From c6c6b62623ef39a9b15f025d36d17fd0c0c59ee0 Mon Sep 17 00:00:00 2001
From: barillac <barillac>
Date: Mon, 13 Apr 2015 13:31:55 +0000
Subject: [PATCH] added handling of fasta files
SVN: 33815
---
.../html/js/config/ELNPaperProfile.js | 20 +++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/ELNPaperProfile.js b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/ELNPaperProfile.js
index fba918637d9..c222b154a40 100644
--- a/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/ELNPaperProfile.js
+++ b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/ELNPaperProfile.js
@@ -236,6 +236,15 @@ $.extend(ELNPaperProfile.prototype, DefaultProfile.prototype, {
"ANNOTATION_PROPERTIES" : [{"TYPE" : "PLASMID_RELATIONSHIP", "MANDATORY" : false },{"TYPE" : "PLASMID_ANNOTATION", "MANDATORY" : false },{"TYPE" : "COMMENTS", "MANDATORY" : false }]
}
],
+ "SAMPLE_LINKS_HINT" : [
+ {
+ "LABEL" : "Plasmid",
+ "TYPE": "PLASMID",
+ "MIN_COUNT" : 0,
+ "ANNOTATION_PROPERTIES" : [{"TYPE" : "PLASMID_RELATIONSHIP", "MANDATORY" : false },{"TYPE" : "PLASMID_ANNOTATION", "MANDATORY" : false },{"TYPE" : "COMMENTS", "MANDATORY" : false },{"TYPE" : "CONTAINED", "MANDATORY" : false }]
+ }
+ ],
+ "SAMPLE_PARENTS_ANNOTATIONS_COPY" : { "YEAST" : ["PLASMID"] }
},
"CELL_LINE" : {
@@ -382,5 +391,16 @@ $.extend(ELNPaperProfile.prototype, DefaultProfile.prototype, {
freeFormTableController.init($("#" + containerId));
}
}
+
+
+ this.getDataSetTypeForFileName = function(allDatasetFiles, fileName) {
+ if(fileName.endsWith("gb") || fileName.endsWith("fasta") || fileName.endsWith("xdna") || fileName.endsWith("fa")) {
+ return "SEQ_FILE";
+ } else if(fileName.endsWith("ab1")) {
+ return "RAW_DATA";
+ } else {
+ return null;
+ }
+ }
}
});
\ No newline at end of file
--
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