<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2 Final//EN"> <HTML> <HEAD> </HEAD> <BODY> <H3>Start servers</H3> The installation has completed successfully. To start openBIS launch the following script: <DIV style="background-color: #EEEEEE; fontfamily: monospace; padding-top: 10px; padding-bottom: 10px; margin: 15px 0px 15px 0px;"> ${INSTALL_BIN_PATH}/allup.sh </DIV> After the completion of the above command openBIS will be available at <A href="https://localhost:8443/openbis">https://localhost:8443/openbis</A> <BR> <H3>Importing test data</H3> <P> By now you have a fully functional openBIS instance, but it makes little sense if it has no data in it. </P> <h4>Proteomics</h4> <p> Here are the steps to get an example prot.XML into openBIS. <OL> <LI>Login into <A href="https://localhost:8443/openbis">openBIS</A> as 'admin'. <LI>Open space browser by clicking on menu item <it>Admin -> Spaces</it>. <LI>Create a space named TEST by using <it>Add Space</it> button. <LI>Create a project named PROT inside space TEST by using menu item <it>New -> Project</it>. <LI>At the console execute the command: <DIV style="background-color: #EEEEEE; fontfamily: monospace; padding-top: 10px; padding-bottom: 10px; margin: 15px 0px 15px 0px;"> cp -R ${DSS_ROOT_DIR}/examples/test+prot ${DSS_ROOT_DIR}/incoming-ms-search </DIV> </OL> It will create an experiment in project /TEST/PROT which shows a list of proteins. We challenge you to go find it in the running application ! </P> <h4>Screening</h4> You could import a minimalistic example by executing the command: <DIV style="background-color: #EEEEEE; fontfamily: monospace; padding-top: 10px; padding-bottom: 10px; margin: 15px 0px 15px 0px;"> cp -R ${DSS_ROOT_DIR}/examples/PLATE1 ${DSS_ROOT_DIR}/incoming-hcs </DIV> It will create a plate <i>PLATE1</i> with images data for one of its wells. We challenge you to go find it in the running application !<p> <BR> <H3>Customizing openBIS</H3> In the scientific world there is no one-size-fits-them-all solutions. Your research data is certainly different from our example data. Luckily, openBIS provides an easy way to script the import process - the Jython Dropboxes. You can learn how to create your custom-tailored Jython Dropbox <A HREF="https://wiki-bsse.ethz.ch/display/openBISDoc/JythonTopLevelDataSetHandler">here</A>. </BODY> </HTML>