diff --git a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/AbstractTest.java b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/AbstractTest.java index d63a7bc206932a43afefa721d02dcb748267ba5c..be3b44ea7323c83def3de38278c17d53b9468696 100644 --- a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/AbstractTest.java +++ b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/AbstractTest.java @@ -712,15 +712,19 @@ public class AbstractTest extends SystemTestCase return codes; } - protected List<String> extractVocabularyCodes(List<PropertyAssignment> propertyAssignments) { - List<String> codes = new ArrayList<>(); - if(propertyAssignments != null) { - for(PropertyAssignment propertyAssignment : propertyAssignments) { - if(propertyAssignment.getVocabulary() != null) { - codes.add(propertyAssignment.getVocabulary().getCode()); - } + protected List<String> extractVocabularyCodes(List<PropertyAssignment> propertyAssignments) + { + List<String> codes = new ArrayList<>(); + if (propertyAssignments != null) + { + for (PropertyAssignment propertyAssignment : propertyAssignments) + { + if (propertyAssignment.getVocabulary() != null) + { + codes.add(propertyAssignment.getVocabulary().getCode()); } - } + } + } return codes; } diff --git a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchDataSetTypeTest.java b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchDataSetTypeTest.java index 1b6c372e3244e600000c397b2ac4aa11849a67a3..7bcaffda1d0ee9e5baf56a875d6cb105ae2d8454 100644 --- a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchDataSetTypeTest.java +++ b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchDataSetTypeTest.java @@ -111,8 +111,9 @@ public class SearchDataSetTypeTest extends AbstractTest + "HCS_IMAGE_ANALYSIS_DATA:, LINK_TYPE:, REQUIRES_EXPERIMENT:, UNKNOWN:, " + "VALIDATED_CONTAINER_TYPE:, VALIDATED_IMPOSSIBLE_TO_UPDATE_TYPE:, VALIDATED_NORMAL_TYPE:]"); List<String> vocabularyCodes = new ArrayList<String>(); - for(DataSetType type:types) { - vocabularyCodes.addAll(extractVocabularyCodes(type.getPropertyAssignments())); + for (DataSetType type : types) + { + vocabularyCodes.addAll(extractVocabularyCodes(type.getPropertyAssignments())); } Collections.sort(vocabularyCodes); assertEquals(vocabularyCodes.toString(), "[GENDER, ORGANISM, ORGANISM]"); diff --git a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchExperimentTypeTest.java b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchExperimentTypeTest.java index e16afac5ec175fd86206f59cb905f03fa9cad9ee..b6827e9f5f46332c0c67a53c52ec0244daeae8d8 100644 --- a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchExperimentTypeTest.java +++ b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchExperimentTypeTest.java @@ -52,8 +52,9 @@ public class SearchExperimentTypeTest extends AbstractTest assertEquals(types.get(0).getFetchOptions().hasPropertyAssignments(), true); List<String> vocabularyCodes = new ArrayList<String>(); - for(ExperimentType type:types) { - vocabularyCodes.addAll(extractVocabularyCodes(type.getPropertyAssignments())); + for (ExperimentType type : types) + { + vocabularyCodes.addAll(extractVocabularyCodes(type.getPropertyAssignments())); } Collections.sort(vocabularyCodes); assertEquals(vocabularyCodes.toString(), "[GENDER, ORGANISM]"); diff --git a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchMaterialTypeTest.java b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchMaterialTypeTest.java index 3b20d42d92dd88747d694776ae99085213ac3280..2da05866204ab42389ba266ef56e8db4164e6f3a 100644 --- a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchMaterialTypeTest.java +++ b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchMaterialTypeTest.java @@ -48,16 +48,18 @@ public class SearchMaterialTypeTest extends AbstractTest List<MaterialType> types = searchResult.getObjects(); List<String> codes = extractCodes(types); Collections.sort(codes); - assertEquals(codes.toString(), "[BACTERIUM, CELL_LINE, COMPOUND, CONTROL, DELETION_TEST, GENE, OTHER_REF, SELF_REF, SIRNA, SLOW_GENE, VIRUS]"); + assertEquals(codes.toString(), + "[BACTERIUM, CELL_LINE, COMPOUND, CONTROL, DELETION_TEST, GENE, OTHER_REF, SELF_REF, SIRNA, SLOW_GENE, VIRUS]"); assertEquals(types.get(0).getFetchOptions().hasPropertyAssignments(), true); - + List<String> vocabularyCodes = new ArrayList<String>(); - for(MaterialType type:types) { - vocabularyCodes.addAll(extractVocabularyCodes(type.getPropertyAssignments())); + for (MaterialType type : types) + { + vocabularyCodes.addAll(extractVocabularyCodes(type.getPropertyAssignments())); } Collections.sort(vocabularyCodes); assertEquals(vocabularyCodes.toString(), "[ORGANISM, ORGANISM]"); - + v3api.logout(sessionToken); } diff --git a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchSampleTypeTest.java b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchSampleTypeTest.java index f6b75c368a13af848460d1ad5437f6d3a469ff89..0c0e9f1cc79045a42f235c04e82e3cff655cedb1 100644 --- a/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchSampleTypeTest.java +++ b/openbis/sourceTest/java/ch/ethz/sis/openbis/systemtest/asapi/v3/SearchSampleTypeTest.java @@ -48,15 +48,16 @@ public class SearchSampleTypeTest extends AbstractTest List<SampleType> types = searchResult.getObjects(); List<String> codes = extractCodes(types); - + List<String> vocabularyCodes = new ArrayList<String>(); - for(SampleType type:types) { - vocabularyCodes.addAll(extractVocabularyCodes(type.getPropertyAssignments())); + for (SampleType type : types) + { + vocabularyCodes.addAll(extractVocabularyCodes(type.getPropertyAssignments())); } - + Collections.sort(vocabularyCodes); assertEquals( - vocabularyCodes.toString(), + vocabularyCodes.toString(), "[$PLATE_GEOMETRY, $PLATE_GEOMETRY, ORGANISM, ORGANISM, TEST_VOCABULARY]"); Collections.sort(codes); assertEquals(