diff --git a/deep_sequencing_unit/source/Jython/createSampleSheet_bcl2fastq.py b/deep_sequencing_unit/source/Jython/createSampleSheet_bcl2fastq.py
index bb9c2eb3d63f2799f4924bd76388f9821d5a93e0..ecebfb2db2b5939823a324ae0105516bf0f37742 100644
--- a/deep_sequencing_unit/source/Jython/createSampleSheet_bcl2fastq.py
+++ b/deep_sequencing_unit/source/Jython/createSampleSheet_bcl2fastq.py
@@ -688,7 +688,7 @@ def create_sample_sheet_dict(service, barcodesPerLaneDict, containedSamples, sam
               
                 line = separator.join([lane_string + key,
                                     key + '_' + sanitize_string(lane_sample_properties[key][config_dict['externalSampleName']]) + '_' + index1[0:len_index1] + '_' + index2[0:len_index2],
-                                    "", "","", index1[0:len_index1], indexNumber, index2_processed, key, ""])
+                                    "", "","", index1[0:len_index1],"", index2_processed, key, ""])
                 sampleSheetDict[lane_int + '_' + key] = [line]
 
             else:
diff --git a/deep_sequencing_unit/source/Jython/createSampleSheet_bcl2fastq_Test.py b/deep_sequencing_unit/source/Jython/createSampleSheet_bcl2fastq_Test.py
index 1b9336d5a8da3dce5b4c9c4826221d2c7f361d77..772faceddad1a221ff11a3e305a2a875a1a0930e 100644
--- a/deep_sequencing_unit/source/Jython/createSampleSheet_bcl2fastq_Test.py
+++ b/deep_sequencing_unit/source/Jython/createSampleSheet_bcl2fastq_Test.py
@@ -229,10 +229,10 @@ class create_sample_sheet_C7P5KANXX(unittest.TestCase):
                                                                                       self.index2Vocabulary, self.flowCellName, self.logger)
          
         self.assertDictEqual(self.ordered_sample_sheet_dict,
-             {u'8_BSSE_QGF_36781_C7P5KANXX_8': [u'8,BSSE_QGF_36781_C7P5KANXX_8,BSSE_QGF_36781_C7P5KANXX_8_Ribomethseq_mousecerebellum_comparison_CTTGTAA_NOINDEX,,,,CTTGTAA,(NoIndex),NOINDEX,BSSE_QGF_36781_C7P5KANXX_8,'],
-              u'8_BSSE_QGF_36780_C7P5KANXX_8': [u'8,BSSE_QGF_36780_C7P5KANXX_8,BSSE_QGF_36780_C7P5KANXX_8_Ribomethseq_HEK_comparison_GCCAATA_NOINDEX,,,,GCCAATA,(NoIndex),NOINDEX,BSSE_QGF_36780_C7P5KANXX_8,'], 
-              u'8_BSSE_QGF_36552_C7P5KANXX_8': [u'8,BSSE_QGF_36552_C7P5KANXX_8,BSSE_QGF_36552_C7P5KANXX_8_CLIP_444_1_TGACCAA_NOINDEX,,,,TGACCAA,(NoIndex),NOINDEX,BSSE_QGF_36552_C7P5KANXX_8,'], 
-              u'8_BSSE_QGF_36779_C7P5KANXX_8': [u'8,BSSE_QGF_36779_C7P5KANXX_8,BSSE_QGF_36779_C7P5KANXX_8_HITS_CLIP_Fibrillarin_mouseNeurons_2_CAGATCA_NOINDEX,,,,CAGATCA,(NoIndex),NOINDEX,BSSE_QGF_36779_C7P5KANXX_8,']})
+             {u'8_BSSE_QGF_36781_C7P5KANXX_8': [u'8,BSSE_QGF_36781_C7P5KANXX_8,BSSE_QGF_36781_C7P5KANXX_8_Ribomethseq_mousecerebellum_comparison_CTTGTAA_NOINDEX,,,,CTTGTAA,,NOINDEX,BSSE_QGF_36781_C7P5KANXX_8,'],
+              u'8_BSSE_QGF_36780_C7P5KANXX_8': [u'8,BSSE_QGF_36780_C7P5KANXX_8,BSSE_QGF_36780_C7P5KANXX_8_Ribomethseq_HEK_comparison_GCCAATA_NOINDEX,,,,GCCAATA,,NOINDEX,BSSE_QGF_36780_C7P5KANXX_8,'], 
+              u'8_BSSE_QGF_36552_C7P5KANXX_8': [u'8,BSSE_QGF_36552_C7P5KANXX_8,BSSE_QGF_36552_C7P5KANXX_8_CLIP_444_1_TGACCAA_NOINDEX,,,,TGACCAA,,NOINDEX,BSSE_QGF_36552_C7P5KANXX_8,'], 
+              u'8_BSSE_QGF_36779_C7P5KANXX_8': [u'8,BSSE_QGF_36779_C7P5KANXX_8,BSSE_QGF_36779_C7P5KANXX_8_HITS_CLIP_Fibrillarin_mouseNeurons_2_CAGATCA_NOINDEX,,,,CAGATCA,,NOINDEX,BSSE_QGF_36779_C7P5KANXX_8,']})
  
           
     def test_create_header_section(self):