From 9cebdb0a23dd429a2db0d3520d81a0d533b151c8 Mon Sep 17 00:00:00 2001
From: juanf <juanf>
Date: Fri, 7 Nov 2014 15:55:53 +0000
Subject: [PATCH] SSDM-1069 : PAPER - Widget for Comments
SVN: 32759
---
.../newbrowser/1/as/initialize-master-data.py | 439 ++++++++++--------
.../newbrowser/1/compatibility/comments.py | 174 +++++++
.../newbrowser/1/compatibility/managed.py | 17 +-
3 files changed, 422 insertions(+), 208 deletions(-)
create mode 100644 plasmid/source/core-plugins/newbrowser/1/compatibility/comments.py
diff --git a/plasmid/source/core-plugins/newbrowser/1/as/initialize-master-data.py b/plasmid/source/core-plugins/newbrowser/1/as/initialize-master-data.py
index aebbcc59419..3bb007802c8 100644
--- a/plasmid/source/core-plugins/newbrowser/1/as/initialize-master-data.py
+++ b/plasmid/source/core-plugins/newbrowser/1/as/initialize-master-data.py
@@ -14,7 +14,14 @@
# limitations under the License.
#
+##
+## Configuration
+##
+#PATH_TO_MANAGE_PROPERTIES_SCRIPTS = "/Users/juanf/Documents/workspace/openbis/source/core-plugins/newbrowser/1/compatibility/";
+PATH_TO_MANAGE_PROPERTIES_SCRIPTS = None;
+
# MasterDataRegistrationTransaction Class
+import os
import ch.systemsx.cisd.openbis.generic.server.jython.api.v1.DataType as DataType
##
@@ -68,9 +75,9 @@ def addPropertiesToSamples(sampleTypeCodes, properties):
def addProperties(entity, properties):
for property in properties:
- addProperty(entity, property[0], property[1], property[2], property[3], property[4], property[5]);
+ addProperty(entity, property[0], property[1], property[2], property[3], property[4], property[5], property[6]);
-def addProperty(entity, propertyCode, section, propertyLabel, dataType, vocabularyCode, propertyDescription):
+def addProperty(entity, propertyCode, section, propertyLabel, dataType, vocabularyCode, propertyDescription, managedScript):
property = None;
if propertyCode in propertiesCache:
@@ -80,6 +87,9 @@ def addProperty(entity, propertyCode, section, propertyLabel, dataType, vocabula
propertyAssignment = tr.assignPropertyType(entity, property);
propertyAssignment.setSection(section);
+ if managedScript != None:
+ propertyAssignment.setManaged(True);
+ propertyAssignment.setScriptName(managedScript);
def createProperty(propertyCode, dataType, propertyLabel, propertyDescription, vocabularyCode):
property = tr.getOrCreateNewPropertyType(propertyCode, dataType);
@@ -90,6 +100,31 @@ def createProperty(propertyCode, dataType, propertyLabel, propertyDescription, v
property.setVocabulary(vocabulariesCache[vocabularyCode]);
return property;
+##
+## Manage properties scripts
+##
+annotationsScriptName = None;
+commentsScriptName = None;
+
+if PATH_TO_MANAGE_PROPERTIES_SCRIPTS != None:
+ annotationsScriptName = "ANNOTATIONS";
+ annotationsScriptAsString = open(PATH_TO_MANAGE_PROPERTIES_SCRIPTS + "managed.py", 'r').read();
+ annotationsScript = tr.getOrCreateNewScript(annotationsScriptName);
+ annotationsScript.setName("Annotations");
+ annotationsScript.setDescription("Annotations Handler");
+ annotationsScript.setScript(annotationsScriptAsString);
+ annotationsScript.setScriptType("MANAGED_PROPERTY");
+ annotationsScript.setEntityForScript("SAMPLE");
+
+ commentsScriptName = "COMMENTS";
+ commentsScriptAsString = open(PATH_TO_MANAGE_PROPERTIES_SCRIPTS + "comments.py", 'r').read();
+ commentsScript = tr.getOrCreateNewScript(commentsScriptName);
+ commentsScript.setName("Comments");
+ commentsScript.setDescription("Comments Handler");
+ commentsScript.setScript(commentsScriptAsString);
+ commentsScript.setScriptType("MANAGED_PROPERTY");
+ commentsScript.setEntityForScript("SAMPLE");
+
##
## Vocabulary Types
##
@@ -384,11 +419,11 @@ createProperty("PLASMID_RELATIONSHIP", DataType.CONTROLLEDVOCABULARY, "Plasmid r
createDataSetTypeWithProperties("ELN_PREVIEW", "PHYSICAL", "ELN Preview image", []);
createDataSetTypeWithProperties("SEQ_FILE", "PHYSICAL", "", [
- ["NOTES", "General information", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes regarding the dataset"],
+ ["NOTES", "General information", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes regarding the dataset", None],
]);
createDataSetTypeWithProperties("RAW_DATA", "PHYSICAL", "", [
- ["NOTES", "General information", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes regarding the dataset"],
+ ["NOTES", "General information", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes regarding the dataset", None],
]);
##
@@ -412,13 +447,13 @@ createExperimentTypeWithProperties("PCR_PROTOCOL", "BOX TO HOLD SAMPLES OF THIS
createExperimentTypeWithProperties("WESTERN_BLOTTING_PROTOCOL", "BOX TO HOLD SAMPLES OF THIS TYPE FOR ORGANIZATIONAL PURPOSES", []);
createExperimentTypeWithProperties("DEFAULT_EXPERIMENT", "Default Experiment", [
- ["NAME", "General", "Name", DataType.VARCHAR, None, "Name"],
- ["EXPERIMENTAL_GOALS", "General", "Experimental goals", DataType.MULTILINE_VARCHAR, None, "Goal of the experiment"],
- ["GRANT", "General", "Grant", DataType.VARCHAR, None, "grant name"],
- ["START_DATE", "General", "Start Date", DataType.TIMESTAMP, None, "Start Date"],
- ["END_DATE", "General", "End Date", DataType.TIMESTAMP, None, "End Date"],
- ["EXPERIMENTAL_RESULTS","General", "Experimental results", DataType.MULTILINE_VARCHAR, None, "Brief summary of the results obtained"],
- ["XMLCOMMENTS", "Comments","Comments List", DataType.XML, None, "Several comments can be added by different users"]
+ ["NAME", "General", "Name", DataType.VARCHAR, None, "Name", None],
+ ["EXPERIMENTAL_GOALS", "General", "Experimental goals", DataType.MULTILINE_VARCHAR, None, "Goal of the experiment", None],
+ ["GRANT", "General", "Grant", DataType.VARCHAR, None, "grant name", None],
+ ["START_DATE", "General", "Start Date", DataType.TIMESTAMP, None, "Start Date", None],
+ ["END_DATE", "General", "End Date", DataType.TIMESTAMP, None, "End Date", None],
+ ["EXPERIMENTAL_RESULTS","General", "Experimental results", DataType.MULTILINE_VARCHAR, None, "Brief summary of the results obtained", None],
+ ["XMLCOMMENTS", "Comments","Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName]
]);
##
@@ -426,183 +461,183 @@ createExperimentTypeWithProperties("DEFAULT_EXPERIMENT", "Default Experiment", [
##
createSampleTypeWithProperties("ANTIBODY", "", [
- ["NAME", "General", "Name", DataType.VARCHAR, None, "Name"],
- ["HOST", "General", "Host", DataType.CONTROLLEDVOCABULARY, "HOST", "Host used to produce the antibody"],
- ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab"],
- ["DETECTION", "General", "Detection", DataType.CONTROLLEDVOCABULARY, "DETECTION","Protein detection system (fill in this information only for secondary antibodies)"],
- ["EPITOPE", "General", "Epitope", DataType.MULTILINE_VARCHAR, None, "Epitope of the antibody"],
- ["CLONALITY", "General", "Clonality", DataType.CONTROLLEDVOCABULARY, "CLONALITY","Clonality of the antibody"],
- ["ISOTYPE", "General", "Isotype", DataType.MULTILINE_VARCHAR, None, "Isotype of the antibody"],
- ["SUPPLIER", "Supplier and storage", "Supplier", DataType.MULTILINE_VARCHAR, None, "Supplier of the product"],
- ["ARTICLE_NUMBER", "Supplier and storage", "Art. Number", DataType.MULTILINE_VARCHAR, None, "Article number of the product"],
- ["STORAGE", "Supplier and storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product"],
- ["STOCK_CONCENTRATION", "Supplier and storage", "Stock concentration", DataType.VARCHAR, None, "Stock concentration of the solution where the product is kept in the lab"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.VARCHAR, None, "Name", None],
+ ["HOST", "General", "Host", DataType.CONTROLLEDVOCABULARY, "HOST", "Host used to produce the antibody", None],
+ ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab", None],
+ ["DETECTION", "General", "Detection", DataType.CONTROLLEDVOCABULARY, "DETECTION","Protein detection system (fill in this information only for secondary antibodies)", None],
+ ["EPITOPE", "General", "Epitope", DataType.MULTILINE_VARCHAR, None, "Epitope of the antibody", None],
+ ["CLONALITY", "General", "Clonality", DataType.CONTROLLEDVOCABULARY, "CLONALITY","Clonality of the antibody", None],
+ ["ISOTYPE", "General", "Isotype", DataType.MULTILINE_VARCHAR, None, "Isotype of the antibody", None],
+ ["SUPPLIER", "Supplier and storage", "Supplier", DataType.MULTILINE_VARCHAR, None, "Supplier of the product", None],
+ ["ARTICLE_NUMBER", "Supplier and storage", "Art. Number", DataType.MULTILINE_VARCHAR, None, "Article number of the product", None],
+ ["STORAGE", "Supplier and storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product", None],
+ ["STOCK_CONCENTRATION", "Supplier and storage", "Stock concentration", DataType.VARCHAR, None, "Stock concentration of the solution where the product is kept in the lab", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("CHEMICAL", "", [
- ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name"],
- ["SUPPLIER", "Supplier and storage", "Supplier", DataType.MULTILINE_VARCHAR, None, "Supplier of the product"],
- ["ARTICLE_NUMBER", "Supplier and storage", "Art. Number", DataType.MULTILINE_VARCHAR, None, "Article number of the product"],
- ["STORAGE", "Supplier and storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name", None],
+ ["SUPPLIER", "Supplier and storage", "Supplier", DataType.MULTILINE_VARCHAR, None, "Supplier of the product", None],
+ ["ARTICLE_NUMBER", "Supplier and storage", "Art. Number", DataType.MULTILINE_VARCHAR, None, "Article number of the product", None],
+ ["STORAGE", "Supplier and storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("ENZYME", "", [
- ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name"],
- ["SUPPLIER", "Supplier and storage", "Supplier", DataType.MULTILINE_VARCHAR, None, "Supplier of the product"],
- ["ARTICLE_NUMBER", "Supplier and storage", "Art. Number", DataType.MULTILINE_VARCHAR, None, "Article number of the product"],
- ["KIT", "Supplier and storage", "Kit including", DataType.MULTILINE_VARCHAR, None, "What the company includes with the enzyme"],
- ["STORAGE", "Supplier and storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name", None],
+ ["SUPPLIER", "Supplier and storage", "Supplier", DataType.MULTILINE_VARCHAR, None, "Supplier of the product", None],
+ ["ARTICLE_NUMBER", "Supplier and storage", "Art. Number", DataType.MULTILINE_VARCHAR, None, "Article number of the product", None],
+ ["KIT", "Supplier and storage", "Kit including", DataType.MULTILINE_VARCHAR, None, "What the company includes with the enzyme", None],
+ ["STORAGE", "Supplier and storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("MEDIA", "", [
- ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name"],
- ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab"],
- ["ORGANISM", "General", "Organism", DataType.CONTROLLEDVOCABULARY, "ORGANISM", "For what organism this medium is used"],
- ["STORAGE", "Storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product"],
- ["STOCK_CONCENTRATION", "Storage", "Stock concentration", DataType.VARCHAR, None, "Stock concentration of the solution where the product is kept in the lab"],
- ["STERILIZATION", "Storage", "Sterilization", DataType.CONTROLLEDVOCABULARY, "STERILIZATION","How the solution/buffer is sterilized when prepared"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Deatails for solution/buffer preparation"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name", None],
+ ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab", None],
+ ["ORGANISM", "General", "Organism", DataType.CONTROLLEDVOCABULARY, "ORGANISM", "For what organism this medium is used", None],
+ ["STORAGE", "Storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product", None],
+ ["STOCK_CONCENTRATION", "Storage", "Stock concentration", DataType.VARCHAR, None, "Stock concentration of the solution where the product is kept in the lab", None],
+ ["STERILIZATION", "Storage", "Sterilization", DataType.CONTROLLEDVOCABULARY, "STERILIZATION","How the solution/buffer is sterilized when prepared", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Deatails for solution/buffer preparation", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("SOLUTION_BUFFER", "", [
- ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name"],
- ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab"],
- ["DETAILS", "Recipe", "Details", DataType.MULTILINE_VARCHAR, None, "Details and tips about how to prepare the solution/buffer"],
- ["STORAGE", "Storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product"],
- ["STOCK_CONCENTRATION", "Storage", "Stock concentration", DataType.VARCHAR, None, "Stock concentration of the solution where the product is kept in the lab"],
- ["STERILIZATION", "Storage", "Sterilization", DataType.CONTROLLEDVOCABULARY, "STERILIZATION","How the solution/buffer is sterilized when prepared"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name", None],
+ ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab", None],
+ ["DETAILS", "Recipe", "Details", DataType.MULTILINE_VARCHAR, None, "Details and tips about how to prepare the solution/buffer", None],
+ ["STORAGE", "Storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product", None],
+ ["STOCK_CONCENTRATION", "Storage", "Stock concentration", DataType.VARCHAR, None, "Stock concentration of the solution where the product is kept in the lab", None],
+ ["STERILIZATION", "Storage", "Sterilization", DataType.CONTROLLEDVOCABULARY, "STERILIZATION","How the solution/buffer is sterilized when prepared", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("OLIGO", "", [
- ["TARGET", "General", "Target", DataType.MULTILINE_VARCHAR, None, "Target of the oligonucleotide"],
- ["DIRECTION", "Details", "Direction", DataType.CONTROLLEDVOCABULARY, "DIRECTION", "Direction of the oligonucleotide"],
- ["RESTRICTION_ENZYME", "Details", "Restriction Enzyme", DataType.MULTILINE_VARCHAR, None, "Restriction sites in the oligonucleotide"],
- ["MODIFICATIONS", "Details", "Modifications", DataType.MULTILINE_VARCHAR, None, "Modifications of the ordered oligonucleotide"],
- ["SEQUENC", "Details", "Sequence", DataType.MULTILINE_VARCHAR, None, "Sequence of the oligonucleotide"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["TARGET", "General", "Target", DataType.MULTILINE_VARCHAR, None, "Target of the oligonucleotide", None],
+ ["DIRECTION", "Details", "Direction", DataType.CONTROLLEDVOCABULARY, "DIRECTION", "Direction of the oligonucleotide", None],
+ ["RESTRICTION_ENZYME", "Details", "Restriction Enzyme", DataType.MULTILINE_VARCHAR, None, "Restriction sites in the oligonucleotide", None],
+ ["MODIFICATIONS", "Details", "Modifications", DataType.MULTILINE_VARCHAR, None, "Modifications of the ordered oligonucleotide", None],
+ ["SEQUENC", "Details", "Sequence", DataType.MULTILINE_VARCHAR, None, "Sequence of the oligonucleotide", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("RNA", "", [
- ["RNA_NAME", "General", "Name of RNA", DataType.VARCHAR, None, "Name of the RNA: species/number/strand"],
- ["TARGET", "General", "Target of the RNA", DataType.VARCHAR, None, "Target of the oligonucleotide"],
- ["TYPE", "General", "Type of RNA", DataType.CONTROLLEDVOCABULARY, "RNA_TYPE", "Type of RNA in terms of function: mimic of RNAi or inhibitor of RNAi"],
- ["STRAND", "Details", "Strand", DataType.CONTROLLEDVOCABULARY, "STRAND", "Double or single strand RNA"],
- ["BACKBONE_TYPE", "Details", "Backbone type", DataType.CONTROLLEDVOCABULARY, "RNA_BACKBONE", "Type of backbone, modifications in the backbone"],
- ["MODIFICATIONS", "Details", "Modifications", DataType.VARCHAR, None, "Modifications of the ordered oligonucleotide"],
- ["SEQUENCE", "Details", "Sequence", DataType.MULTILINE_VARCHAR, None, "Sequence of the oligonucleotide"],
- ["SUPPLIER", "Supplier and storage", "Supplier", DataType.MULTILINE_VARCHAR, None, "Supplier of the product"],
- ["ARTICLE_NUMBER", "Supplier and storage", "Art. Number", DataType.MULTILINE_VARCHAR, None, "Article number of the product"],
- ["STORAGE", "Supplier and storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["RNA_NAME", "General", "Name of RNA", DataType.VARCHAR, None, "Name of the RNA: species/number/strand", None],
+ ["TARGET", "General", "Target of the RNA", DataType.VARCHAR, None, "Target of the oligonucleotide", None],
+ ["TYPE", "General", "Type of RNA", DataType.CONTROLLEDVOCABULARY, "RNA_TYPE", "Type of RNA in terms of function: mimic of RNAi or inhibitor of RNAi", None],
+ ["STRAND", "Details", "Strand", DataType.CONTROLLEDVOCABULARY, "STRAND", "Double or single strand RNA", None],
+ ["BACKBONE_TYPE", "Details", "Backbone type", DataType.CONTROLLEDVOCABULARY, "RNA_BACKBONE", "Type of backbone, modifications in the backbone", None],
+ ["MODIFICATIONS", "Details", "Modifications", DataType.VARCHAR, None, "Modifications of the ordered oligonucleotide", None],
+ ["SEQUENCE", "Details", "Sequence", DataType.MULTILINE_VARCHAR, None, "Sequence of the oligonucleotide", None],
+ ["SUPPLIER", "Supplier and storage", "Supplier", DataType.MULTILINE_VARCHAR, None, "Supplier of the product", None],
+ ["ARTICLE_NUMBER", "Supplier and storage", "Art. Number", DataType.MULTILINE_VARCHAR, None, "Article number of the product", None],
+ ["STORAGE", "Supplier and storage", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("PLASMID", "", [
- ["PLASMID_NAME", "General", "Plasmid", DataType.VARCHAR, None, "Plasmid name"],
- ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample"],
- ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number"],
- ["BACKBONE", "Details", "Backbone", DataType.CONTROLLEDVOCABULARY, "BACKBONE", "Backbone of the plasmid"],
- ["BACTERIAL_ANTIBIOTIC_RESISTANCE", "Details", "Bacterial Antibiotic Resistance", DataType.CONTROLLEDVOCABULARY, "BACTERIAL_ANTIBIOTIC_RESISTANCE", "Bacterial antibiotic resistance"],
- ["MARKER", "Details", "Marke", DataType.CONTROLLEDVOCABULARY, "MARKER", "Marker to select the strain/cell line after transformation/transfection"],
- ["OTHER_MARKER", "Details", "Other Marker", DataType.VARCHAR, None, "Other marker useful for selection"],
- ["FLANKING_RESTRICTION_ENZYMES", "Details", "Flanking Restriction Enzymes", DataType.VARCHAR, None, "Restriction enzymes sites flanking the insert of the plasmid"],
- ["OLIGOS_TEMPLATE", "Details", "Oligos and template", DataType.MULTILINE_VARCHAR, None, "Oligos and template used to clone the single parts of the plasmid"],
- ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["PLASMID_NAME", "General", "Plasmid", DataType.VARCHAR, None, "Plasmid name", None],
+ ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample", None],
+ ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number", None],
+ ["BACKBONE", "Details", "Backbone", DataType.CONTROLLEDVOCABULARY, "BACKBONE", "Backbone of the plasmid", None],
+ ["BACTERIAL_ANTIBIOTIC_RESISTANCE", "Details", "Bacterial Antibiotic Resistance", DataType.CONTROLLEDVOCABULARY, "BACTERIAL_ANTIBIOTIC_RESISTANCE", "Bacterial antibiotic resistance", None],
+ ["MARKER", "Details", "Marke", DataType.CONTROLLEDVOCABULARY, "MARKER", "Marker to select the strain/cell line after transformation/transfection", None],
+ ["OTHER_MARKER", "Details", "Other Marker", DataType.VARCHAR, None, "Other marker useful for selection", None],
+ ["FLANKING_RESTRICTION_ENZYMES", "Details", "Flanking Restriction Enzymes", DataType.VARCHAR, None, "Restriction enzymes sites flanking the insert of the plasmid", None],
+ ["OLIGOS_TEMPLATE", "Details", "Oligos and template", DataType.MULTILINE_VARCHAR, None, "Oligos and template used to clone the single parts of the plasmid", None],
+ ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("BACTERIA", "", [
- ["BACTERIA_STRAIN_NAME", "General", "Bacteria strain name", DataType.VARCHAR, None, "Bacterial strain name"],
- ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample"],
- ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number"],
- ["BACTERIA_GENOTYPE", "Genotype", "Bacteria genotype", DataType.MULTILINE_VARCHAR, None, "Bacterial genotype"],
- ["MARKERS", "Genotype", "Markers", DataType.MULTILINE_VARCHAR, None, "Markers available in the strain for further genetic modifications"],
- ["ORIGIN", "Origin", "Origin", DataType.CONTROLLEDVOCABULARY, "ORIGIN", "How the strain/cell line was produced"],
- ["STRAIN_CHECK", "Origin", "Strain Check", DataType.CONTROLLEDVOCABULARY, "CHECK", "Check done to verify the modifications introduced in the strain"],
- ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["BACTERIA_STRAIN_NAME", "General", "Bacteria strain name", DataType.VARCHAR, None, "Bacterial strain name", None],
+ ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample", None],
+ ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number", None],
+ ["BACTERIA_GENOTYPE", "Genotype", "Bacteria genotype", DataType.MULTILINE_VARCHAR, None, "Bacterial genotype", None],
+ ["MARKERS", "Genotype", "Markers", DataType.MULTILINE_VARCHAR, None, "Markers available in the strain for further genetic modifications", None],
+ ["ORIGIN", "Origin", "Origin", DataType.CONTROLLEDVOCABULARY, "ORIGIN", "How the strain/cell line was produced", None],
+ ["STRAIN_CHECK", "Origin", "Strain Check", DataType.CONTROLLEDVOCABULARY, "CHECK", "Check done to verify the modifications introduced in the strain", None],
+ ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("YEAST", "", [
- ["YEAST_STRAIN_NAME", "General", "Yeast strain name", DataType.MULTILINE_VARCHAR, None, "Yeast strain name"],
- ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample"],
- ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number"],
- ["GENETIC_BACKGROUND", "Genotype", "Genetic Background", DataType.CONTROLLEDVOCABULARY, "GENETIC_BACKGROUND", "Genetic background of the yeast strain"],
- ["MATING_TYPE", "Genotype", "Mating Type", DataType.CONTROLLEDVOCABULARY, "MATING_TYPE", "Mating type or ploidy of the yeast strain"],
- ["BACKGROUND-SPECIFIC_MARKERS", "Genotype", "Background-specific markers", DataType.CONTROLLEDVOCABULARY, "BACKGROUND_SPECIFIC_MARKERS", "Background-specific markers available in the strain for further genetic modifications"],
- ["COMMON_MARKERS", "Genotype", "Common markers", DataType.CONTROLLEDVOCABULARY, "COMMON_MARKERS", "Common markers available in the strain for further genetic modifications"],
- ["ENDOGENOUS_PLASMID", "Genotype", "Endogenous 2micron plasmid in yeast", DataType.CONTROLLEDVOCABULARY, "ENDOGENOUS_PLASMID", "Presence of an endogenous cir 2micron plasmid"],
- ["ORIGIN", "Origin", "Origin", DataType.CONTROLLEDVOCABULARY, "ORIGIN", "How the strain/cell line was produced"],
- ["STRAIN_CHECK", "Origin", "Strain Check", DataType.CONTROLLEDVOCABULARY, "CHECK", "Check done to verify the modifications introduced in the strain"],
- ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", None, "Annotations State", DataType.XML, None, "Annotations State"]
+ ["YEAST_STRAIN_NAME", "General", "Yeast strain name", DataType.MULTILINE_VARCHAR, None, "Yeast strain name", None],
+ ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample", None],
+ ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number", None],
+ ["GENETIC_BACKGROUND", "Genotype", "Genetic Background", DataType.CONTROLLEDVOCABULARY, "GENETIC_BACKGROUND", "Genetic background of the yeast strain", None],
+ ["MATING_TYPE", "Genotype", "Mating Type", DataType.CONTROLLEDVOCABULARY, "MATING_TYPE", "Mating type or ploidy of the yeast strain", None],
+ ["BACKGROUND-SPECIFIC_MARKERS", "Genotype", "Background-specific markers", DataType.CONTROLLEDVOCABULARY, "BACKGROUND_SPECIFIC_MARKERS", "Background-specific markers available in the strain for further genetic modifications", None],
+ ["COMMON_MARKERS", "Genotype", "Common markers", DataType.CONTROLLEDVOCABULARY, "COMMON_MARKERS", "Common markers available in the strain for further genetic modifications", None],
+ ["ENDOGENOUS_PLASMID", "Genotype", "Endogenous 2micron plasmid in yeast", DataType.CONTROLLEDVOCABULARY, "ENDOGENOUS_PLASMID", "Presence of an endogenous cir 2micron plasmid", None],
+ ["ORIGIN", "Origin", "Origin", DataType.CONTROLLEDVOCABULARY, "ORIGIN", "How the strain/cell line was produced", None],
+ ["STRAIN_CHECK", "Origin", "Strain Check", DataType.CONTROLLEDVOCABULARY, "CHECK", "Check done to verify the modifications introduced in the strain", None],
+ ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", None, "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("CELL_LINE", "", [
- ["CELL_LINE_NAME", "General", "Cell line name", DataType.VARCHAR, None, "Name of the cell line"],
- ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample"],
- ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number"],
- ["SPECIES", "Genotype", "Species", DataType.CONTROLLEDVOCABULARY, "SPECIES", "Species to which the cell line belongs"],
- ["CELL_TYPE", "Genotype", "Cell type", DataType.CONTROLLEDVOCABULARY, "CELL_TYPE", "Cell type of the cell line"],
- ["ORIGIN", "Origin", "Origin", DataType.CONTROLLEDVOCABULARY, "ORIGIN", "How the strain/cell line was produced"],
- ["CLONE_NO", "Origin", "Clone #", DataType.INTEGER, None, "Clone number"],
- ["CHECK", "Origin", "Check", DataType.CONTROLLEDVOCABULARY, "CHECK", "Check done to verify the modifications introduced in the cell line"],
- ["CREATION_DATE", "Origin", "Creation date", DataType.TIMESTAMP, None, "Creation date of the cell line"],
- ["MODIFICATION_DATE", "Origin", "Modification date", DataType.TIMESTAMP, None, "Modification date of the cell line"],
- ["FREEZING_DATE", "Origin", "Freezing date", DataType.TIMESTAMP, None, "Freezing date (if more than one, add the latest)"],
- ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab"],
- ["MEDIUM", "Cultivation", "Medium", DataType.CONTROLLEDVOCABULARY, "CELL_MEDIUM", "Medium used to cultivate or manipulate the cell line"],
- ["GROWTH_TEMP", "Cultivation", "Growth temp. ( °C)", DataType.INTEGER, None, "Growth temperature of the cell line"],
- ["CELL_CO2", "Cultivation", "% CO2", DataType.INTEGER, None, "Percentage of CO2 needed for the cultivation of the cell line"],
- ["SELECTION_MARKER", "Cultivation", "Selection marker", DataType.VARCHAR, None, "Special medium components or selection needed for the cell line"],
- ["MYCOPLASM", "Cultivation", "Mycoplasm tested", DataType.CONTROLLEDVOCABULARY, "YES_NO", "Mycoplasm tested"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["CELL_LINE_NAME", "General", "Cell line name", DataType.VARCHAR, None, "Name of the cell line", None],
+ ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample", None],
+ ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number", None],
+ ["SPECIES", "Genotype", "Species", DataType.CONTROLLEDVOCABULARY, "SPECIES", "Species to which the cell line belongs", None],
+ ["CELL_TYPE", "Genotype", "Cell type", DataType.CONTROLLEDVOCABULARY, "CELL_TYPE", "Cell type of the cell line", None],
+ ["ORIGIN", "Origin", "Origin", DataType.CONTROLLEDVOCABULARY, "ORIGIN", "How the strain/cell line was produced", None],
+ ["CLONE_NO", "Origin", "Clone #", DataType.INTEGER, None, "Clone number", None],
+ ["CHECK", "Origin", "Check", DataType.CONTROLLEDVOCABULARY, "CHECK", "Check done to verify the modifications introduced in the cell line", None],
+ ["CREATION_DATE", "Origin", "Creation date", DataType.TIMESTAMP, None, "Creation date of the cell line", None],
+ ["MODIFICATION_DATE", "Origin", "Modification date", DataType.TIMESTAMP, None, "Modification date of the cell line", None],
+ ["FREEZING_DATE", "Origin", "Freezing date", DataType.TIMESTAMP, None, "Freezing date (if more than one, add the latest)", None],
+ ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab", None],
+ ["MEDIUM", "Cultivation", "Medium", DataType.CONTROLLEDVOCABULARY, "CELL_MEDIUM", "Medium used to cultivate or manipulate the cell line", None],
+ ["GROWTH_TEMP", "Cultivation", "Growth temp. ( °C)", DataType.INTEGER, None, "Growth temperature of the cell line", None],
+ ["CELL_CO2", "Cultivation", "% CO2", DataType.INTEGER, None, "Percentage of CO2 needed for the cultivation of the cell line", None],
+ ["SELECTION_MARKER", "Cultivation", "Selection marker", DataType.VARCHAR, None, "Special medium components or selection needed for the cell line", None],
+ ["MYCOPLASM", "Cultivation", "Mycoplasm tested", DataType.CONTROLLEDVOCABULARY, "YES_NO", "Mycoplasm tested", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("FLY", "", [
- ["FLY_STRAIN_NAME", "General", "Fly strain name", DataType.VARCHAR, None, "Fly strain name"],
- ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample"],
- ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number"],
- ["FLY_GENOTYPE", "Genotype", "Genotype", DataType.VARCHAR, None, "Genotype of the fly"],
- ["ASSOCIATED_GENE", "Genotype", "Associated gene", DataType.VARCHAR, None, "The transgene may contain regulatory or coding sequences from an endogenous gene"],
- ["MARKERS", "Genotype", "Markers", DataType.VARCHAR, None, "Markers available in the strain for further genetic modifications"],
- ["ORIGIN", "Origin", "Origin", DataType.CONTROLLEDVOCABULARY, "ORIGIN", "How the strain/cell line was produced"],
- ["STRAIN_CHECK", "Origin", "Strain Check", DataType.CONTROLLEDVOCABULARY, "CHECK", "Check done to verify the modifications introduced in the strain"],
- ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab"],
- ["MATING_PARTNERS", "Comments", "Mating partners", DataType.MULTILINE_VARCHAR, None, "Features needed for the mating partners"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["FLY_STRAIN_NAME", "General", "Fly strain name", DataType.VARCHAR, None, "Fly strain name", None],
+ ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample", None],
+ ["OWNER_NUMBER", "General", "Owner number", DataType.MULTILINE_VARCHAR, None, "Owner number", None],
+ ["FLY_GENOTYPE", "Genotype", "Genotype", DataType.VARCHAR, None, "Genotype of the fly", None],
+ ["ASSOCIATED_GENE", "Genotype", "Associated gene", DataType.VARCHAR, None, "The transgene may contain regulatory or coding sequences from an endogenous gene", None],
+ ["MARKERS", "Genotype", "Markers", DataType.VARCHAR, None, "Markers available in the strain for further genetic modifications", None],
+ ["ORIGIN", "Origin", "Origin", DataType.CONTROLLEDVOCABULARY, "ORIGIN", "How the strain/cell line was produced", None],
+ ["STRAIN_CHECK", "Origin", "Strain Check", DataType.CONTROLLEDVOCABULARY, "CHECK", "Check done to verify the modifications introduced in the strain", None],
+ ["SOURCE", "Origin", "Source", DataType.VARCHAR, None, "Source from where the construct/strain/cell line obtained or purchased, if it was not produced in the lab", None],
+ ["MATING_PARTNERS", "Comments", "Mating partners", DataType.MULTILINE_VARCHAR, None, "Features needed for the mating partners", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
addPropertiesToSamples([
@@ -619,11 +654,11 @@ addPropertiesToSamples([
"SOLUTION_BUFFER",
"RNA"
],[
- ["STORAGE_NAMES", "Physical Storage", "Storage Name", DataType.CONTROLLEDVOCABULARY, "STORAGE_NAMES", "Storage Name"],
- ["STORAGE_ROW", "Physical Storage", "Storage Row", DataType.INTEGER, None, "Storage Row"],
- ["STORAGE_COLUMN", "Physical Storage", "Storage Column", DataType.INTEGER, None, "Storage Column"],
- ["STORAGE_BOX_NAME", "Physical Storage", "Storage Box Name", DataType.VARCHAR, None, "Storage Box Name"],
- ["STORAGE_USER", "Physical Storage", "Storage User Id", DataType.VARCHAR, None, "Storage User Id"]
+ ["STORAGE_NAMES", "Physical Storage", "Storage Name", DataType.CONTROLLEDVOCABULARY, "STORAGE_NAMES", "Storage Name", None],
+ ["STORAGE_ROW", "Physical Storage", "Storage Row", DataType.INTEGER, None, "Storage Row", None],
+ ["STORAGE_COLUMN", "Physical Storage", "Storage Column", DataType.INTEGER, None, "Storage Column", None],
+ ["STORAGE_BOX_NAME", "Physical Storage", "Storage Box Name", DataType.VARCHAR, None, "Storage Box Name", None],
+ ["STORAGE_USER", "Physical Storage", "Storage User Id", DataType.VARCHAR, None, "Storage User Id", None]
]);
##
@@ -631,55 +666,55 @@ addPropertiesToSamples([
##
createSampleTypeWithProperties("EXPERIMENTAL_STEP", "", [
- ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name"],
- ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample"],
- ["EXPERIMENTAL_GOALS", "General", "Experimental goals", DataType.MULTILINE_VARCHAR, None, "Goal of the experiment"],
- ["EXPERIMENTAL_RESULTS", "General", "Experimental results", DataType.MULTILINE_VARCHAR, None, "Brief summary of the results obtained"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["EXPERIMENTAL_READOUT", "Readout details", "Experimental readout", DataType.CONTROLLEDVOCABULARY, "EXPERIMENTAL_READOUT", "Experimental readout used in the experiment"],
- ["MACHINE", "Readout details", "Machine", DataType.CONTROLLEDVOCABULARY, "MACHINE", "Machine used to perform the experiment"],
- ["FREEFORM_TABLE_STATE", "Readout details", "Freeform Table State", DataType.MULTILINE_VARCHAR, None, "Table describing how the order of samples measured in the experiments"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name", None],
+ ["OWNER", "General", "Owner", DataType.CONTROLLEDVOCABULARY, "OWNER", "Who produced/owned the sample", None],
+ ["EXPERIMENTAL_GOALS", "General", "Experimental goals", DataType.MULTILINE_VARCHAR, None, "Goal of the experiment", None],
+ ["EXPERIMENTAL_RESULTS", "General", "Experimental results", DataType.MULTILINE_VARCHAR, None, "Brief summary of the results obtained", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["EXPERIMENTAL_READOUT", "Readout details", "Experimental readout", DataType.CONTROLLEDVOCABULARY, "EXPERIMENTAL_READOUT", "Experimental readout used in the experiment", None],
+ ["MACHINE", "Readout details", "Machine", DataType.CONTROLLEDVOCABULARY, "MACHINE", "Machine used to perform the experiment", None],
+ ["FREEFORM_TABLE_STATE", "Readout details", "Freeform Table State", DataType.MULTILINE_VARCHAR, None, "Table describing how the order of samples measured in the experiments", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("GENERAL_PROTOCOL", "", [
- ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name"],
- ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab"],
- ["PROTOCOL_TYPE", "General", "Protocol type", DataType.CONTROLLEDVOCABULARY, "PROTOCOL_TYPE", "Category a protocol belongs"],
- ["MATERIALS", "Materials", "Materials", DataType.MULTILINE_VARCHAR, None, "Machines (and relative set up), special labware required for the protocol."],
- ["TIME_REQUIREMENT", "Method", "Time requirement", DataType.MULTILINE_VARCHAR, None, "Time required to complete a protocol"],
- ["PROCEDURE", "Method", "Procedure", DataType.MULTILINE_VARCHAR, None, "Procedure required by the protocol by points (1,2,3,...)"],
- ["PROTOCOL_EVALUATION", "Method", "Protocol evaluation", DataType.MULTILINE_VARCHAR, None, "Parameters and observations to meet the minimal efficiency of the protocol"],
- ["SUGGESTIONS", "Comments", "Suggestions", DataType.MULTILINE_VARCHAR, None, "Suggestions for the protocol"],
- ["PROTOCOL_MODIFICATIONS", "Comments", "Protocol modifications", DataType.MULTILINE_VARCHAR, None, "Alternative procedures used to make protocol variations"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name", None],
+ ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab", None],
+ ["PROTOCOL_TYPE", "General", "Protocol type", DataType.CONTROLLEDVOCABULARY, "PROTOCOL_TYPE", "Category a protocol belongs", None],
+ ["MATERIALS", "Materials", "Materials", DataType.MULTILINE_VARCHAR, None, "Machines (and relative set up), special labware required for the protocol.", None],
+ ["TIME_REQUIREMENT", "Method", "Time requirement", DataType.MULTILINE_VARCHAR, None, "Time required to complete a protocol", None],
+ ["PROCEDURE", "Method", "Procedure", DataType.MULTILINE_VARCHAR, None, "Procedure required by the protocol by points (1,2,3,...)", None],
+ ["PROTOCOL_EVALUATION", "Method", "Protocol evaluation", DataType.MULTILINE_VARCHAR, None, "Parameters and observations to meet the minimal efficiency of the protocol", None],
+ ["SUGGESTIONS", "Comments", "Suggestions", DataType.MULTILINE_VARCHAR, None, "Suggestions for the protocol", None],
+ ["PROTOCOL_MODIFICATIONS", "Comments", "Protocol modifications", DataType.MULTILINE_VARCHAR, None, "Alternative procedures used to make protocol variations", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("PCR_PROTOCOL", "", [
- ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name"],
- ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab"],
- ["TEMPLATE", "General", "Template", DataType.CONTROLLEDVOCABULARY, "TEMPLATE", "Type of template used in the PCR protocol"],
- ["REACTION_MIX", "Materials", "Reaction mix", DataType.MULTILINE_VARCHAR, None, "Reaction mix recipe for the PCR"],
- ["THERMOCYCLER_PROTOCOL", "Method", "Thermocycler protocol", DataType.MULTILINE_VARCHAR, None, "Thermocycler protocol for PCR"],
- ["PROTOCOL_EVALUATION", "Method", "Protocol evaluation", DataType.MULTILINE_VARCHAR, None, "Parameters and observations to meet the minimal efficiency of the protocol"],
- ["SUGGESTIONS", "Comments", "Suggestions", DataType.MULTILINE_VARCHAR, None, "Suggestions for the protocol"],
- ["PROTOCOL_MODIFICATIONS", "Comments", "Protocol modifications", DataType.MULTILINE_VARCHAR, None, "Alternative procedures used to make protocol variations"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name", None],
+ ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab", None],
+ ["TEMPLATE", "General", "Template", DataType.CONTROLLEDVOCABULARY, "TEMPLATE", "Type of template used in the PCR protocol", None],
+ ["REACTION_MIX", "Materials", "Reaction mix", DataType.MULTILINE_VARCHAR, None, "Reaction mix recipe for the PCR", None],
+ ["THERMOCYCLER_PROTOCOL", "Method", "Thermocycler protocol", DataType.MULTILINE_VARCHAR, None, "Thermocycler protocol for PCR", None],
+ ["PROTOCOL_EVALUATION", "Method", "Protocol evaluation", DataType.MULTILINE_VARCHAR, None, "Parameters and observations to meet the minimal efficiency of the protocol", None],
+ ["SUGGESTIONS", "Comments", "Suggestions", DataType.MULTILINE_VARCHAR, None, "Suggestions for the protocol", None],
+ ["PROTOCOL_MODIFICATIONS", "Comments", "Protocol modifications", DataType.MULTILINE_VARCHAR, None, "Alternative procedures used to make protocol variations", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
createSampleTypeWithProperties("WESTERN_BLOTTING_PROTOCOL", "", [
- ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name"],
- ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab"],
- ["STORAGE", "General", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product"],
- ["MEMBRANE", "Materials", "Membrane", DataType.CONTROLLEDVOCABULARY, "MEMBRANE", "Membrane used for western blotting"],
- ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer"],
- ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes"],
- ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users"],
- ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State"]
+ ["NAME", "General", "Name", DataType.MULTILINE_VARCHAR, None, "Name", None],
+ ["FOR_WHAT", "General", "For what", DataType.MULTILINE_VARCHAR, None, "For what kind of experimental application/readout this sample is used in the lab", None],
+ ["STORAGE", "General", "Storage", DataType.CONTROLLEDVOCABULARY, "STORAGE", "Storage conditions of the product", None],
+ ["MEMBRANE", "Materials", "Membrane", DataType.CONTROLLEDVOCABULARY, "MEMBRANE", "Membrane used for western blotting", None],
+ ["PUBLICATION", "Comments", "Publication", DataType.MULTILINE_VARCHAR, None, "Publication from where the information was first found OR technical sheet given by the manufacturer", None],
+ ["NOTES", "Comments", "Notes", DataType.MULTILINE_VARCHAR, None, "Notes", None],
+ ["XMLCOMMENTS", "Comments", "Comments List", DataType.XML, None, "Several comments can be added by different users", commentsScriptName],
+ ["ANNOTATIONS_STATE", "Comments", "Annotations State", DataType.XML, None, "Annotations State", annotationsScriptName]
]);
\ No newline at end of file
diff --git a/plasmid/source/core-plugins/newbrowser/1/compatibility/comments.py b/plasmid/source/core-plugins/newbrowser/1/compatibility/comments.py
new file mode 100644
index 00000000000..02c50d2364a
--- /dev/null
+++ b/plasmid/source/core-plugins/newbrowser/1/compatibility/comments.py
@@ -0,0 +1,174 @@
+from java.util import Date
+
+"""
+Example XML property value handled by this script:
+<root>
+ <commentEntry date="2011-02-20 14:15:28 GMT+01:00" person="buczekp">Here is the 1st entry text.<commentEntry>
+ <commentEntry date="2011-02-20 14:16:28 GMT+01:00" person="kohleman">Here is the 2nd entry text - a warning!<commentEntry>
+ <commentEntry date="2011-02-20 14:17:28 GMT+01:00" person="tpylak">Here is the 3rd entry text - an error!!!<commentEntry>
+ <commentEntry date="2011-02-20 14:18:28 GMT+01:00" person="brinn">Here is the 4th entry text - an error!!!<commentEntry>
+ <commentEntry date="2011-02-20 14:19:28 GMT+01:00" person="felmer">Here is the 5th entry text - a warning!<commentEntry>
+</root>
+"""
+
+COMMENT_ENTRY_ELEMENT_LABEL = 'commentEntry'
+
+""" labels of table columns and corresponding input fields """
+DATE_LABEL = 'Date'
+PERSON_LABEL = 'Person'
+COMMENT_TEXT_LABEL = 'Comment Text'
+
+""" names of attributes of XML elements for comment entries """
+DATE_ATTRIBUTE = 'date'
+PERSON_ATTRIBUTE = 'person'
+
+""" action labels (shown as button labels in UI) """
+ADD_ACTION_LABEL = 'Add Comment Entry'
+EDIT_ACTION_LABEL = 'Edit'
+DELETE_ACTION_LABEL = 'Delete'
+
+
+def configureUI():
+ """Create table builder and add headers of columns."""
+ builder = createTableBuilder()
+ builder.addHeader(DATE_LABEL, 250) # date and comment text values are long, override default width (150)
+ builder.addHeader(PERSON_LABEL)
+ builder.addHeader(COMMENT_TEXT_LABEL, 400)
+
+ """
+ Extract XML elements from property value to a Python list.
+ For each element (comment entry) add add a row to the table.
+ """
+ elements = list(propertyConverter().convertToElements(property))
+ for commentEntry in elements:
+ row = builder.addRow()
+ row.setCell(DATE_LABEL, Date(long(commentEntry.getAttribute(DATE_ATTRIBUTE))))
+ row.setCell(PERSON_LABEL, commentEntry.getAttribute(PERSON_ATTRIBUTE))
+ row.setCell(COMMENT_TEXT_LABEL, commentEntry.getData())
+
+ """Specify that the property should be shown in a tab and set the table output."""
+ property.setOwnTab(True)
+ uiDescription = property.getUiDescription()
+ uiDescription.useTableOutput(builder.getTableModel())
+
+ """
+ Define and add actions with input fields used to:
+ 1. specify attributes of new comment entry,
+ """
+ addAction = uiDescription.addTableAction(ADD_ACTION_LABEL)\
+ .setDescription('Add a new comment entry:')
+ widgets = [
+ inputWidgetFactory().createMultilineTextInputField(COMMENT_TEXT_LABEL)\
+ .setMandatory(True)
+ ]
+ addAction.addInputWidgets(widgets)
+
+ """
+ 2. modify attributes of a selected comment entry,
+ """
+ editAction = uiDescription.addTableAction(EDIT_ACTION_LABEL)\
+ .setDescription('Edit selected comment entry:')
+ # Exactly 1 row needs to be selected to enable action.
+ editAction.setRowSelectionRequiredSingle()
+ widgets = [
+ inputWidgetFactory().createMultilineTextInputField(COMMENT_TEXT_LABEL).setMandatory(True)
+ ]
+ editAction.addInputWidgets(widgets)
+ # Bind field name with column name.
+ editAction.addBinding(COMMENT_TEXT_LABEL, COMMENT_TEXT_LABEL)
+
+ """
+ 3. delete selected comment entries.
+ """
+ deleteAction = uiDescription.addTableAction(DELETE_ACTION_LABEL)\
+ .setDescription('Are you sure you want to delete selected comment entry?')
+ # Delete is enabled when at least 1 row is selected.
+ deleteAction.setRowSelectionRequired()
+
+
+def updateFromUI(action):
+ """Extract list of elements from old value of the property."""
+ converter = propertyConverter()
+ elements = list(converter.convertToElements(property))
+
+ """Implement behaviour of user actions."""
+ if action.name == ADD_ACTION_LABEL:
+ """
+ For 'add' action create new comment entry element with values from input fields
+ and add it to existing elements.
+ """
+ element = elementFactory().createElement(COMMENT_ENTRY_ELEMENT_LABEL)
+ """Fill element attributes with appropriate values."""
+ element.addAttribute(DATE_ATTRIBUTE, str(Date().getTime())) # current date
+ element.addAttribute(PERSON_ATTRIBUTE, action.getPerson().getUserId()) # invoker the action
+ """Retrieve values from input fields filled by user on the client side."""
+
+ """Set comment text as a text element, not an attribute."""
+ element.setData(action.getInputValue(COMMENT_TEXT_LABEL))
+ """Add the new entry to the end of the element list."""
+ elements.append(element)
+ elif action.name == EDIT_ACTION_LABEL:
+ """
+ For 'edit' action find the comment entry element corresponding to selected row
+ and replace it with an element with values from input fields.
+ """
+
+ selectedRowId = action.getSelectedRows()[0]
+ xmlUser = elements[selectedRowId].getAttribute(PERSON_ATTRIBUTE)
+ if action.getPerson().getUserId() == xmlUser:
+ elements[selectedRowId].setData(action.getInputValue(COMMENT_TEXT_LABEL))
+ else:
+ raise ValidationException('Comment creator and current user differ:\n' + str(xmlUser) + "!=" + str(action.getPerson().getUserId()) )
+ elif action.name == DELETE_ACTION_LABEL:
+ """
+ For 'delete' action delete the entries that correspond to selected rows.
+ NOTE: As many rows can be deleted at once it is easier to delete them in reversed order.
+ """
+ rowIds = list(action.getSelectedRows())
+ rowIds.reverse()
+ for rowId in rowIds:
+ xmlUser = elements[rowId].getAttribute(PERSON_ATTRIBUTE)
+ if action.getPerson().getUserId() == xmlUser:
+ elements.pop(rowId)
+ else:
+ raise ValidationException('Comment creator and current user differ:\n' + str(xmlUser) + "!=" + str(action.getPerson().getUserId()) )
+ else:
+ raise ValidationException('action not supported')
+
+ """Update value of the managed property to XML string created from modified list of elements."""
+ property.value = converter.convertToString(elements)
+
+def _createCommentEntry(comment_text_list):
+ #if comment_text_list is not None:
+ commentEntry = elementFactory().createElement(COMMENT_ENTRY_ELEMENT_LABEL)
+
+ commentEntry.addAttribute(PERSON_ATTRIBUTE, person.getUserId())
+ commentEntry.addAttribute(DATE_ATTRIBUTE,str(Date().getTime()))
+ commentEntry.setData(comment_text_list)
+ return commentEntry
+
+def showRawValueInForms():
+ return False
+
+def batchColumnNames():
+ return [COMMENT_ENTRY_ELEMENT_LABEL]
+
+def updateFromRegistrationForm(bindings):
+ elements = []
+ for item in bindings:
+ comment_text_list = item.get('COMMENTENTRY')
+ sampleLink = _createCommentEntry(comment_text_list)
+ elements.append(sampleLink)
+
+ property.value = propertyConverter().convertToString(elements)
+
+
+
+
+def updateFromBatchInput(bindings):
+ elements = []
+ input = bindings.get('')
+ if input is not None:
+ commentEntry = _createCommentEntry(input)
+ elements.append(commentEntry)
+ property.value = propertyConverter().convertToString(elements)
diff --git a/plasmid/source/core-plugins/newbrowser/1/compatibility/managed.py b/plasmid/source/core-plugins/newbrowser/1/compatibility/managed.py
index 118c87ffec6..eb26c1d5b52 100644
--- a/plasmid/source/core-plugins/newbrowser/1/compatibility/managed.py
+++ b/plasmid/source/core-plugins/newbrowser/1/compatibility/managed.py
@@ -3,13 +3,16 @@ from ch.systemsx.cisd.openbis.generic.server import CommonServiceProvider
# Configuration
# This needs to be edited for each sample type to match the Profile.js ANNOTATION_PROPERTIES map.
configuration = {}
-configuration["PROTEIN"] = { "PHOSPHO" : True, "ISOTYPE" : False }
+#configuration["CHEMICAL"] = { "QUANTITY" : False, "COMMENTS" : False }
#Global Variables
server = CommonServiceProvider.getCommonServer()
contextOrNull = server.tryToAuthenticateAsSystem()
propertyTypes = server.listPropertyTypes(contextOrNull.getSessionToken(), False)
-
+
+##
+## Help Methods
+##
def getPropertyType(propertyTypeCode):
print "Searching property type: " + propertyTypeCode
for propertyType in propertyTypes:
@@ -39,6 +42,12 @@ def getWidgetForAdd(sampleTypeCode):
widgets.append(widget)
return widgets;
+def isValid(dataType, value):
+ print "isValid"
+ return True
+##
+## Help Methods
+##
def configureUI():
print "All property types: " + str(propertyTypes)
# Add Headers
@@ -71,10 +80,6 @@ def configureUI():
.setDescription('Are you sure you want to delete selected annotation?')
deleteAction.setRowSelectionRequired() # Delete is enabled when at least 1 row is selected.
-def isValid(dataType, value):
- print "isValid"
- return True
-
def updateFromUI(action):
converter = propertyConverter()
elements = list(converter.convertToElements(property))
--
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