diff --git a/integration-tests/test-screening.sh b/integration-tests/test-screening.sh index e26999230f529065902e6989e98ab8cdf4489d53..7c91b6b34e7932eaca0657732e4d8133e234eeff 100755 --- a/integration-tests/test-screening.sh +++ b/integration-tests/test-screening.sh @@ -30,13 +30,15 @@ API_HCS=$WORK/screening_api # Prepare template incoming data and some destination data structures function prepare_data_first_phase { rm -fr $DSS_INCOMING_PARENT_DIR/incoming* - unzip $DATA_TEMPLATE -d $DSS_INCOMING_PARENT_DIR -x incoming-analysis-genedata/* + unzip $DATA_TEMPLATE -d $DSS_INCOMING_PARENT_DIR -x incoming-analysis*/* mkdir -p $DSS_INCOMING_PARENT_DIR/incoming-analysis-genedata + mkdir -p $DSS_INCOMING_PARENT_DIR/incoming-analysis chmod -R 700 $DSS_INCOMING_PARENT_DIR/incoming* } function prepare_data_second_phase { unzip $DATA_TEMPLATE -d $DSS_INCOMING_PARENT_DIR incoming-analysis-genedata/* + unzip $DATA_TEMPLATE -d $DSS_INCOMING_PARENT_DIR incoming-analysis/* chmod -R 700 $DSS_INCOMING_PARENT_DIR/incoming* }