diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/renderer/InternalLinkCellRenderer.java b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/renderer/InternalLinkCellRenderer.java
index 75fb413277a47edb5b9b9d7391d8d24155d54d8a..0e74b76fadf45ae4b7669b77b26288051e1840c2 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/renderer/InternalLinkCellRenderer.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/renderer/InternalLinkCellRenderer.java
@@ -9,6 +9,17 @@ import ch.systemsx.cisd.openbis.generic.client.web.client.application.model.Base
public class InternalLinkCellRenderer implements GridCellRenderer<BaseEntityModel<?>>
{
+ private final boolean renderOriginalValueForEmptyToken;
+
+ public InternalLinkCellRenderer(boolean renderOriginalValueForEmptyToken)
+ {
+ this.renderOriginalValueForEmptyToken = renderOriginalValueForEmptyToken;
+ }
+
+ public InternalLinkCellRenderer()
+ {
+ this(false);
+ }
public Object render(BaseEntityModel<?> model, String property, ColumnData config,
int rowIndex, int colIndex, ListStore<BaseEntityModel<?>> store,
@@ -21,8 +32,14 @@ public class InternalLinkCellRenderer implements GridCellRenderer<BaseEntityMode
{ // TODO 2010-05-18, IA: almost the same as LinkRenderer#createLinkRenderer()
String originalValue = String.valueOf(model.get(property));
String tokenOrNull = model.tryGetLink(property);
- String href = "#" + (tokenOrNull != null ? tokenOrNull : "");
- return LinkRenderer.renderAsLinkWithAnchor(originalValue, href, false);
+ if (tokenOrNull == null && renderOriginalValueForEmptyToken)
+ {
+ return originalValue;
+ } else
+ {
+ String href = "#" + (tokenOrNull != null ? tokenOrNull : "");
+ return LinkRenderer.renderAsLinkWithAnchor(originalValue, href, false);
+ }
}
}
}
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/CodesArea.java b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/CodesArea.java
index 5b6826116b8767164efe119722f8dba8688a45cb..3f3d5e471ecf05671286cb059f383fa65e612e12 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/CodesArea.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/CodesArea.java
@@ -16,6 +16,7 @@
package ch.systemsx.cisd.openbis.generic.client.web.client.application.ui;
+import java.util.Collection;
import java.util.List;
import ch.systemsx.cisd.openbis.generic.client.web.client.application.ui.field.MultilineVarcharField;
@@ -36,7 +37,7 @@ abstract public class CodesArea<T extends ICodeHolder> extends MultilineVarcharF
setEmptyText(emptyTextMsg);
}
- public final void setCodeProviders(List<T> codeProviders)
+ public final void setCodeProviders(Collection<T> codeProviders)
{
List<String> codes = Code.extractCodes(codeProviders);
setCodes(codes);
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/columns/specific/sample/AbstractParentSampleColDef.java b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/columns/specific/sample/AbstractParentSampleColDef.java
index a9192fe0d9fa52b6b28b4a85781a8cdc3460df96..7d4787f7e6cd809f129788a82934c14961510849 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/columns/specific/sample/AbstractParentSampleColDef.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/columns/specific/sample/AbstractParentSampleColDef.java
@@ -39,13 +39,18 @@ public abstract class AbstractParentSampleColDef extends AbstractColumnDefinitio
Sample parent = tryGetParent(sample);
if (parent != null)
{
- return parent.getIdentifier();
+ return getAsValue(parent);
} else
{
return null;
}
}
+ protected final String getAsValue(Sample sample)
+ {
+ return sample.getIdentifier();
+ }
+
@Override
public String tryGetLink(Sample sample)
{
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/columns/specific/sample/ParentGeneratedFromSampleColDef.java b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/columns/specific/sample/ParentGeneratedFromSampleColDef.java
index 51f305068e7d96de2aeb4e6be90a49cbb9a870d5..c1de7882d3ea2ffc233a97f9b91bb565cd47a275 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/columns/specific/sample/ParentGeneratedFromSampleColDef.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/columns/specific/sample/ParentGeneratedFromSampleColDef.java
@@ -16,12 +16,15 @@
package ch.systemsx.cisd.openbis.generic.client.web.client.application.ui.columns.specific.sample;
+import ch.systemsx.cisd.openbis.generic.client.web.client.application.ui.widget.MultilineHTML;
import ch.systemsx.cisd.openbis.generic.shared.basic.dto.Sample;
public class ParentGeneratedFromSampleColDef extends AbstractParentSampleColDef
{
private static final String IDENTIFIER = "generatedFromParent";
+ private static final int MAX_PARENTS = 4;
+
// GWT only
public ParentGeneratedFromSampleColDef()
{
@@ -62,7 +65,19 @@ public class ParentGeneratedFromSampleColDef extends AbstractParentSampleColDef
return super.tryGetValue(sample);
} else
{
- return parentsSize + "";
+ StringBuilder sb = new StringBuilder();
+ int counter = 0;
+ for (Sample parent : sample.getParents())
+ {
+ if (counter == MAX_PARENTS)
+ {
+ sb.append("... (").append(parentsSize - MAX_PARENTS).append(" more)");
+ break;
+ }
+ sb.append(getAsValue(parent)).append("\n");
+ counter++;
+ }
+ return new MultilineHTML(sb.toString()).toString();
}
}
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/sample/SampleBrowserGrid.java b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/sample/SampleBrowserGrid.java
index a1789e6d6bf614556c00bfed9915c9db872a5c73..9f58645e23ae5e004ac6f25501e6186c8b3ef72f 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/sample/SampleBrowserGrid.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/generic/client/web/client/application/ui/sample/SampleBrowserGrid.java
@@ -42,6 +42,7 @@ import ch.systemsx.cisd.openbis.generic.client.web.client.application.framework.
import ch.systemsx.cisd.openbis.generic.client.web.client.application.framework.SampleTypeDisplayID;
import ch.systemsx.cisd.openbis.generic.client.web.client.application.model.BaseEntityModel;
import ch.systemsx.cisd.openbis.generic.client.web.client.application.model.SampleModelFactory;
+import ch.systemsx.cisd.openbis.generic.client.web.client.application.renderer.InternalLinkCellRenderer;
import ch.systemsx.cisd.openbis.generic.client.web.client.application.ui.DisplayedAndSelectedEntities;
import ch.systemsx.cisd.openbis.generic.client.web.client.application.ui.columns.framework.IColumnDefinitionKind;
import ch.systemsx.cisd.openbis.generic.client.web.client.application.ui.columns.specific.sample.AbstractParentSampleColDef;
@@ -612,9 +613,11 @@ public class SampleBrowserGrid extends
linkCellRenderer);
schema.setGridCellRendererFor(CommonSampleColDefKind.PROJECT.id(), linkCellRenderer);
// setup link renderers and listeners on parent columns
+ GridCellRenderer<BaseEntityModel<?>> parentLinkCellRenderer =
+ createParentLinkCellRenderer();
for (final AbstractParentSampleColDef parentColDef : parentColumnsSchema)
{
- schema.setGridCellRendererFor(parentColDef.getIdentifier(), linkCellRenderer);
+ schema.setGridCellRendererFor(parentColDef.getIdentifier(), parentLinkCellRenderer);
registerLinkClickListenerFor(parentColDef.getIdentifier(),
new OpenEntityDetailsTabCellClickListener()
{
@@ -629,6 +632,11 @@ public class SampleBrowserGrid extends
return schema;
}
+ protected final GridCellRenderer<BaseEntityModel<?>> createParentLinkCellRenderer()
+ {
+ return new InternalLinkCellRenderer(true);
+ }
+
@Override
protected boolean hasColumnsDefinitionChanged(ListSampleDisplayCriteria newCriteria)
{
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/generic/shared/basic/dto/Sample.java b/openbis/source/java/ch/systemsx/cisd/openbis/generic/shared/basic/dto/Sample.java
index 2fbb11ffd5a3cadbe0bfdc1e2e42ad9cd4009370..303735ea505b3cd47f46286463a88e4ebfc53d0c 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/generic/shared/basic/dto/Sample.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/generic/shared/basic/dto/Sample.java
@@ -19,6 +19,8 @@ package ch.systemsx.cisd.openbis.generic.shared.basic.dto;
import java.util.ArrayList;
import java.util.Date;
import java.util.List;
+import java.util.Set;
+import java.util.TreeSet;
import ch.systemsx.cisd.common.annotation.CollectionMapping;
import ch.systemsx.cisd.openbis.generic.shared.basic.IAttachmentHolder;
@@ -52,7 +54,7 @@ public final class Sample extends CodeWithRegistration<Sample> implements IInval
private Sample container;
- private List<Sample> parents = new ArrayList<Sample>();
+ private Set<Sample> parents = new TreeSet<Sample>();
private List<IEntityProperty> properties;
@@ -156,12 +158,12 @@ public final class Sample extends CodeWithRegistration<Sample> implements IInval
this.container = container;
}
- public List<Sample> getParents()
+ public Set<Sample> getParents()
{
return parents;
}
- public void setParents(List<Sample> parents)
+ public void setParents(Set<Sample> parents)
{
this.parents = parents;
}
@@ -182,13 +184,13 @@ public final class Sample extends CodeWithRegistration<Sample> implements IInval
throw new IllegalStateException("Sample " + getIdentifier()
+ " has more than one parent");
}
- return parents.get(0);
+ return parents.iterator().next();
}
// used only for testing
public void setGeneratedFrom(final Sample generatedFrom)
{
- parents = new ArrayList<Sample>();
+ parents = new TreeSet<Sample>();
parents.add(generatedFrom);
}
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/GenericSampleEditForm.java b/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/GenericSampleEditForm.java
index 11cf3cf31431d3f856f3db147eac6d988aeda626..eb98d7c3c561ac0803323b5aafcf6c7efc54622d 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/GenericSampleEditForm.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/GenericSampleEditForm.java
@@ -17,6 +17,7 @@
package ch.systemsx.cisd.openbis.plugin.generic.client.web.client.application.sample;
import java.util.List;
+import java.util.Set;
import ch.systemsx.cisd.common.shared.basic.utils.StringUtils;
import ch.systemsx.cisd.openbis.generic.client.web.client.application.AbstractAsyncCallback;
@@ -156,7 +157,7 @@ public final class GenericSampleEditForm extends AbstractGenericSampleRegisterEd
private void initializeGeneratedFromParent()
{
- List<Sample> parents = originalSample.getParents();
+ Set<Sample> parents = originalSample.getParents();
if (parents.size() == 1)
{
Sample parentSample = originalSample.getGeneratedFrom();
@@ -170,7 +171,7 @@ public final class GenericSampleEditForm extends AbstractGenericSampleRegisterEd
private void initializeParents()
{
// TODO 2010-08-06, Piotr Buczek: load in background? like in experiment
- List<Sample> parents = originalSample.getParents();
+ Set<Sample> parents = originalSample.getParents();
parentsArea.setSamples(parents);
}
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/GenericSampleViewer.java b/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/GenericSampleViewer.java
index c2a99e4602d8000b7abd410e297df23c23cbe54c..d095dc737244b3096baa8f750f2fcb6bfad4c835 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/GenericSampleViewer.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/GenericSampleViewer.java
@@ -202,17 +202,17 @@ abstract public class GenericSampleViewer extends AbstractViewer<Sample> impleme
containerSamplesSection = new ContainerSamplesSection(viewContext, generator);
containerSamplesSection.setDisplayID(DisplayTypeIDGenerator.CONTAINER_SAMPLES_SECTION,
displayIdSuffix);
- container.addPanel(containerSamplesSection);
+ container.addPanel(containerSamplesSection, false);
// Derived samples
derivedSamplesSection = new DerivedSamplesSection(viewContext, generator);
derivedSamplesSection.setDisplayID(DisplayTypeIDGenerator.DERIVED_SAMPLES_SECTION,
displayIdSuffix);
- container.addPanel(derivedSamplesSection);
+ container.addPanel(derivedSamplesSection, false);
// Parent samples
parentSamplesSection = new ParentSamplesSection(viewContext, generator);
parentSamplesSection.setDisplayID(DisplayTypeIDGenerator.PARENT_SAMPLES_SECTION,
displayIdSuffix);
- container.addPanel(parentSamplesSection);
+ container.addPanel(parentSamplesSection, false);
// Data Sets
CheckBox showOnlyDirectlyConnectedCheckBox = createShowOnlyDirectlyConnectedCheckBox();
dataSetBrowser =
@@ -290,11 +290,11 @@ abstract public class GenericSampleViewer extends AbstractViewer<Sample> impleme
{
properties.put(messageProvider.getMessage(Dict.DERIVED_SAMPLE) + "s", generated.length);
}
- final List<Sample> parents = sample.getParents();
+ final Set<Sample> parents = sample.getParents();
final int parentsSize = parents.size();
if (parentsSize == 1)
{
- properties.put(messageProvider.getMessage(Dict.PARENT), parents.get(0));
+ properties.put(messageProvider.getMessage(Dict.PARENT), parents.iterator().next());
} else if (parentsSize > 1)
{
properties.put(messageProvider.getMessage(Dict.PARENTS), parentsSize);
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/SamplesArea.java b/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/SamplesArea.java
index 2354cbaa0bb2f0c25dff1c04bcfc187800f7e983..8772464e680d64079ad63ea155e8628ba19e63af 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/SamplesArea.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/client/web/client/application/sample/SamplesArea.java
@@ -16,6 +16,7 @@
package ch.systemsx.cisd.openbis.plugin.generic.client.web.client.application.sample;
+import java.util.Collection;
import java.util.List;
import ch.systemsx.cisd.openbis.generic.client.web.client.application.ui.CodesArea;
@@ -42,7 +43,7 @@ abstract public class SamplesArea extends CodesArea<Sample>
return tryGetModifiedItemList();
}
- public final void setSamples(List<Sample> samples)
+ public final void setSamples(Collection<Sample> samples)
{
setCodeProviders(samples);
}
diff --git a/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/server/GenericServer.java b/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/server/GenericServer.java
index 105979dc8b67521b312f28c5705aa8fa69d4ddf6..24d4167ac95f8ee7480ef813fd3712060b65f10c 100644
--- a/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/server/GenericServer.java
+++ b/openbis/source/java/ch/systemsx/cisd/openbis/plugin/generic/server/GenericServer.java
@@ -19,6 +19,7 @@ package ch.systemsx.cisd.openbis.plugin.generic.server;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collection;
+import java.util.Collections;
import java.util.Date;
import java.util.HashMap;
import java.util.HashSet;
@@ -681,7 +682,9 @@ public final class GenericServer extends AbstractServer<IGenericServer> implemen
SampleUpdateResult result = new SampleUpdateResult();
SamplePE sample = sampleBO.getSample();
result.setModificationDate(sample.getModificationDate());
- result.setParents(Code.extractCodes(sample.getParents()));
+ List<String> parents = Code.extractCodes(sample.getParents());
+ Collections.sort(parents);
+ result.setParents(parents);
return result;
}