From 9e6ab2b7d972fd8d43eab6f29b60c9c6949ee021 Mon Sep 17 00:00:00 2001
From: barillac <barillac>
Date: Fri, 14 Aug 2015 14:43:52 +0000
Subject: [PATCH] change oligo names from US to UC
SVN: 34461
---
.../1/dss/drop-boxes/weismigration/migration.py | 9 ++++++---
1 file changed, 6 insertions(+), 3 deletions(-)
diff --git a/plasmid/source/core-plugins/weismigration/1/dss/drop-boxes/weismigration/migration.py b/plasmid/source/core-plugins/weismigration/1/dss/drop-boxes/weismigration/migration.py
index 38cfeba728e..e822886e676 100644
--- a/plasmid/source/core-plugins/weismigration/1/dss/drop-boxes/weismigration/migration.py
+++ b/plasmid/source/core-plugins/weismigration/1/dss/drop-boxes/weismigration/migration.py
@@ -96,7 +96,10 @@ def setEntityProperties(tr, definition, entity, properties):
if propertyDefinition[2] == "pKW Number":
propertyValue = "pKW" + propertyValue
-
+
+ if propertyDefinition[2] == "UC Number":
+ if re.search("US", propertyValue):
+ propertyValue =propertyValue.replace("US", "UC").strip(" ")
if propertyDefinition is not None: #Sometimes special fields are added for other purposes, these should not be set
entity.setPropertyValue(propertyCode, propertyValue)
@@ -714,8 +717,8 @@ adaptors = [
#EnzymeAdaptor(fmConnString, fmUser, fmPass, "Weis_Restriction_enzymes"),
#ChemicalAdaptor(fmConnString, fmUser, fmPass, "Weis_Chemicals"),
#AntibodyAdaptor(fmConnString, fmUser, fmPass, "Weis _Antibodies"),
- #OligoAdaptor(fmConnString, fmUser, fmPass, "Weis_Oligos"),
- PlasmidAdaptor(fmConnString, fmUser, fmPass, "Weis_Plasmids"),
+ OligoAdaptor(fmConnString, fmUser, fmPass, "Weis_Oligos"),
+ #PlasmidAdaptor(fmConnString, fmUser, fmPass, "Weis_Plasmids"),
#StrainAdaptor(fmConnString, fmUser, fmPass, "Weis_Yeast_Strains_070715_Clone_for_testing2"),
#StrainMultipleValuesAdaptor(fmConnString, fmUser, fmPass, "Weis_Yeast_Strains_070715_Clone_for_testing2")
]
--
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