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UniversitätSpital Zürich pipeline (Phil Cheng & Mitch Levesque)

Material for the containers & pipelines tutorials

PyBIS is a Python3 module to interact with openBIS. This repository contains various Jupyter notebooks that demonstrate the usage of the Python pyBIS module.

This repository contains the components necessary to integrate a JupyterHub installation with openBIS.

The code has been moved to the main openBIS repository. This repository is no longer updated!!!

Demo of Jupyter notebook for ETH ARDM workshops

Code used to generate results for the publication "Accurate and predictive antibody repertoire profiling by molecular amplification fingerprinting"

This project aims to collect (and possibly implement) ideas how the Renku platform (for analysis workflow and collaboration) and openBIS (data store and management) can be optimised for better interoperability.