From cbb015f55c02154202aea6ed8d3c88ebee2ece60 Mon Sep 17 00:00:00 2001
From: felmer <felmer>
Date: Wed, 30 Sep 2015 11:12:03 +0000
Subject: [PATCH] SSDM-2250: using new feature in hcs-dropbox.py
SVN: 34753
---
.../screening/4/dss/drop-boxes/hcs-dropbox/hcs-dropbox.py | 7 +++++--
1 file changed, 5 insertions(+), 2 deletions(-)
diff --git a/screening/source/core-plugins/screening/4/dss/drop-boxes/hcs-dropbox/hcs-dropbox.py b/screening/source/core-plugins/screening/4/dss/drop-boxes/hcs-dropbox/hcs-dropbox.py
index af34c12cb46..a123d5889b9 100644
--- a/screening/source/core-plugins/screening/4/dss/drop-boxes/hcs-dropbox/hcs-dropbox.py
+++ b/screening/source/core-plugins/screening/4/dss/drop-boxes/hcs-dropbox/hcs-dropbox.py
@@ -10,7 +10,7 @@ PROJECT_ID = "/%(SPACE_CODE)s/%(PROJECT_CODE)s" % vars()
EXPERIMENT_CODE = "DEMO-EXP-HCS"
EXPERIMENT_ID = "/%(SPACE_CODE)s/%(PROJECT_CODE)s/%(EXPERIMENT_CODE)s" % vars()
-PLATE_CODE = "PLATE1"
+PLATE_CODE = "PLATE"
PLATE_ID = "/%(SPACE_CODE)s/%(PLATE_CODE)s" % vars()
PLATE_GEOMETRY_PROPERTY_CODE = "$PLATE_GEOMETRY"
PLATE_GEOMETRY = "384_WELLS_16X24"
@@ -20,6 +20,7 @@ def create_space_if_needed(transaction):
space = transaction.getSpace(SPACE_CODE)
if None == space:
space = transaction.createNewSpace(SPACE_CODE, None)
+ transaction.getLogger().info('Creating new space: ' + SPACE_CODE)
space.setDescription("A demo space")
def create_project_if_needed(transaction):
@@ -27,6 +28,7 @@ def create_project_if_needed(transaction):
if None == project:
create_space_if_needed(transaction)
project = transaction.createNewProject(PROJECT_ID)
+ transaction.getLogger().info('Creating new project: ' + PROJECT_ID)
project.setDescription("A demo project")
def create_experiment_if_needed(transaction):
@@ -34,7 +36,7 @@ def create_experiment_if_needed(transaction):
exp = transaction.getExperiment(EXPERIMENT_ID)
if None == exp:
create_project_if_needed(transaction)
- print 'Creating new experiment : ' + EXPERIMENT_ID
+ transaction.getLogger().info('Creating new experiment: ' + EXPERIMENT_ID)
exp = transaction.createNewExperiment(EXPERIMENT_ID, 'SIRNA_HCS')
return exp
@@ -47,6 +49,7 @@ def create_plate_if_needed(transaction):
if None == samp:
exp = create_experiment_if_needed(transaction)
samp = transaction.createNewSample(PLATE_ID, 'PLATE')
+ transaction.getLogger().info('Creating new plate: ' + PLATE_ID)
samp.setPropertyValue(PLATE_GEOMETRY_PROPERTY_CODE, PLATE_GEOMETRY)
samp.setExperiment(exp)
--
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