From bf5a638b7faae98314f35b7522f0423d24d84652 Mon Sep 17 00:00:00 2001 From: felmer <franz-josef.elmer@id.ethz.ch> Date: Wed, 27 Jun 2018 09:01:52 +0200 Subject: [PATCH] SSDM-6731: ilumina example back to project-samples disabled --- .../illumina-ngs/tsv-files/example_samples_with_parents.tsv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/openbis_standard_technologies/dist/tarball/installer/data/examples/illumina-ngs/tsv-files/example_samples_with_parents.tsv b/openbis_standard_technologies/dist/tarball/installer/data/examples/illumina-ngs/tsv-files/example_samples_with_parents.tsv index a7aab242336..44ec8cc7692 100644 --- a/openbis_standard_technologies/dist/tarball/installer/data/examples/illumina-ngs/tsv-files/example_samples_with_parents.tsv +++ b/openbis_standard_technologies/dist/tarball/installer/data/examples/illumina-ngs/tsv-files/example_samples_with_parents.tsv @@ -1 +1 @@ -[MASTER_SAMPLE] identifier container parents experiment BIOLOGICAL_SAMPLE_ARRIVED CONTACT_PERSON_EMAIL PRINCIPAL_INVESTIGATOR_EMAIL CONTACT_PERSON_NAME PRINCIPAL_INVESTIGATOR_NAME NOTES NCBI_ORGANISM_TAXONOMY SAMPLE_KIND /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-MASTER-4 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment 2013-04-24 11:00:00 +0100 My name mail22bsse mail@bsse PI Name 9606 CHIP [RAW_SAMPLE] identifier container parents experiment CONCENTRATION_ORIGINAL_ILLUMINA EXTERNAL_SAMPLE_NAME LIBRARY_PROCESSING_POSSIBLE_YES_NO NOTES PREPARED_BY KIT_PREPARED /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-RAW-6 /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-MASTER-4 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment 4 Chip Seq1 YES me 2013-04-23 11:00:00 +0100 /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-RAW-8 /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-MASTER-4 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment 6 CHiP2 YES Linda 2013-04-20 11:00:00 +0100 [LIBRARY] identifier container parents experiment AGILENT_KIT CONCENTRATION_PREPARED_ILLUMINA DNA_CONCENTRATION_OF_LIBRARY DATA_TRANSFERRED EXTERNAL_SAMPLE_NAME FRAGMENT_SIZE_PREPARED_ILLUMINA INDEX1 INDEX2 INVOICE LOT KIT LIBRARY_PROCESSING_FAILED LIBRARY_PROCESSING_SUCCESSFUL NANO_DROP NOTES PREPARED_BY QC_AT_DBSSE KIT_PREPARED STARTING_AMOUNT_OF_SAMPLE_IN_NG /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-LIBRARY-1 /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-RAW-6 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment AGILENT_DNA_KIT_1000 5 6 CHiP1 ATCACGA FALSE CHIP_SEQ_SAMPLE_PREP FALSE FALSE CONCND3300 2013-04-24 11:00:00 +0100 /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-LIBRARY-2 /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-RAW-8 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment AGILENT_DNA_KIT_1000 5 6 CHiP2 CGATGTA FALSE CHIP_SEQ_SAMPLE_PREP FALSE FALSE CONCND3300 2013-04-24 11:00:00 +0100 [LIBRARY_POOL] identifier container parents experiment AGILENT_KIT CONCENTRATION DNA_CONCENTRATION_POOL DNA_CONCENTRATION_QGF EXTERNAL_SAMPLE_NAME FRAGMENT_SIZE_BASE_PAIRS INVOICE NANO_DROP NOTES PREPARED_BY QC_REQUIRED /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-POOL-10 "/BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-LIBRARY-1,/BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-LIBRARY-2" /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment AGILENT_HIGH_SENSITIVITY_DNA_KIT 4 44 2 400 FALSE CONCND3300 Manuel YES [ILLUMINA_FLOW_LANE] identifier container parents experiment default_space CONCENTRATION_FLOWLANE NOTES /BSSE_FLOWCELLS/FLOWCELLS/C0P8LACXX:1 /BSSE_FLOWCELLS/FLOWCELLS/C0P8LACXX /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-POOL-10 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment /BSSE_FLOWCELLS/FLOWCELLS/C0P8LACXX:2 /BSSE_FLOWCELLS/FLOWCELLS/C0P8LACXX /BSSE_FLOWCELLS/FLOWCELLS/BSSE-QGF-POOL-10 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment \ No newline at end of file +[MASTER_SAMPLE] identifier container parents experiment BIOLOGICAL_SAMPLE_ARRIVED CONTACT_PERSON_EMAIL PRINCIPAL_INVESTIGATOR_EMAIL CONTACT_PERSON_NAME PRINCIPAL_INVESTIGATOR_NAME NOTES NCBI_ORGANISM_TAXONOMY SAMPLE_KIND /BSSE_FLOWCELLS/BSSE-QGF-MASTER-4 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment 2013-04-24 11:00:00 +0100 My name mail22bsse mail@bsse PI Name 9606 CHIP [RAW_SAMPLE] identifier container parents experiment CONCENTRATION_ORIGINAL_ILLUMINA EXTERNAL_SAMPLE_NAME LIBRARY_PROCESSING_POSSIBLE_YES_NO NOTES PREPARED_BY KIT_PREPARED /BSSE_FLOWCELLS/BSSE-QGF-RAW-6 /BSSE_FLOWCELLS/BSSE-QGF-MASTER-4 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment 4 Chip Seq1 YES me 2013-04-23 11:00:00 +0100 /BSSE_FLOWCELLS/BSSE-QGF-RAW-8 /BSSE_FLOWCELLS/BSSE-QGF-MASTER-4 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment 6 CHiP2 YES Linda 2013-04-20 11:00:00 +0100 [LIBRARY] identifier container parents experiment AGILENT_KIT CONCENTRATION_PREPARED_ILLUMINA DNA_CONCENTRATION_OF_LIBRARY DATA_TRANSFERRED EXTERNAL_SAMPLE_NAME FRAGMENT_SIZE_PREPARED_ILLUMINA INDEX1 INDEX2 INVOICE LOT KIT LIBRARY_PROCESSING_FAILED LIBRARY_PROCESSING_SUCCESSFUL NANO_DROP NOTES PREPARED_BY QC_AT_DBSSE KIT_PREPARED STARTING_AMOUNT_OF_SAMPLE_IN_NG /BSSE_FLOWCELLS/BSSE-QGF-LIBRARY-1 /BSSE_FLOWCELLS/BSSE-QGF-RAW-6 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment AGILENT_DNA_KIT_1000 5 6 CHiP1 ATCACGA FALSE CHIP_SEQ_SAMPLE_PREP FALSE FALSE CONCND3300 2013-04-24 11:00:00 +0100 /BSSE_FLOWCELLS/BSSE-QGF-LIBRARY-2 /BSSE_FLOWCELLS/BSSE-QGF-RAW-8 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment AGILENT_DNA_KIT_1000 5 6 CHiP2 CGATGTA FALSE CHIP_SEQ_SAMPLE_PREP FALSE FALSE CONCND3300 2013-04-24 11:00:00 +0100 [LIBRARY_POOL] identifier container parents experiment AGILENT_KIT CONCENTRATION DNA_CONCENTRATION_POOL DNA_CONCENTRATION_QGF EXTERNAL_SAMPLE_NAME FRAGMENT_SIZE_BASE_PAIRS INVOICE NANO_DROP NOTES PREPARED_BY QC_REQUIRED /BSSE_FLOWCELLS/BSSE-QGF-POOL-10 "/BSSE_FLOWCELLS/BSSE-QGF-LIBRARY-1,/BSSE_FLOWCELLS/BSSE-QGF-LIBRARY-2" /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment AGILENT_HIGH_SENSITIVITY_DNA_KIT 4 44 2 400 FALSE CONCND3300 Manuel YES [ILLUMINA_FLOW_LANE] identifier container parents experiment default_space CONCENTRATION_FLOWLANE NOTES /BSSE_FLOWCELLS/C0P8LACXX:1 /BSSE_FLOWCELLS/C0P8LACXX /BSSE_FLOWCELLS/BSSE-QGF-POOL-10 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment /BSSE_FLOWCELLS/C0P8LACXX:2 /BSSE_FLOWCELLS/C0P8LACXX /BSSE_FLOWCELLS/BSSE-QGF-POOL-10 /BSSE_FLOWCELLS/FLOWCELLS/Test-Experiment \ No newline at end of file -- GitLab