From cc51347d9854c52f70d71fcee0f75b5af0811f24 Mon Sep 17 00:00:00 2001
From: juanf <juanf>
Date: Wed, 23 Jul 2014 09:24:53 +0000
Subject: [PATCH] SSDM-623: Copy parents and children when duplicating
subexperiments/samples (ongoing work).
SVN: 32127
---
.../reporting-plugins/newbrowserapi/script.py | 16 ++++++++++++----
1 file changed, 12 insertions(+), 4 deletions(-)
diff --git a/plasmid/source/core-plugins/newbrowser/1/dss/reporting-plugins/newbrowserapi/script.py b/plasmid/source/core-plugins/newbrowser/1/dss/reporting-plugins/newbrowserapi/script.py
index 8358b8c0eee..a505e9cdca6 100644
--- a/plasmid/source/core-plugins/newbrowser/1/dss/reporting-plugins/newbrowserapi/script.py
+++ b/plasmid/source/core-plugins/newbrowser/1/dss/reporting-plugins/newbrowserapi/script.py
@@ -166,15 +166,23 @@ def copySample(tr, parameters, tableBuilder):
#Copy children and attach to Sample
if sampleChildren != None:
for sampleChildIdentifier in sampleChildren:
- child = tr.getSampleForUpdate(sampleChildIdentifier); #Retrieve Sample child to copy
+ child = tr.getSample(sampleChildIdentifier); #Retrieve Sample child to copy
copyChildCode = parameters.get("sampleCode") + "_" + child.getCode();
copyChildIdentifier = "/" + parameters.get("sampleSpace") + "/" + copyChildCode;
# Create new sample children
- child = tr.createNewSample(copyChildIdentifier, child.getSampleType()); #Create Sample given his id
- childParents = child.getParentSampleIdentifiers();
+ childCopy = tr.createNewSample(copyChildIdentifier, child.getSampleType()); #Create Sample given his id
+ childParents = childCopy.getParentSampleIdentifiers();
childParents.add(sampleIdentifier);
- child.setParentSampleIdentifiers(childParents);
+ childCopy.setParentSampleIdentifiers(childParents);
+ searchService = tr.getSearchService();
+ propertiesDefinitions = searchService.listPropertiesDefinitionsForSampleType(child.getSampleType());
+ for propertyDefinition in propertiesDefinitions:
+ propCode = propertyDefinition.getPropertyTypeCode();
+ propValue = child.getPropertyValue(propCode);
+ if propValue != None:
+ childCopy.setPropertyValue(propCode, propValue);
+
return True;
def insertUpdateSample(tr, parameters, tableBuilder):
--
GitLab