From f238075d3d1d78e28f6e69bb8cac6b3bd359d623 Mon Sep 17 00:00:00 2001
From: kohleman <kohleman>
Date: Tue, 3 Nov 2009 13:58:02 +0000
Subject: [PATCH] changed 'Number of tiles' to a parameter Background: with RTA
1.5 and the new kits there will be 120 tiles per lane
SVN: 13198
---
deep_sequencing_unit/source/bash/cif2txt.sh | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/deep_sequencing_unit/source/bash/cif2txt.sh b/deep_sequencing_unit/source/bash/cif2txt.sh
index b2638362357..c9c114c7d5f 100755
--- a/deep_sequencing_unit/source/bash/cif2txt.sh
+++ b/deep_sequencing_unit/source/bash/cif2txt.sh
@@ -23,10 +23,9 @@ INTENSITY_FOLDER=$1
CYCLES=$2
NUMBER_OF_TILES=$3
NUMBER_OF_LANES=8
-NUMBER_OF_TILES=120
#INT_NSE_DIR=$1/int_nse
PRG=`basename $0`
-USAGE="Usage: ${PRG} <Path_to_Intensity_Folder> <Number_of_Cycles> \n\nEXAMPLE: ${PRG} /array0/Runs/090720_42HUDAAXX/Data/Intensities/ 38 120"
+USAGE="Usage: ${PRG} <Path_to_Intensity_Folder> <Number_of_Cycles> <Number_of_Tiles>\n\nEXAMPLE: ${PRG} /array0/Runs/090720_42HUDAAXX/Data/Intensities/ 38 120"
if [ -z "${INTENSITY_FOLDER}" -o -z "${CYCLES}" -o -z "${NUMBER_OF_TILES}" ]
then
@@ -48,4 +47,5 @@ for (( t = 1; t <= $NUMBER_OF_TILES; t++ )); do
done
# wait for the processes to end after calling 8 Lanes
wait $!
+ sleep 3
done
\ No newline at end of file
--
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