From fd849b5beee0cc357dad1be90a140e20c36d2950 Mon Sep 17 00:00:00 2001
From: tpylak <tpylak>
Date: Wed, 3 Aug 2011 21:48:05 +0000
Subject: [PATCH] minor: API test program
SVN: 22334
---
.../v1/LoadImagesScreeningClientApiTest.java | 28 +++++++++++++++----
1 file changed, 23 insertions(+), 5 deletions(-)
diff --git a/screening/source/java/ch/systemsx/cisd/openbis/plugin/screening/client/api/v1/LoadImagesScreeningClientApiTest.java b/screening/source/java/ch/systemsx/cisd/openbis/plugin/screening/client/api/v1/LoadImagesScreeningClientApiTest.java
index ead8ac592a5..45f97189138 100644
--- a/screening/source/java/ch/systemsx/cisd/openbis/plugin/screening/client/api/v1/LoadImagesScreeningClientApiTest.java
+++ b/screening/source/java/ch/systemsx/cisd/openbis/plugin/screening/client/api/v1/LoadImagesScreeningClientApiTest.java
@@ -29,6 +29,7 @@ import java.util.Properties;
import org.apache.log4j.PropertyConfigurator;
import ch.systemsx.cisd.openbis.plugin.screening.client.api.v1.ScreeningOpenbisServiceFacade.IImageOutputStreamProvider;
+import ch.systemsx.cisd.openbis.plugin.screening.shared.api.v1.dto.ImageDatasetMetadata;
import ch.systemsx.cisd.openbis.plugin.screening.shared.api.v1.dto.ImageDatasetReference;
import ch.systemsx.cisd.openbis.plugin.screening.shared.api.v1.dto.PlateIdentifier;
import ch.systemsx.cisd.openbis.plugin.screening.shared.api.v1.dto.PlateImageReference;
@@ -69,7 +70,8 @@ public class LoadImagesScreeningClientApiTest
// Another way: PlateIdentifier.createFromAugmentedCode("/SPACE_CODE/MY_PLATE_CODE")
// PlateIdentifier plate = new PlateIdentifier("MY_PLATE_CODE", "SPACE_CODE", null);
- PlateIdentifier plate = new PlateIdentifier("PLATE-2-A", "TEST", null);
+ String plateCode = "PLATE2"; // "PLATE-2-A";
+ PlateIdentifier plate = new PlateIdentifier(plateCode, "TEST", null);
List<ImageDatasetReference> imageDatasets =
facade.listRawImageDatasets(Arrays.asList(plate));
if (imageDatasets.size() == 0)
@@ -77,8 +79,26 @@ public class LoadImagesScreeningClientApiTest
System.err.println("No image datasets connected to plate " + plate);
System.exit(1);
}
- // take the first image dataset
- ImageDatasetReference imageDataset = imageDatasets.get(0);
+
+ printImagesMetadata(facade, imageDatasets);
+ loadOneImage(facade, imageDatasets.get(0));
+
+ facade.logout();
+ }
+
+ private static void printImagesMetadata(IScreeningOpenbisServiceFacade facade,
+ List<ImageDatasetReference> imageDatasets)
+ {
+ List<ImageDatasetMetadata> imageMetadatas = facade.listImageMetadata(imageDatasets);
+ for (ImageDatasetMetadata imageMetadata : imageMetadatas)
+ {
+ System.out.println(imageMetadata);
+ }
+ }
+
+ private static void loadOneImage(IScreeningOpenbisServiceFacade facade,
+ ImageDatasetReference imageDataset) throws IOException
+ {
// You could get to know more about the image dataset metadata with:
// facade.listImageMetadata(imageDataset);
// Here we will make some assumptions.
@@ -92,8 +112,6 @@ public class LoadImagesScreeningClientApiTest
WellPosition well = new WellPosition(row, column);
PlateImageReference imageRef = new PlateImageReference(tile, channel, well, imageDataset);
loadImage(facade, imageRef);
-
- facade.logout();
}
private static File createImageFile(PlateImageReference imageRef)
--
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