NOT NULL,
description description_2000
);
CREATE SEQUENCE material_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('material_id_seq', 3734, true);
CREATE TABLE material_properties (
id tech_id NOT NULL,
mate_id tech_id NOT NULL,
mtpt_id tech_id NOT NULL,
value text_value,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
pers_id_registerer tech_id NOT NULL,
cvte_id tech_id,
modification_timestamp time_stamp DEFAULT now(),
mate_prop_id tech_id,
pers_id_author tech_id NOT NULL,
CONSTRAINT mapr_ck CHECK ((((((value IS NOT NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NULL)) OR (((value IS NULL) AND (cvte_id IS NOT NULL)) AND (mate_prop_id IS NULL))) OR (((value IS NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NOT NULL))))
);
CREATE TABLE material_properties_history (
id tech_id NOT NULL,
mate_id tech_id NOT NULL,
mtpt_id tech_id NOT NULL,
value text_value,
cvte_id tech_id,
mate_prop_id tech_id,
valid_until_timestamp time_stamp DEFAULT now(),
pers_id_author tech_id NOT NULL,
valid_from_timestamp time_stamp NOT NULL,
CONSTRAINT maprh_ck CHECK ((((((value IS NOT NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NULL)) OR (((value IS NULL) AND (cvte_id IS NOT NULL)) AND (mate_prop_id IS NULL))) OR (((value IS NULL) AND (cvte_id IS NULL)) AND (mate_prop_id IS NOT NULL))))
);
CREATE SEQUENCE material_property_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('material_property_id_seq', 9321, true);
CREATE SEQUENCE material_type_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('material_type_id_seq', 7, true);
CREATE TABLE material_type_property_types (
id tech_id NOT NULL,
maty_id tech_id NOT NULL,
prty_id tech_id NOT NULL,
is_mandatory boolean_char DEFAULT false NOT NULL,
is_managed_internally boolean_char DEFAULT false NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
pers_id_registerer tech_id NOT NULL,
section description_2000,
ordinal ordinal_int NOT NULL,
script_id tech_id,
is_shown_edit boolean_char DEFAULT true NOT NULL
);
CREATE TABLE material_types (
id tech_id NOT NULL,
code code NOT NULL,
description description_2000,
dbin_id tech_id NOT NULL,
modification_timestamp time_stamp DEFAULT now()
);
CREATE TABLE materials (
id tech_id NOT NULL,
code code NOT NULL,
maty_id tech_id NOT NULL,
pers_id_registerer tech_id NOT NULL,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
dbin_id tech_id NOT NULL,
modification_timestamp time_stamp DEFAULT now()
);
CREATE SEQUENCE mtpt_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('mtpt_id_seq', 22, true);
CREATE SEQUENCE perm_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('perm_id_seq', 1035, true);
CREATE SEQUENCE person_id_seq
START WITH 1
INCREMENT BY 1
NO MINVALUE
NO MAXVALUE
CACHE 1;
SELECT pg_catalog.setval('person_id_seq', 4, true);
CREATE TABLE persons (
id tech_id NOT NULL,
first_name character varying(30),
last_name character varying(30),
user_id user_id NOT NULL,
email object_name,
dbin_id tech_id NOT NULL,
space_id tech_id,
registration_timestamp time_stamp_dfl DEFAULT now() NOT NULL,
pers_id_registerer tech_id,
display_settings file