From 7431a4f1e459b31fd4d27425fa512331e55544ac Mon Sep 17 00:00:00 2001
From: izabel <izabel>
Date: Tue, 7 Sep 2010 12:28:08 +0000
Subject: [PATCH] [LMS-1715] fill 'experiment description'
SVN: 17745
---
.../etl/biozentrum/BZDataSetInfoExtractor.java | 17 +++++++++++++++++
.../shared/basic/dto/ScreeningConstants.java | 2 ++
2 files changed, 19 insertions(+)
diff --git a/screening/source/java/ch/systemsx/cisd/openbis/dss/etl/biozentrum/BZDataSetInfoExtractor.java b/screening/source/java/ch/systemsx/cisd/openbis/dss/etl/biozentrum/BZDataSetInfoExtractor.java
index ed1ced149cf..74e5b065849 100644
--- a/screening/source/java/ch/systemsx/cisd/openbis/dss/etl/biozentrum/BZDataSetInfoExtractor.java
+++ b/screening/source/java/ch/systemsx/cisd/openbis/dss/etl/biozentrum/BZDataSetInfoExtractor.java
@@ -36,6 +36,7 @@ import ch.systemsx.cisd.openbis.dss.generic.shared.dto.DataSetInformation;
import ch.systemsx.cisd.openbis.generic.shared.basic.dto.DataType;
import ch.systemsx.cisd.openbis.generic.shared.basic.dto.DataTypeCode;
import ch.systemsx.cisd.openbis.generic.shared.basic.dto.Experiment;
+import ch.systemsx.cisd.openbis.generic.shared.basic.dto.GenericValueEntityProperty;
import ch.systemsx.cisd.openbis.generic.shared.basic.dto.IEntityProperty;
import ch.systemsx.cisd.openbis.generic.shared.basic.dto.NewExperiment;
import ch.systemsx.cisd.openbis.generic.shared.basic.dto.NewSample;
@@ -172,12 +173,28 @@ public class BZDataSetInfoExtractor implements IDataSetInfoExtractor
return sampleProperties.toArray(new IEntityProperty[sampleProperties.size()]);
}
+ private static IEntityProperty[] createDescriptionProperty(String description)
+ {
+ List<IEntityProperty> properties = new ArrayList<IEntityProperty>();
+ GenericValueEntityProperty property = new GenericValueEntityProperty();
+ property.setValue(description);
+ PropertyType propertyType = new PropertyType();
+ DataType dataType = new DataType();
+ dataType.setCode(DataTypeCode.VARCHAR);
+ propertyType.setDataType(dataType);
+ propertyType.setCode(ScreeningConstants.DESCRIPTION);
+ property.setPropertyType(propertyType);
+ properties.add(property);
+ return properties.toArray(new IEntityProperty[properties.size()]);
+ }
+
private static void registerExperiment(IEncapsulatedOpenBISService openbisService,
ExperimentIdentifier experimentIdentifier)
{
NewExperiment experiment = new NewExperiment();
experiment.setExperimentTypeCode(ScreeningConstants.SIRNA_HCS);
experiment.setIdentifier(experimentIdentifier.toString());
+ experiment.setProperties(createDescriptionProperty("-"));
openbisService.registerExperiment(experiment);
}
diff --git a/screening/source/java/ch/systemsx/cisd/openbis/plugin/screening/shared/basic/dto/ScreeningConstants.java b/screening/source/java/ch/systemsx/cisd/openbis/plugin/screening/shared/basic/dto/ScreeningConstants.java
index 8bde1830459..52183b16dc0 100644
--- a/screening/source/java/ch/systemsx/cisd/openbis/plugin/screening/shared/basic/dto/ScreeningConstants.java
+++ b/screening/source/java/ch/systemsx/cisd/openbis/plugin/screening/shared/basic/dto/ScreeningConstants.java
@@ -64,6 +64,8 @@ public class ScreeningConstants
// code of plate geometry vocabulary
public static final String PLATE_GEOMETRY = "$PLATE_GEOMETRY";
+ public static final String DESCRIPTION = "DESCRIPTION";
+
public static final String IMAGE_DATASET_PLUGIN_TYPE_CODE = IMAGE_DATASET_TYPE;
// ---- required DSS servlets
--
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