diff --git a/openbis_all/.classpath b/openbis_all/.classpath
index 6673ab05f8d3710fb7abd69982812e6d00e9bd4e..fc3c377fffab56afa41b7ff824f00ae65bebcb6b 100644
--- a/openbis_all/.classpath
+++ b/openbis_all/.classpath
@@ -16,7 +16,5 @@
 	<classpathentry combineaccessrules="false" kind="src" path="/screening"/>
 	<classpathentry combineaccessrules="false" kind="src" path="/rtd_cina"/>
 	<classpathentry combineaccessrules="false" kind="src" path="/plasmid"/>
-	<classpathentry kind="lib" path="/libraries/hdf5"/>
-	<classpathentry kind="lib" path="/libraries/nativedata"/>
 	<classpathentry kind="output" path="targets/classes"/>
 </classpath>