From d9d61a1cc443d6ab84feff87786f8de201991e37 Mon Sep 17 00:00:00 2001
From: vermeul <swen@ethz.ch>
Date: Mon, 26 Jul 2021 15:59:56 +0200
Subject: [PATCH] add black format
---
pybis/src/python/pybis/definitions.py | 350 +++++++++++++-------------
1 file changed, 169 insertions(+), 181 deletions(-)
diff --git a/pybis/src/python/pybis/definitions.py b/pybis/src/python/pybis/definitions.py
index a83646fb230..889439e2377 100644
--- a/pybis/src/python/pybis/definitions.py
+++ b/pybis/src/python/pybis/definitions.py
@@ -14,10 +14,10 @@ def openbis_definitions(entity):
"attrs": "code permId description frozen frozenForProjects frozenForSamples registrator registrationDate modificationDate".split(),
"multi": "".split(),
"identifier": "spaceId",
- "create": { "@type": "as.dto.space.create.SpaceCreation"},
- "update": { "@type": "as.dto.space.update.SpaceUpdate"},
- "delete": { "@type": "as.dto.space.delete.SpaceDeletionOptions"},
- "fetch": { "@type": "as.dto.space.fetchoptions.SpaceFetchOptions"},
+ "create": {"@type": "as.dto.space.create.SpaceCreation"},
+ "update": {"@type": "as.dto.space.update.SpaceUpdate"},
+ "delete": {"@type": "as.dto.space.delete.SpaceDeletionOptions"},
+ "fetch": {"@type": "as.dto.space.fetchoptions.SpaceFetchOptions"},
},
"project": {
"attrs_new": "code description space attachments".split(),
@@ -25,8 +25,8 @@ def openbis_definitions(entity):
"attrs": "code description permId identifier space leader registrator registrationDate modifier modificationDate attachments frozen frozenForExperiments frozenForSamples".split(),
"multi": "".split(),
"identifier": "projectId",
- "create": { "@type": "as.dto.project.create.ProjectCreation"},
- "update": { "@type": "as.dto.project.update.ProjectUpdate"},
+ "create": {"@type": "as.dto.project.create.ProjectCreation"},
+ "update": {"@type": "as.dto.project.update.ProjectUpdate"},
},
"experiment": {
"attrs_new": "code type project tags attachments".split(),
@@ -34,30 +34,30 @@ def openbis_definitions(entity):
"attrs": "code permId identifier type project tags registrator registrationDate modifier modificationDate attachments frozen frozenForDataSets frozenForSamples".split(),
"multi": "tags attachments".split(),
"identifier": "experimentId",
- "create": { "@type": "as.dto.experiment.create.ExperimentCreation"},
- "update": { "@type": "as.dto.experiment.update.ExperimentUpdate"},
+ "create": {"@type": "as.dto.experiment.create.ExperimentCreation"},
+ "update": {"@type": "as.dto.experiment.update.ExperimentUpdate"},
},
"externalDms": {
"attrs_new": "code label address addressType creationId".split(),
"attrs_up": "label address".split(),
"attrs": "code permId label address addressType urlTemplate".split(),
"identifier": "externalDmsId",
- "create": { "@type": "as.dto.externaldms.create.ExternalDmsCreation"},
- "update": { "@type": "as.dto.externaldms.update.ExternalDmsUpdate"},
+ "create": {"@type": "as.dto.externaldms.create.ExternalDmsCreation"},
+ "update": {"@type": "as.dto.externaldms.update.ExternalDmsUpdate"},
},
"sample": {
"attrs_new": "code type project parents children container components space experiment tags attachments".split(),
"attrs_up": "project parents children container components space experiment tags attachments freeze freezeForComponents freezeForChildren freezeForParents freezeForDataSets".split(),
"attrs": "code permId identifier type project parents children components space experiment tags registrator registrationDate modifier modificationDate attachments container frozen frozenForComponents frozenForChildren frozenForParents frozenForDataSets".split(),
"ids2type": {
- 'parentIds': {'permId': {'@type': 'as.dto.sample.id.SamplePermId'}},
- 'childIds': {'permId': {'@type': 'as.dto.sample.id.SamplePermId'}},
- 'componentIds': {'permId': {'@type': 'as.dto.sample.id.SamplePermId'}},
+ "parentIds": {"permId": {"@type": "as.dto.sample.id.SamplePermId"}},
+ "childIds": {"permId": {"@type": "as.dto.sample.id.SamplePermId"}},
+ "componentIds": {"permId": {"@type": "as.dto.sample.id.SamplePermId"}},
},
"identifier": "sampleId",
- "create": { "@type": "as.dto.sample.create.SampleCreation"},
- "update": { "@type": "as.dto.sample.update.SampleUpdate"},
- "delete": { "@type": "as.dto.sample.delete.SampleDeletionOptions"},
+ "create": {"@type": "as.dto.sample.create.SampleCreation"},
+ "update": {"@type": "as.dto.sample.update.SampleUpdate"},
+ "delete": {"@type": "as.dto.sample.delete.SampleDeletionOptions"},
"cre_type": "as.dto.sample.create.SampleCreation",
"multi": "parents children components tags attachments".split(),
},
@@ -66,112 +66,79 @@ def openbis_definitions(entity):
"attrs_up": "description autoGeneratedCode generatedCodePrefix subcodeUnique listable showContainer showParents showParentMetadata, validationPlugin".split(),
"attrs": "permId code description autoGeneratedCode generatedCodePrefix subcodeUnique listable showContainer showParents showParentMetadata modificationDate validationPlugin".split(),
"default_attribute_values": {
- "autoGeneratedCode" : False,
- "generatedCodePrefix" : "S",
- "subcodeUnique" : False,
- "description" : "",
- "listable" : True,
- "showContainer" : False,
- "showParents" : True,
- "showParentMetadata" : False
- },
- "search": {
- "@type": "as.dto.sample.search.SampleTypeSearchCriteria"
- },
- "create": {
- "@type": "as.dto.sample.create.SampleTypeCreation"
- },
- "update": {
- "@type": "as.dto.sample.update.SampleTypeUpdate"
- },
- "delete": {
- "@type": "as.dto.sample.delete.SampleTypeDeletionOptions"
+ "autoGeneratedCode": False,
+ "generatedCodePrefix": "S",
+ "subcodeUnique": False,
+ "description": "",
+ "listable": True,
+ "showContainer": False,
+ "showParents": True,
+ "showParentMetadata": False,
},
+ "search": {"@type": "as.dto.sample.search.SampleTypeSearchCriteria"},
+ "create": {"@type": "as.dto.sample.create.SampleTypeCreation"},
+ "update": {"@type": "as.dto.sample.update.SampleTypeUpdate"},
+ "delete": {"@type": "as.dto.sample.delete.SampleTypeDeletionOptions"},
"identifier": "typeId",
},
"materialType": {
- "attrs_new": "code description validationPlugin".split(),
- "attrs_up": "description validationPlugin".split(),
+ "attrs_new": "code description validationPlugin".split(),
+ "attrs_up": "description validationPlugin".split(),
"attrs": "permId code description validationPlugin".split(),
- "search": {
- "@type": "as.dto.material.search.MaterialTypeSearchCriteria"
- },
- "fetch": {
- "@type": "as.dto.material.fetchoptions.MaterialTypeFetchOptions"
- },
- "create": {
- "@type": "as.dto.material.create.MaterialTypeCreation"
- },
- "update": {
- "@type": "as.dto.material.update.MaterialTypeUpdate"
- },
- "delete": {
- "@type": "as.dto.material.delete.MaterialTypeDeletionOptions"
- },
+ "search": {"@type": "as.dto.material.search.MaterialTypeSearchCriteria"},
+ "fetch": {"@type": "as.dto.material.fetchoptions.MaterialTypeFetchOptions"},
+ "create": {"@type": "as.dto.material.create.MaterialTypeCreation"},
+ "update": {"@type": "as.dto.material.update.MaterialTypeUpdate"},
+ "delete": {"@type": "as.dto.material.delete.MaterialTypeDeletionOptions"},
"identifier": "typeId",
},
"dataSetType": {
- "attrs_new": "code description mainDataSetPattern mainDataSetPath disallowDeletion validationPlugin".split(),
- "attrs_up": "description mainDataSetPattern mainDataSetPath disallowDeletion validationPlugin".split(),
+ "attrs_new": "code description mainDataSetPattern mainDataSetPath disallowDeletion validationPlugin".split(),
+ "attrs_up": "description mainDataSetPattern mainDataSetPath disallowDeletion validationPlugin".split(),
"attrs": "permId code description mainDataSetPattern mainDataSetPath disallowDeletion modificationDate validationPlugin".split(),
- "search": {
- "@type": "as.dto.dataset.search.DataSetTypeSearchCriteria"
- },
- "fetch": {
- "@type": "as.dto.dataset.fetchoptions.DataSetTypeFetchOptions"
- },
- "create": {
- "@type": "as.dto.dataset.create.DataSetTypeCreation"
- },
- "update": {
- "@type": "as.dto.dataset.update.DataSetTypeUpdate"
- },
- "delete": {
- "@type": "as.dto.dataset.delete.DataSetTypeDeletionOptions"
- },
+ "search": {"@type": "as.dto.dataset.search.DataSetTypeSearchCriteria"},
+ "fetch": {"@type": "as.dto.dataset.fetchoptions.DataSetTypeFetchOptions"},
+ "create": {"@type": "as.dto.dataset.create.DataSetTypeCreation"},
+ "update": {"@type": "as.dto.dataset.update.DataSetTypeUpdate"},
+ "delete": {"@type": "as.dto.dataset.delete.DataSetTypeDeletionOptions"},
"identifier": "typeId",
},
"experimentType": {
"attrs_new": "code description validationPlugin".split(),
- "attrs_up": "description modificationDate validationPlugin".split(),
- "attrs": "permId code description modificationDate validationPlugin".split(),
+ "attrs_up": "description modificationDate validationPlugin".split(),
+ "attrs": "permId code description modificationDate validationPlugin".split(),
"search": {
"@type": "as.dto.experiment.search.ExperimentTypeSearchCriteria"
},
"fetch": {
"@type": "as.dto.experiment.fetchoptions.ExperimentTypeFetchOptions"
},
- "create": {
- "@type": "as.dto.experiment.create.ExperimentTypeCreation"
- },
- "update": {
- "@type": "as.dto.experiment.update.ExperimentTypeUpdate"
- },
+ "create": {"@type": "as.dto.experiment.create.ExperimentTypeCreation"},
+ "update": {"@type": "as.dto.experiment.update.ExperimentTypeUpdate"},
"delete": {
"@type": "as.dto.experiment.delete.ExperimentTypeDeletionOptions"
},
"identifier": "typeId",
},
"propertyType": {
- "attrs": "code label description managedInternally dataType vocabulary materialType schema transformation semanticAnnotations registrator registrationDate".split(),
+ "attrs": "code permId label description managedInternally dataType vocabulary materialType schema transformation semanticAnnotations registrator registrationDate metaData".split(),
"attrs_new": "code label description managedInternally dataType vocabulary materialType schema transformation metaData".split(),
"attrs_up": "label description schema transformation metaData".split(),
- "search": {
- "@type": "as.dto.property.search.PropertyTypeSearchCriteria"
- },
- "create": {
- "@type": "as.dto.property.create.PropertyTypeCreation"
- },
- "update": {
- "@type": "as.dto.property.update.PropertyTypeUpdate"
- },
- "delete": {
- "@type": "as.dto.property.delete.PropertyTypeDeletionOptions"
- },
+ "search": {"@type": "as.dto.property.search.PropertyTypeSearchCriteria"},
+ "create": {"@type": "as.dto.property.create.PropertyTypeCreation"},
+ "update": {"@type": "as.dto.property.update.PropertyTypeUpdate"},
+ "delete": {"@type": "as.dto.property.delete.PropertyTypeDeletionOptions"},
"dataType": [
- "INTEGER", "VARCHAR", "MULTILINE_VARCHAR",
- "REAL", "TIMESTAMP", "BOOLEAN", "CONTROLLEDVOCABULARY",
- "MATERIAL", "HYPERLINK", "XML"
+ "INTEGER",
+ "VARCHAR",
+ "MULTILINE_VARCHAR",
+ "REAL",
+ "TIMESTAMP",
+ "BOOLEAN",
+ "CONTROLLEDVOCABULARY",
+ "MATERIAL",
+ "HYPERLINK",
+ "XML",
],
"identifier": "typeId",
},
@@ -180,12 +147,8 @@ def openbis_definitions(entity):
"attrs_up": "entityType propertyType predicateOntologyId predicateOntologyVersion predicateAccessionId descriptorOntologyId descriptorOntologyVersion descriptorAccessionId ".split(),
"attrs": "permId entityType propertyType predicateOntologyId predicateOntologyVersion predicateAccessionId descriptorOntologyId descriptorOntologyVersion descriptorAccessionId creationDate".split(),
"ids2type": {
- "propertyTypeId": {
- "permId": "as.dto.property.id.PropertyTypePermId"
- },
- "entityTypeId": {
- "permId": "as.dto.entity.id.EntityTypePermId"
- },
+ "propertyTypeId": {"permId": "as.dto.property.id.PropertyTypePermId"},
+ "entityTypeId": {"permId": "as.dto.entity.id.EntityTypePermId"},
},
"identifier": "permId",
"cre_type": "as.dto.sample.create.SampleCreation",
@@ -195,12 +158,15 @@ def openbis_definitions(entity):
"attrs_new": "type code kind experiment sample parents children components containers tags".split(),
"attrs_up": "parents children experiment sample components containers tags freeze freezeForChildren freezeForParents freezeForComponents freezeForContainers".split(),
"attrs": "code permId type kind experiment sample parents children components containers tags accessDate dataProducer dataProductionDate registrator registrationDate modifier modificationDate dataStore measured postRegistered frozen frozenForChildren frozenForParents frozenForComponents frozenForContainers".split(),
-
"ids2type": {
- 'parentIds': {'permId': {'@type': 'as.dto.dataset.id.DataSetPermId'}},
- 'childIds': {'permId': {'@type': 'as.dto.dataset.id.DataSetPermId'}},
- 'componentIds': {'permId': {'@type': 'as.dto.dataset.id.DataSetPermId'}},
- 'containerIds': {'permId': {'@type': 'as.dto.dataset.id.DataSetPermId'}},
+ "parentIds": {"permId": {"@type": "as.dto.dataset.id.DataSetPermId"}},
+ "childIds": {"permId": {"@type": "as.dto.dataset.id.DataSetPermId"}},
+ "componentIds": {
+ "permId": {"@type": "as.dto.dataset.id.DataSetPermId"}
+ },
+ "containerIds": {
+ "permId": {"@type": "as.dto.dataset.id.DataSetPermId"}
+ },
},
"multi": "parents children containers components".split(),
"identifier": "dataSetId",
@@ -225,11 +191,11 @@ def openbis_definitions(entity):
"attrs": "code description managedInternally chosenFromList urlTemplate registrator registrationDate modifier modificationDate".split(),
"multi": "".split(),
"identifier": "vocabularyId",
- "search": { "@type": "as.dto.vocabulary.search.VocabularySearchCriteria" },
- "create": { "@type": "as.dto.vocabulary.create.VocabularyCreation"},
- "update": { "@type": "as.dto.vocabulary.update.VocabularyUpdate"},
- "delete": { "@type": "as.dto.vocabulary.delete.VocabularyDeletionOptions"},
- "fetch": { "@type": "as.dto.vocabulary.fetchoptions.VocabularyFetchOptions"},
+ "search": {"@type": "as.dto.vocabulary.search.VocabularySearchCriteria"},
+ "create": {"@type": "as.dto.vocabulary.create.VocabularyCreation"},
+ "update": {"@type": "as.dto.vocabulary.update.VocabularyUpdate"},
+ "delete": {"@type": "as.dto.vocabulary.delete.VocabularyDeletionOptions"},
+ "fetch": {"@type": "as.dto.vocabulary.fetchoptions.VocabularyFetchOptions"},
},
"vocabularyTerm": {
"attrs_new": "code vocabularyCode label description official ordinal".split(),
@@ -237,10 +203,14 @@ def openbis_definitions(entity):
"attrs": "code vocabularyCode label description official ordinal registrator registrationDate modifier modificationDate".split(),
"multi": "".split(),
"identifier": "vocabularyTermId",
- "create": { "@type": "as.dto.vocabulary.create.VocabularyTermCreation"},
- "update": { "@type": "as.dto.vocabulary.update.VocabularyTermUpdate"},
- "delete": { "@type": "as.dto.vocabulary.delete.VocabularyTermDeletionOptions"},
- "fetch": { "@type": "as.dto.vocabulary.fetchoptions.VocabularyTermFetchOptions"},
+ "create": {"@type": "as.dto.vocabulary.create.VocabularyTermCreation"},
+ "update": {"@type": "as.dto.vocabulary.update.VocabularyTermUpdate"},
+ "delete": {
+ "@type": "as.dto.vocabulary.delete.VocabularyTermDeletionOptions"
+ },
+ "fetch": {
+ "@type": "as.dto.vocabulary.fetchoptions.VocabularyTermFetchOptions"
+ },
},
"plugin": {
"attrs_new": "name description pluginType script available entityKind".split(),
@@ -248,8 +218,8 @@ def openbis_definitions(entity):
"attrs": "permId name description registrator registrationDate pluginKind entityKinds pluginType script available".split(),
"multi": "".split(),
"identifier": "pluginId",
- "pluginType": ['DYNAMIC_PROPERTY', 'MANAGED_PROPERTY', 'ENTITY_VALIDATION'],
- "entityKind": ['MATERIAL', 'EXPERIMENT', 'SAMPLE', 'DATA_SET'],
+ "pluginType": ["DYNAMIC_PROPERTY", "MANAGED_PROPERTY", "ENTITY_VALIDATION"],
+ "entityKind": ["MATERIAL", "EXPERIMENT", "SAMPLE", "DATA_SET"],
},
"person": {
"attrs_new": "userId space".split(),
@@ -258,18 +228,25 @@ def openbis_definitions(entity):
"multi": "".split(),
"identifier": "userId",
},
- "authorizationGroup" : {
+ "authorizationGroup": {
"attrs_new": "code description userIds".split(),
"attrs_up": "code description userIds".split(),
"attrs": "permId code description registrator registrationDate modificationDate users".split(),
"multi": "users".split(),
"identifier": "groupId",
},
- "roleAssignment" : {
+ "roleAssignment": {
"attrs": "id user authorizationGroup role roleLevel space project registrator registrationDate".split(),
"attrs_new": "role roleLevel user authorizationGroup role space project".split(),
"attrs_up": "role roleLevel user authorizationGroup role space project".split(),
- "role": ['POWER_USER', 'OBSERVER', 'USER', 'DISABLED', 'ADMIN', 'ETL_SERVER']
+ "role": [
+ "POWER_USER",
+ "OBSERVER",
+ "USER",
+ "DISABLED",
+ "ADMIN",
+ "ETL_SERVER",
+ ],
},
"attr2ids": {
"space": "spaceId",
@@ -295,20 +272,24 @@ def openbis_definitions(entity):
"description": "description",
"vocabulary": "vocabularyId",
"validationPlugin": "validationPluginId",
+ "metaData": "metaData",
},
"ids2type": {
- 'spaceId': {'permId': {'@type': 'as.dto.space.id.SpacePermId'}},
- 'projectId': {'permId': {'@type': 'as.dto.project.id.ProjectPermId'}},
- 'experimentId': {'permId': {'@type': 'as.dto.experiment.id.ExperimentPermId'}},
- 'tagIds': {'code': {'@type': 'as.dto.tag.id.TagCode'}},
+ "spaceId": {"permId": {"@type": "as.dto.space.id.SpacePermId"}},
+ "projectId": {"permId": {"@type": "as.dto.project.id.ProjectPermId"}},
+ "experimentId": {
+ "permId": {"@type": "as.dto.experiment.id.ExperimentPermId"}
+ },
+ "tagIds": {"code": {"@type": "as.dto.tag.id.TagCode"}},
},
"dataSetFile": {
- "search": { "@type": "dss.dto.datasetfile.search.DataSetFileSearchCriteria" }
+ "search": {"@type": "dss.dto.datasetfile.search.DataSetFileSearchCriteria"}
},
}
return entities[entity]
-get_definition_for_entity = openbis_definitions # Alias
+
+get_definition_for_entity = openbis_definitions # Alias
fetch_option = {
@@ -318,20 +299,22 @@ fetch_option = {
"space": {"@type": "as.dto.space.fetchoptions.SpaceFetchOptions"},
},
"person": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions"},
- "users": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions" },
- "user": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions" },
- "owner": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions" },
+ "users": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions"},
+ "user": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions"},
+ "owner": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions"},
"registrator": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions"},
"modifier": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions"},
"leader": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions"},
- "authorizationGroup": {"@type": "as.dto.authorizationgroup.fetchoptions.AuthorizationGroupFetchOptions"},
+ "authorizationGroup": {
+ "@type": "as.dto.authorizationgroup.fetchoptions.AuthorizationGroupFetchOptions"
+ },
"experiment": {
"@type": "as.dto.experiment.fetchoptions.ExperimentFetchOptions",
- "type": {"@type": "as.dto.experiment.fetchoptions.ExperimentTypeFetchOptions"}
+ "type": {"@type": "as.dto.experiment.fetchoptions.ExperimentTypeFetchOptions"},
},
"sample": {
"@type": "as.dto.sample.fetchoptions.SampleFetchOptions",
- "type": {"@type": "as.dto.sample.fetchoptions.SampleTypeFetchOptions"}
+ "type": {"@type": "as.dto.sample.fetchoptions.SampleTypeFetchOptions"},
},
"samples": {"@type": "as.dto.sample.fetchoptions.SampleFetchOptions"},
"sampleType": {
@@ -341,13 +324,11 @@ fetch_option = {
"propertyType": {
"@type": "as.dto.property.fetchoptions.PropertyTypeFetchOptions"
},
- "plugin": {
- "@type": "as.dto.plugin.fetchoptions.PluginFetchOptions"
- }
+ "plugin": {"@type": "as.dto.plugin.fetchoptions.PluginFetchOptions"},
},
"validationPlugin": {
"@type": "as.dto.plugin.fetchoptions.PluginFetchOptions",
- }
+ },
},
"materialType": {
"@type": "as.dto.material.fetchoptions.MaterialTypeFetchOptions",
@@ -356,13 +337,11 @@ fetch_option = {
"propertyType": {
"@type": "as.dto.property.fetchoptions.PropertyTypeFetchOptions",
},
- "plugin": {
- "@type": "as.dto.plugin.fetchoptions.PluginFetchOptions"
- }
+ "plugin": {"@type": "as.dto.plugin.fetchoptions.PluginFetchOptions"},
},
"validationPlugin": {
"@type": "as.dto.plugin.fetchoptions.PluginFetchOptions",
- }
+ },
},
"dataSetType": {
"@type": "as.dto.dataset.fetchoptions.DataSetTypeFetchOptions",
@@ -371,13 +350,11 @@ fetch_option = {
"propertyType": {
"@type": "as.dto.property.fetchoptions.PropertyTypeFetchOptions",
},
- "plugin": {
- "@type": "as.dto.plugin.fetchoptions.PluginFetchOptions"
- }
+ "plugin": {"@type": "as.dto.plugin.fetchoptions.PluginFetchOptions"},
},
"validationPlugin": {
"@type": "as.dto.plugin.fetchoptions.PluginFetchOptions",
- }
+ },
},
"experimentType": {
"@type": "as.dto.experiment.fetchoptions.ExperimentTypeFetchOptions",
@@ -386,19 +363,17 @@ fetch_option = {
"propertyType": {
"@type": "as.dto.property.fetchoptions.PropertyTypeFetchOptions",
},
- "plugin": {
- "@type": "as.dto.plugin.fetchoptions.PluginFetchOptions"
- }
- },
+ "plugin": {"@type": "as.dto.plugin.fetchoptions.PluginFetchOptions"},
+ },
"validationPlugin": {
"@type": "as.dto.plugin.fetchoptions.PluginFetchOptions",
- }
+ },
},
"dataSet": {
"@type": "as.dto.dataset.fetchoptions.DataSetFetchOptions",
- "type": {"@type": "as.dto.dataset.fetchoptions.DataSetTypeFetchOptions"},
- "parents": {"@type": "as.dto.dataset.fetchoptions.DataSetFetchOptions"},
- "children": {"@type": "as.dto.dataset.fetchoptions.DataSetFetchOptions"},
+ "type": {"@type": "as.dto.dataset.fetchoptions.DataSetTypeFetchOptions"},
+ "parents": {"@type": "as.dto.dataset.fetchoptions.DataSetFetchOptions"},
+ "children": {"@type": "as.dto.dataset.fetchoptions.DataSetFetchOptions"},
"containers": {"@type": "as.dto.dataset.fetchoptions.DataSetFetchOptions"},
"components": {"@type": "as.dto.dataset.fetchoptions.DataSetFetchOptions"},
},
@@ -409,8 +384,10 @@ fetch_option = {
},
"physicalData": {"@type": "as.dto.dataset.fetchoptions.PhysicalDataFetchOptions"},
"linkedData": {
- "externalDms": {"@type": "as.dto.externaldms.fetchoptions.ExternalDmsFetchOptions"},
- "@type": "as.dto.dataset.fetchoptions.LinkedDataFetchOptions"
+ "externalDms": {
+ "@type": "as.dto.externaldms.fetchoptions.ExternalDmsFetchOptions"
+ },
+ "@type": "as.dto.dataset.fetchoptions.LinkedDataFetchOptions",
},
"roleAssignment": {
"@type": "as.dto.roleassignment.fetchoptions.RoleAssignmentFetchOptions",
@@ -425,23 +402,21 @@ fetch_option = {
"@type": "as.dto.property.fetchoptions.PropertyTypeFetchOptions",
"vocabulary": {
"@type": "as.dto.vocabulary.fetchoptions.VocabularyFetchOptions",
- }
- }
+ },
+ },
},
"propertyType": {
"@type": "as.dto.property.fetchoptions.PropertyTypeFetchOptions",
"vocabulary": {
"@type": "as.dto.vocabulary.fetchoptions.VocabularyFetchOptions"
},
- "materialType": {
- "@type": "as.dto.material.fetchoptions.MaterialTypeFetchOptions"
+ "materialType": {
+ "@type": "as.dto.material.fetchoptions.MaterialTypeFetchOptions"
},
"semanticAnnotations": {
"@type": "as.dto.semanticannotation.fetchoptions.SemanticAnnotationFetchOptions"
},
- "registrator": {
- "@type": "as.dto.person.fetchoptions.PersonFetchOptions"
- },
+ "registrator": {"@type": "as.dto.person.fetchoptions.PersonFetchOptions"},
},
"semanticAnnotations": {
"@type": "as.dto.semanticannotation.fetchoptions.SemanticAnnotationFetchOptions"
@@ -451,9 +426,7 @@ fetch_option = {
"attachments": {"@type": "as.dto.attachment.fetchoptions.AttachmentFetchOptions"},
"attachmentsWithContent": {
"@type": "as.dto.attachment.fetchoptions.AttachmentFetchOptions",
- "content": {
- "@type": "as.dto.common.fetchoptions.EmptyFetchOptions"
- },
+ "content": {"@type": "as.dto.common.fetchoptions.EmptyFetchOptions"},
},
"script": {
"@type": "as.dto.common.fetchoptions.EmptyFetchOptions",
@@ -464,23 +437,31 @@ fetch_option = {
"vocabulary": {
"@type": "as.dto.vocabulary.fetchoptions.VocabularyFetchOptions",
},
- "vocabularyTerm": {"@type": "as.dto.vocabulary.fetchoptions.VocabularyTermFetchOptions"},
- "deletedObjects": { "@type": "as.dto.deletion.fetchoptions.DeletedObjectFetchOptions" },
- "deletion": { "@type": "as.dto.deletion.fetchoptions.DeletionFetchOptions" },
- "externalDms": { "@type": "as.dto.externaldms.fetchoptions.ExternalDmsFetchOptions"},
- "dataSetFile": { "@type": "dss.dto.datasetfile.fetchoptions.DataSetFileFetchOptions"},
+ "vocabularyTerm": {
+ "@type": "as.dto.vocabulary.fetchoptions.VocabularyTermFetchOptions"
+ },
+ "deletedObjects": {
+ "@type": "as.dto.deletion.fetchoptions.DeletedObjectFetchOptions"
+ },
+ "deletion": {"@type": "as.dto.deletion.fetchoptions.DeletionFetchOptions"},
+ "externalDms": {"@type": "as.dto.externaldms.fetchoptions.ExternalDmsFetchOptions"},
+ "dataSetFile": {
+ "@type": "dss.dto.datasetfile.fetchoptions.DataSetFileFetchOptions"
+ },
}
+
def get_fetchoption_for_entity(entity):
- entity = entity[0].lower() + entity[1:] # make first character lowercase
+ entity = entity[0].lower() + entity[1:] # make first character lowercase
try:
return fetch_option[entity]
except KeyError as e:
return {}
-def get_type_for_entity(entity, action, parents_or_children=''):
+
+def get_type_for_entity(entity, action, parents_or_children=""):
if action not in "create update delete search".split():
- raise ValueError('unknown action: {}'.format(action))
+ raise ValueError("unknown action: {}".format(action))
definition = openbis_definitions(entity)
if action in definition and not parents_or_children:
@@ -494,22 +475,30 @@ def get_type_for_entity(entity, action, parents_or_children=''):
"delete": "DeletionOptions",
"search": "SearchCriteria",
}
-
+
if parents_or_children:
return {
- "@type": "as.dto.{}.{}.{}{}{}"
- .format(entity.lower(), action, cap_entity, parents_or_children, noun[action])
+ "@type": "as.dto.{}.{}.{}{}{}".format(
+ entity.lower(),
+ action,
+ cap_entity,
+ parents_or_children,
+ noun[action],
+ )
}
else:
return {
- "@type": "as.dto.{}.{}.{}{}"
- .format(entity.lower(), action, cap_entity, noun[action])
+ "@type": "as.dto.{}.{}.{}{}".format(
+ entity.lower(), action, cap_entity, noun[action]
+ )
}
+
def get_fetchoptions(entity, including=None):
- if including is None: including = []
- including += ['@type']
- entity = entity[0].lower() + entity[1:] # make first character lowercase
+ if including is None:
+ including = []
+ including += ["@type"]
+ entity = entity[0].lower() + entity[1:] # make first character lowercase
fo = {}
for inc in including:
try:
@@ -525,8 +514,7 @@ def get_method_for_entity(entity, action):
if entity == "vocabulary":
return "{}Vocabularies".format(action)
-
+
cap_entity = entity[:1].upper() + entity[1:]
return "{}{}s".format(action, cap_entity)
-
--
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