diff --git a/deep_sequencing_unit/source/java/ch/ethz/bsse/cisd/dsu/dss/plugins/IlluminaSummaryReportingPlugin.java b/deep_sequencing_unit/source/java/ch/ethz/bsse/cisd/dsu/dss/plugins/IlluminaSummaryReportingPlugin.java index 929cd0714c7450fd3e8127316d88ab3b2907088b..56b8ba5d68ecc1083c47f50b5ea5de41e7baee67 100644 --- a/deep_sequencing_unit/source/java/ch/ethz/bsse/cisd/dsu/dss/plugins/IlluminaSummaryReportingPlugin.java +++ b/deep_sequencing_unit/source/java/ch/ethz/bsse/cisd/dsu/dss/plugins/IlluminaSummaryReportingPlugin.java @@ -132,12 +132,6 @@ public class IlluminaSummaryReportingPlugin extends AbstractTableModelReportingP software_version = "Not available"; } - Double densityRatio = chipResultSummary.getDensityRatio(); - // if (densityRatio == null) - // { - // // densityRatio = 0.0; - // } - // TODO 2010-10-20, Manuel Kohler : Cover Paired end runs List<ISerializableComparable> row = new ArrayList<ISerializableComparable>(); @@ -145,7 +139,7 @@ public class IlluminaSummaryReportingPlugin extends AbstractTableModelReportingP row.add(new IntegerTableCell(chipResultSummary.getClusterCountRaw())); row.add(new IntegerTableCell(chipResultSummary.getClusterCountPF())); row.add(new IntegerTableCell(chipResultSummary.getYield() / MEGA)); - row.add(new DoubleTableCell(densityRatio)); + row.add(new DoubleTableCell(chipResultSummary.getDensityRatio())); // PhiX Lane row.add(new IntegerTableCell(laneResultSummary.getRead().getLanes().get(4)