From 7bbc7108d60ce7767a36d3e62f6f3091060e8fb5 Mon Sep 17 00:00:00 2001
From: barillac <barillac>
Date: Fri, 14 Aug 2015 11:31:53 +0000
Subject: [PATCH] small fix
SVN: 34454
---
.../add_plasmid_parents/add_plasmid_parents.py | 15 ++++++++++++++-
1 file changed, 14 insertions(+), 1 deletion(-)
diff --git a/plasmid/source/core-plugins/weismigration/1/dss/drop-boxes/add_plasmid_parents/add_plasmid_parents.py b/plasmid/source/core-plugins/weismigration/1/dss/drop-boxes/add_plasmid_parents/add_plasmid_parents.py
index 5e26ec13d1e..9f1ff5e9027 100644
--- a/plasmid/source/core-plugins/weismigration/1/dss/drop-boxes/add_plasmid_parents/add_plasmid_parents.py
+++ b/plasmid/source/core-plugins/weismigration/1/dss/drop-boxes/add_plasmid_parents/add_plasmid_parents.py
@@ -103,11 +103,13 @@ def update_sample_with_parents(tr, sample_dict):
sample_for_update.setParentSampleIdentifiers(plasmid_list)
elif re.search ("pKW001", name):
plasmid_parent_id = "/MATERIALS/"+name.replace("pKW001","PKW1").strip()
- print "P3 : ", plasmid_parent_id
if not parents_code_list ==['']:
parents_code_list.append(plasmid_parent_id)
print "P3 : ", parents_code_list
sample_for_update.setParentSampleIdentifiers(parents_code_list)
+ else:
+ plasmid_list.append(plasmid_parent_id)
+ sample_for_update.setParentSampleIdentifiers(plasmid_list)
elif re.search ("PKW001", name):
plasmid_parent_id = "/MATERIALS/"+name.replace("PKW001","PKW1").strip()
print "P3 : ", plasmid_parent_id
@@ -130,6 +132,17 @@ def update_sample_with_parents(tr, sample_dict):
plasmid_list.append(plasmid_parent_id)
print "P2 : ", plasmid_list
sample_for_update.setParentSampleIdentifiers(plasmid_list)
+ elif re.search ("pkw", name):
+ plasmid_parent_id = "/MATERIALS/"+name.replace("pkw","PKW").strip()
+ print "P2 : ", plasmid_parent_id
+ if not parents_code_list ==['']:
+ parents_code_list.append(plasmid_parent_id)
+ print "P2 : ", parents_code_list
+ sample_for_update.setParentSampleIdentifiers(parents_code_list)
+ else:
+ plasmid_list.append(plasmid_parent_id)
+ print "P2 : ", plasmid_list
+ sample_for_update.setParentSampleIdentifiers(plasmid_list)
#=================================================================================================
# for name in plasmid_parent_code_split:
--
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