From 641f037387c331d31424ca4e69f6b5a76b57a7a4 Mon Sep 17 00:00:00 2001
From: juanf <juanf>
Date: Thu, 31 Mar 2016 14:26:11 +0000
Subject: [PATCH] Load on demand openBIS V1 API from correct URL
SVN: 36055
---
.../1/as/webapps/eln-lims/html/index.html | 128 +-
.../html/lib/openbis/js/v1/openbis.js | 2337 -----------------
.../html/lib/openbis/uploader/config.json | 1 -
.../lib/openbis/uploader/css/src/upload.css | 292 --
.../html/lib/openbis/uploader/img/favicon.gif | Bin 225 -> 0 bytes
.../lib/openbis/uploader/img/pause-button.png | Bin 172 -> 0 bytes
.../lib/openbis/uploader/img/play-button.png | Bin 305 -> 0 bytes
.../lib/openbis/uploader/img/stop-button.png | Bin 176 -> 0 bytes
.../lib/openbis/uploader/img/upload-icon.png | Bin 3037 -> 0 bytes
.../html/lib/openbis/uploader/index.html | 57 -
.../lib/openbis/uploader/js/src/upload.js | 441 ----
.../html/lib/openbis/uploader/version.txt | 1 -
12 files changed, 73 insertions(+), 3184 deletions(-)
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/js/v1/openbis.js
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/config.json
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/css/src/upload.css
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/favicon.gif
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/pause-button.png
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/play-button.png
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/stop-button.png
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/upload-icon.png
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/index.html
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/js/src/upload.js
delete mode 100644 openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/version.txt
diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/index.html b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/index.html
index 4b822da2032..241975e4b74 100644
--- a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/index.html
+++ b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/index.html
@@ -68,7 +68,6 @@
<script type="text/javascript" src="./lib/caja-HTML-sanitizer/js/sanitizer.js"></script>
<!-- First party libraries -->
- <script type="text/javascript" src="./lib/openbis/js/v1/openbis.js"></script>
<script type="text/javascript" src="./lib/openbis/js/v3/config.js"></script>
<script type="text/javascript" src="./lib/openbis/js/v3/require.js"></script>
<script type="text/javascript" src="./lib/grid/js/Grid.js"></script>
@@ -209,20 +208,31 @@
<script type="text/javascript" src="./js/views/ExperimentTable/ExperimentTableView.js"></script>
<script type="text/javascript">
- //
- // Configurations Available (Available under the js/config folder)
- // Use StandardProfile as a standard default for new installations.
- // Use ExampleProfile as a start point to develop new profiles.
- //
-
- //<PROFILE_PLACEHOLDER>
- var profile = new StandardProfile();
- //</PROFILE_PLACEHOLDER>
//
// Global variables
//
- var mainController = new MainController(profile);
+ var profile = null;
+ var mainController = null;
+
+ var loadJSResorce = function(pathToResource, onLoad) {
+ //Dinamically load openBIS V1 libraries
+ var fullURL = window.location.href;
+ var indexOfWebapp = fullURL.indexOf('webapp');
+ var openBISURL = fullURL.substring(0,indexOfWebapp);
+
+ var head= document.getElementsByTagName('head')[0];
+ var script= document.createElement('script');
+ script.type= 'text/javascript';
+ var src = openBISURL + pathToResource;
+ script.src= src;
+ script.onreadystatechange= function () {
+ if (this.readyState == 'complete') onLoad();
+ }
+ script.onload = onLoad;
+
+ head.appendChild(script);
+ }
//
// Global links handler - This function avoid normal link behaviour for javascript enabled links that will use ajax calls for left clicks, allowing to open them on a new tab with right click.
@@ -240,54 +250,63 @@
// Application Startup
//
$(document).ready(function() {
- $(document).ajaxError(function( event, jqxhr, settings, thrownError ) {
- try {
- Util.showError("AJAX Error status: " + jqxhr.status + " - Status text: " + jqxhr.statusText + " - Calling: " + settings.url + " - With Data: " + settings.data);
- } catch(err) {
- Util.showError("Unknown AJAX Error");
+ //Dinamically load openBIS V1 libraries
+ loadJSResorce("resources/js/openbis.js", function() {
+ //<PROFILE_PLACEHOLDER>
+ profile = new StandardProfile();
+ //</PROFILE_PLACEHOLDER>
+
+ mainController = new MainController(profile);
+
+ $(document).ajaxError(function( event, jqxhr, settings, thrownError ) {
+ try {
+ Util.showError("AJAX Error status: " + jqxhr.status + " - Status text: " + jqxhr.statusText + " - Calling: " + settings.url + " - With Data: " + settings.data);
+ } catch(err) {
+ Util.showError("Unknown AJAX Error");
+ }
+ });
+
+ $('#main').hide();
+ var username = $("#username").value;
+ if(username == null || username.length==0) {
+ $("#username").focus();
+ } else {
+ $("#login-button").focus();
}
- });
- $('#main').hide();
- var username = $("#username").value;
- if(username == null || username.length==0) {
- $("#username").focus();
- } else {
- $("#login-button").focus();
- }
-
- $('#login-form').submit(function() {
- Util.blockUI();
- var username = $('#username').val();
- var password = $('#password').val();
+ $('#login-form').submit(function() {
+ Util.blockUI();
+ var username = $('#username').val();
+ var password = $('#password').val();
+
+ mainController.serverFacade.login(
+ $.trim($('#username').val()),
+ $.trim($('#password').val()),
+ function(data) { mainController.enterApp(data, username, password) });
+ });
- mainController.serverFacade.login(
- $.trim($('#username').val()),
- $.trim($('#password').val()),
- function(data) { mainController.enterApp(data, username, password) });
- });
-
- mainController.serverFacade.ifRestoredSessionActive(function(data) { mainController.enterApp(data) });
-
- // Make the ENTER key the default button
- $("login-form input").keypress(function (e) {
- if ((e.which && e.which == 13) || (e.keyCode && e.keyCode == 13)) {
- $('button[type=submit].default').click();
- return false;
- } else {
- return true;
+ mainController.serverFacade.ifRestoredSessionActive(function(data) { mainController.enterApp(data) });
+
+ // Make the ENTER key the default button
+ $("login-form input").keypress(function (e) {
+ if ((e.which && e.which == 13) || (e.keyCode && e.keyCode == 13)) {
+ $('button[type=submit].default').click();
+ return false;
+ } else {
+ return true;
+ }
+ });
+
+ //Automatic login if special parameters are given
+ var queryString = Util.queryString();
+ var user = queryString.user;
+ var pass = queryString.pass;
+ if(user && pass) {
+ Util.blockUI();
+ mainController.serverFacade.login(user, pass, function(data) { mainController.enterApp(data) });
}
});
- //Automatic login if special parameters are given
- var queryString = Util.queryString();
- var user = queryString.user;
- var pass = queryString.pass;
- if(user && pass) {
- Util.blockUI();
- mainController.serverFacade.login(user, pass, function(data) { mainController.enterApp(data) });
- }
-
//Resize the menu on drag
var dragContainerFunc = function(e) {
var menu = $('#sideMenu');
@@ -306,9 +325,8 @@
axis: "x",
drag: dragContainerFunc
});
-
- dragContainerFunc({ pageX : (window.outerWidth * 0.20) });
+ dragContainerFunc({ pageX : (window.outerWidth * 0.20) });
});
</script>
</head>
diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/js/v1/openbis.js b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/js/v1/openbis.js
deleted file mode 100644
index 66528c31135..00000000000
--- a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/js/v1/openbis.js
+++ /dev/null
@@ -1,2337 +0,0 @@
-/**
- * =============================================
- * OpenBIS facade internal code (DO NOT USE!!!)
- * =============================================
- */
-
-if(typeof $ == 'undefined'){
- alert('Loading of openbis.js failed - jquery.js is missing');
-}
-
-function _openbisInternal(openbisUrlOrNull){
- this.init(openbisUrlOrNull);
-}
-
-_openbisInternal.prototype.init = function(openbisUrlOrNull){
- this.openbisUrl = this.normalizeOpenbisUrl(openbisUrlOrNull);
- this.generalInfoServiceUrl = this.openbisUrl + "/rmi-general-information-v1.json";
- this.generalInfoChangingServiceUrl = this.openbisUrl + "/rmi-general-information-changing-v1.json";
- this.queryServiceUrl = this.openbisUrl + "/rmi-query-v1.json";
- this.webInfoServiceUrl = this.openbisUrl + "/rmi-web-information-v1.json"
-}
-
-_openbisInternal.prototype.log = function(msg){
- if(console){
- console.log(msg);
- }
-}
-
-_openbisInternal.prototype.normalizeOpenbisUrl = function(openbisUrlOrNull){
- var parts = this.parseUri(window.location);
-
- if(openbisUrlOrNull){
- var openbisParts = this.parseUri(openbisUrlOrNull);
-
- for(openbisPartName in openbisParts){
- var openbisPartValue = openbisParts[openbisPartName];
-
- if(openbisPartValue){
- parts[openbisPartName] = openbisPartValue;
- }
- }
- }
-
- return parts.protocol + "://" + parts.authority + "/openbis/openbis";
-}
-
-_openbisInternal.prototype.jsonRequestData = function(params) {
- params["id"] = "1";
- params["jsonrpc"] = "2.0";
- return JSON.stringify(params)
-}
-
-_openbisInternal.prototype.ajaxRequest = function(settings) {
- settings.type = "POST";
- settings.processData = false;
- settings.dataType = "json";
- settings.jsonp = false;
- settings.data = this.jsonRequestData(settings.data);
- settings.success = this.ajaxRequestSuccess(settings.success);
- // we call the same settings.success function for backward compatibility
- settings.error = this.ajaxRequestError(settings.success);
- $.ajax(settings)
-}
-
-_openbisInternal.prototype.responseInterceptor = function(response, action) {
- action(response);
-}
-
-_openbisInternal.prototype.ajaxRequestSuccess = function(action){
- var openbisObj = this;
- return function(response){
- if(response.error){
- openbisObj.log("Request failed: " + JSON.stringify(response.error));
- }
-
- openbisObj.responseInterceptor(response, function() {
- if(action){
- action(response);
- }
- });
- };
-}
-
-_openbisInternal.prototype.ajaxRequestError = function(action){
- var openbisObj = this;
- return function(xhr, status, error){
- openbisObj.log("Request failed: " + error);
- if(action){
- action({
- "error" : "Request failed: " + error
- });
- }
- };
-}
-
-// Functions for working with cookies (see http://www.quirksmode.org/js/cookies.html)
-
-_openbisInternal.prototype.createCookie = function(name,value,days) {
- if (days) {
- var date = new Date();
- date.setTime(date.getTime()+(days*24*60*60*1000));
- var expires = "; expires="+date.toGMTString();
- }
- else var expires = "";
- document.cookie = name+"="+value+expires+"; path=/";
-}
-
-_openbisInternal.prototype.readCookie = function(name) {
- var nameEQ = name + "=";
- var ca = document.cookie.split(';');
- for(var i=0;i < ca.length;i++) {
- var c = ca[i];
- while (c.charAt(0)==' ') c = c.substring(1,c.length);
- if (c.indexOf(nameEQ) == 0) return c.substring(nameEQ.length,c.length);
- }
- return null;
-}
-
-_openbisInternal.prototype.eraseCookie = function(name) {
- this.createCookie(name,"",-1);
-}
-
-// parseUri 1.2.2 (c) Steven Levithan <stevenlevithan.com> MIT License (see http://blog.stevenlevithan.com/archives/parseuri)
-
-_openbisInternal.prototype.parseUri = function(str) {
- var options = {
- strictMode: false,
- key: ["source","protocol","authority","userInfo","user","password","host","port","relative","path","directory","file","query","anchor"],
- q: {
- name: "queryKey",
- parser: /(?:^|&)([^&=]*)=?([^&]*)/g
- },
- parser: {
- strict: /^(?:([^:\/?#]+):)?(?:\/\/((?:(([^:@]*)(?::([^:@]*))?)?@)?([^:\/?#]*)(?::(\d*))?))?((((?:[^?#\/]*\/)*)([^?#]*))(?:\?([^#]*))?(?:#(.*))?)/,
- loose: /^(?:(?![^:@]+:[^:@\/]*@)([^:\/?#.]+):)?(?:\/\/)?((?:(([^:@]*)(?::([^:@]*))?)?@)?([^:\/?#]*)(?::(\d*))?)(((\/(?:[^?#](?![^?#\/]*\.[^?#\/.]+(?:[?#]|$)))*\/?)?([^?#\/]*))(?:\?([^#]*))?(?:#(.*))?)/
- }
- };
-
- var o = options,
- m = o.parser[o.strictMode ? "strict" : "loose"].exec(str),
- uri = {},
- i = 14;
-
- while (i--) uri[o.key[i]] = m[i] || "";
-
- uri[o.q.name] = {};
- uri[o.key[12]].replace(o.q.parser, function ($0, $1, $2) {
- if ($1) uri[o.q.name][$1] = $2;
- });
-
- return uri;
-}
-
-_openbisInternal.prototype.listDataStores = function(action){
- this.ajaxRequest({
- url: this.generalInfoServiceUrl,
- data: { "method" : "listDataStores",
- "params" : [ this.sessionToken ]
- },
- success: action
- });
-}
-
-_openbisInternal.prototype.initDataStores = function(action){
- var openbisInternal = this;
-
- if(typeof this.dataStores === "undefined"){
- this.listDataStores(function(response){
- if(response.result){
- openbisInternal.dataStores = response.result;
- }else{
- openbisInternal.dataStores = [];
- }
- action();
- });
- }else{
- action();
- }
-}
-
-_openbisInternal.prototype.getDataStoreUrlForDataStoreCode = function(dataStoreCodeOrNull, action) {
- var openbisInternal = this;
-
- this.initDataStores(function(){
- if(openbisInternal.dataStores.length == 0){
- throw "Couldn't get a data store url as there are no data stores configured.";
- }else{
- if(dataStoreCodeOrNull){
- var dataStoreUrl = null;
- $.each(openbisInternal.dataStores, function(index, dataStore){
- if(dataStore.code == dataStoreCodeOrNull){
- dataStoreUrl = dataStore.downloadUrl;
- }
- });
- if(dataStoreUrl){
- action(dataStoreUrl);
- }else{
- throw "Couldn't get a data store url because data store with " + dataStoreCodeOrNull + " code does not exist.";
- }
- }else{
- if(openbisInternal.dataStores.length == 1){
- action(openbisInternal.dataStores[0].downloadUrl);
- }else{
- throw "There is more than one data store configured. Please specify a data store code to get a data store url.";
- }
- }
- }
- });
-}
-
-_openbisInternal.prototype.getDataStoreUrlForDataSetCode = function(dataSetCode, action) {
- var openbisInternal = this;
-
- this.initDataStores(function(){
- if(openbisInternal.dataStores.length == 0){
- throw "Couldn't get a data store url as there are no data stores configured.";
- }else if(openbisInternal.dataStores.length == 1){
- action(openbisInternal.dataStores[0].downloadUrl);
- }else{
- openbisInternal.ajaxRequest({
- url: openbisInternal.generalInfoServiceUrl,
- data: { "method" : "tryGetDataStoreBaseURL",
- "params" : [ openbisInternal.sessionToken, dataSetCode ]
- },
- success: function(response){
- var hostUrl = response.result;
-
- if(hostUrl){
- action(hostUrl + "/datastore_server");
- }else{
- throw "Couldn't get a data store url for a data set with " + dataSetCode + " code because the data set does not exist.";
- }
- }
- });
- }
- });
-}
-
-_openbisInternal.prototype.getDataStoreApiUrlForDataStoreCode = function(dataStoreCodeOrNull, action) {
- this.getDataStoreUrlForDataStoreCode(dataStoreCodeOrNull, function(dataStoreUrl){
- action(dataStoreUrl + "/rmi-dss-api-v1.json");
- });
-}
-
-_openbisInternal.prototype.getDataStoreApiUrlForDataSetCode = function(dataSetCode, action) {
- this.getDataStoreUrlForDataSetCode(dataSetCode, function(dataStoreUrl){
- action(dataStoreUrl + "/rmi-dss-api-v1.json");
- });
-}
-
-_openbisInternal.prototype.getDataStoreHostForDataStoreCode = function(dataStoreCodeOrNull, action) {
- var openbisObj = this;
-
- this.getDataStoreUrlForDataStoreCode(dataStoreCodeOrNull, function(dataStoreUrl){
- var parts = openbisObj.parseUri(dataStoreUrl);
- action(parts.protocol + "://" + parts.authority);
- });
-}
-
-/**
- * ===============
- * OpenBIS facade
- * ===============
- *
- * The facade provides access to the following services:
- *
- * - ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService
- * - ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationChangingService
- * - ch.systemsx.cisd.openbis.plugin.query.shared.api.v1.IQueryApiServer
- * - ch.systemsx.cisd.openbis.generic.shared.api.v1.IWebInformationService
- * - ch.systemsx.cisd.openbis.dss.generic.shared.api.v1.IDssServiceRpcGeneric
- *
- * @class
- *
- */
-
-function openbis(openbisUrlOrNull) {
- this._internal = new _openbisInternal(openbisUrlOrNull);
-}
-
-/**
- * Intercepts responses so clients can handle generic errors like session timeouts with a
- * single handler.
- *
- * @method
- */
-openbis.prototype.setResponseInterceptor = function(responseInterceptor) {
- this._internal.responseInterceptor = responseInterceptor;
-}
-
-/**
- * ==================================================================================
- * ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationService methods
- * ==================================================================================
- */
-
-/**
- * Log into openBIS.
- *
- * @see IGeneralInformationService.tryToAuthenticateForAllServices(String, String)
- * @method
- */
-openbis.prototype.login = function(userId, userPassword, action) {
- var openbisObj = this
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "tryToAuthenticateForAllServices",
- "params" : [ userId, userPassword ]
- },
- success:
- function(loginResponse) {
- if(loginResponse.error){
- alert("Login failed");
- }else{
- openbisObj._internal.sessionToken = loginResponse.result;
- openbisObj.rememberSession();
- }
- openbisObj._internal.initDataStores(function(){
- action(loginResponse);
- });
- }
- });
-}
-
-/**
- * Stores the current session in a cookie.
- *
- * @method
- */
-openbis.prototype.rememberSession = function() {
- this._internal.createCookie('openbis', this.getSession(), 1);
-}
-
-/**
- * Removes the current session from a cookie.
- *
- * @method
- */
-openbis.prototype.forgetSession = function() {
- this._internal.eraseCookie('openbis');
-}
-
-/**
- * Restores the current session from a cookie.
- *
- * @method
- */
-openbis.prototype.restoreSession = function() {
- this._internal.sessionToken = this._internal.readCookie('openbis');
-}
-
-/**
- * Sets the current session.
- *
- * @method
- */
-openbis.prototype.useSession = function(sessionToken){
- this._internal.sessionToken = sessionToken;
-}
-
-/**
- * Returns the current session.
- *
- * @method
- */
-openbis.prototype.getSession = function(){
- return this._internal.sessionToken;
-}
-
-/**
- * Checks whether the current session is still active.
- *
- * @see IGeneralInformationService.isSessionActive(String)
- * @method
- */
-openbis.prototype.isSessionActive = function(action) {
- if(this.getSession()){
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "isSessionActive",
- "params" : [ this.getSession() ]
- },
- success: action
- });
- }else{
- action({ result : false })
- }
-}
-
-/**
- * Restores the current session from a cookie and executes
- * the specified action if the session is still active.
- *
- * @see restoreSession()
- * @see isSessionActive()
- * @method
- */
-openbis.prototype.ifRestoredSessionActive = function(action) {
- this.restoreSession();
- this.isSessionActive(function(data) { if (data.result) action(data) });
-}
-
-/**
- * Log out of openBIS.
- *
- * @see IGeneralInformationService.logout(String)
- * @method
- */
-openbis.prototype.logout = function(action) {
- this.forgetSession();
-
- if(this.getSession()){
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "logout",
- "params" : [ this.getSession() ]
- },
- success: action
- });
- }else if(action){
- action({ result : null });
- }
-}
-
-/**
- * @see IGeneralInformationService.listNamedRoleSets(String)
- * @method
- */
-openbis.prototype.listNamedRoleSets = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listNamedRoleSets",
- "params" : [ this.getSession() ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listSpacesWithProjectsAndRoleAssignments(String, String)
- * @method
- */
-openbis.prototype.listSpacesWithProjectsAndRoleAssignments = function(databaseInstanceCodeOrNull, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listSpacesWithProjectsAndRoleAssignments",
- "params" : [ this.getSession(), databaseInstanceCodeOrNull ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.searchForSamples(String, SearchCriteria)
- * @method
- */
-openbis.prototype.searchForSamples = function(searchCriteria, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "searchForSamples",
- "params" : [ this.getSession(),
- searchCriteria ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.searchForSamples(String, SearchCriteria, EnumSet<SampleFetchOption>)
- * @method
- */
-openbis.prototype.searchForSamplesWithFetchOptions = function(searchCriteria, fetchOptions, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: {
- "method" : "searchForSamples",
- "params" : [
- this.getSession(),
- searchCriteria,
- fetchOptions ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.searchForSamplesOnBehalfOfUser(String, SearchCriteria, EnumSet<SampleFetchOption>, String)
- * @method
- */
-openbis.prototype.searchForSamplesOnBehalfOfUser = function(searchCriteria, fetchOptions, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: {
- "method" : "searchForSamplesOnBehalfOfUser",
- "params" : [
- this.getSession(),
- searchCriteria,
- fetchOptions,
- userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.filterSamplesVisibleToUser(String, List<Sample>, String)
- * @method
- */
-openbis.prototype.filterSamplesVisibleToUser = function(allSamples, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: {
- "method" : "filterSamplesVisibleToUser",
- "params" : [
- this.getSession(),
- allSamples,
- userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listSamplesForExperiment(String, String)
- * @method
- */
-openbis.prototype.listSamplesForExperiment = function(experimentIdentifier, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listSamplesForExperiment",
- "params" : [ this.getSession(), experimentIdentifier ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listSamplesForExperimentOnBehalfOfUser(String, String, String)
- * @method
- */
-openbis.prototype.listSamplesForExperimentOnBehalfOfUser = function(experimentIdentifier, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listSamplesForExperimentOnBehalfOfUser",
- "params" : [ this.getSession(), experimentIdentifier, userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listDataSets(String, List<Sample>)
- * @method
- */
-openbis.prototype.listDataSetsForSamples = function(samples, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listDataSets",
- "params" : [ this.getSession(), samples ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listExperiments(String, List<Project>, String)
- * @method
- */
-openbis.prototype.listExperiments = function(projects, experimentType, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listExperiments",
- "params" : [ this.getSession(), projects, experimentType ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listExperimentsHavingSamples(String, List<Project>, String)
- * @method
- */
-openbis.prototype.listExperimentsHavingSamples = function(projects, experimentType, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listExperimentsHavingSamples",
- "params" : [ this.getSession(), projects, experimentType ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listExperimentsHavingDataSets(String, List<Project>, String)
- * @method
- */
-openbis.prototype.listExperimentsHavingDataSets = function(projects, experimentType, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listExperimentsHavingDataSets",
- "params" : [ this.getSession(), projects, experimentType ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.filterExperimentsVisibleToUser(String, List<Experiment>, String)
- * @method
- */
-openbis.prototype.filterExperimentsVisibleToUser = function(allExperiments, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "filterExperimentsVisibleToUser",
- "params" : [ this.getSession(), allExperiments, userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listDataSetsForSample(String, Sample, boolean)
- * @method
- */
-openbis.prototype.listDataSetsForSample = function(sample, restrictToDirectlyConnected, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listDataSetsForSample",
- "params" : [ this.getSession(), sample, restrictToDirectlyConnected ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listDataStores(String)
- * @method
- */
-openbis.prototype.listDataStores = function(action) {
- this._internal.listDataStores(action);
-}
-
-/**
- * @see IGeneralInformationService.getDefaultPutDataStoreBaseURL(String)
- * @method
- */
-openbis.prototype.getDefaultPutDataStoreBaseURL = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "getDefaultPutDataStoreBaseURL",
- "params" : [ this.getSession() ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.tryGetDataStoreBaseURL(String)
- * @method
- */
-openbis.prototype.tryGetDataStoreBaseURL = function(dataSetCode, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "tryGetDataStoreBaseURL",
- "params" : [ this.getSession(), dataSetCode ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.getDataStoreBaseURLs(String, List<String>)
- * @method
- */
-openbis.prototype.getDataStoreBaseURLs = function(dataSetCodes, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "getDataStoreBaseURLs",
- "params" : [ this.getSession(), dataSetCodes ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listDataSetTypes(String)
- * @method
- */
-openbis.prototype.listDataSetTypes = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listDataSetTypes",
- "params" : [ this.getSession() ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listSampleTypes(String)
- * @method
- */
-openbis.prototype.listSampleTypes = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listSampleTypes",
- "params" : [ this.getSession() ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listExperimentTypes(String)
- * @method
- */
-openbis.prototype.listExperimentTypes = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listExperimentTypes",
- "params" : [ this.getSession() ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listVocabularies(String)
- * @method
- */
-openbis.prototype.listVocabularies = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listVocabularies",
- "params" : [ this.getSession() ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listPropertyTypes(String, boolean withRelations)
- * @method
- */
-openbis.prototype.listPropertyTypes = function(withRelations, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listPropertyTypes",
- "params" : [ this.getSession() , withRelations]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.generateCode(String, String prefix, EntityKind entityKind);
- * @method
- */
-openbis.prototype.generateCode = function(prefix, entityKind, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "generateCode",
- "params" : [ this.getSession() , prefix, entityKind]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listDataSets(String, List<Sample>, EnumSet<Connections>)
- * @method
- */
-openbis.prototype.listDataSetsForSamplesWithConnections = function(samples, connectionsToGet, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listDataSets",
- "params" : [ this.getSession(), samples, connectionsToGet ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listDataSetsOnBehalfOfUser(String, List<Sample>, EnumSet<Connections>, String)
- * @method
- */
-openbis.prototype.listDataSetsForSamplesOnBehalfOfUser = function(samples, connectionsToGet, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listDataSetsOnBehalfOfUser",
- "params" : [ this.getSession(), samples, connectionsToGet, userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listDataSetsForExperiments(String, List<Experiment>, EnumSet<Connections>)
- * @method
- */
-openbis.prototype.listDataSetsForExperiments = function(experiments, connectionsToGet, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listDataSetsForExperiments",
- "params" : [ this.getSession(), experiments, connectionsToGet ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listDataSetsForExperimentsOnBehalfOfUser(String, List<Experiment>, EnumSet<Connections>, String)
- * @method
- */
-openbis.prototype.listDataSetsForExperimentsOnBehalfOfUser = function(experiments, connectionsToGet, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listDataSetsForExperimentsOnBehalfOfUser",
- "params" : [ this.getSession(), experiments, connectionsToGet, userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.getDataSetMetaData(String, List<String>)
- * @method
- */
-openbis.prototype.getDataSetMetaData = function(dataSetCodes, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "getDataSetMetaData",
- "params" : [ this.getSession(), dataSetCodes ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.getDataSetMetaData(String, List<String>, EnumSet<DataSetFetchOption>)
- * @method
- */
-openbis.prototype.getDataSetMetaDataWithFetchOptions = function(dataSetCodes, fetchOptions, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "getDataSetMetaData",
- "params" : [ this.getSession(), dataSetCodes, fetchOptions ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.searchForDataSets(String, SearchCriteria)
- * @method
- */
-openbis.prototype.searchForDataSets = function(searchCriteria, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "searchForDataSets",
- "params" : [ this.getSession(),
- searchCriteria ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.searchForDataSetsOnBehalfOfUser(String, SearchCriteria, String)
- * @method
- */
-openbis.prototype.searchForDataSetsOnBehalfOfUser = function(searchCriteria, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "searchForDataSetsOnBehalfOfUser",
- "params" : [ this.getSession(),
- searchCriteria,
- userId ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.searchOnSearchDomain(String, String, String, Map<String, String>)
- * @method
- */
-openbis.prototype.searchOnSearchDomain = function(preferredSearchDomainOrNull, searchString, optionalParametersOrNull, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "searchOnSearchDomain",
- "params" : [ this.getSession(),
- preferredSearchDomainOrNull,
- searchString, optionalParametersOrNull ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listAvailableSearchDomains(String)
- * @method
- */
-openbis.prototype.listAvailableSearchDomains = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listAvailableSearchDomains",
- "params" : [ this.getSession()] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.filterDataSetsVisibleToUser(String, List<DataSet>, String)
- * @method
- */
-openbis.prototype.filterDataSetsVisibleToUser = function(allDataSets, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "filterDataSetsVisibleToUser",
- "params" : [ this.getSession(),
- allDataSets,
- userId ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listExperiments(String, List<String>)
- * @method
- */
-openbis.prototype.listExperimentsForIdentifiers = function(experimentIdentifiers, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listExperiments",
- "params" : [ this.getSession(),
- experimentIdentifiers ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.searchForExperiments(String, SearchCriteria)
- * @method
- */
-openbis.prototype.searchForExperiments = function(searchCriteria, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "searchForExperiments",
- "params" : [ this.getSession(),
- searchCriteria ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listProjects(String)
- * @method
- */
-openbis.prototype.listProjects = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listProjects",
- "params" : [ this.getSession() ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listProjectsOnBehalfOfUser(String, String)
- * @method
- */
-openbis.prototype.listProjectsOnBehalfOfUser = function(userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listProjectsOnBehalfOfUser",
- "params" : [ this.getSession(), userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.getMaterialByCodes(String, List<MaterialIdentifier>)
- * @method
- */
-openbis.prototype.getMaterialByCodes = function(materialIdentifiers, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "getMaterialByCodes",
- "params" : [ this.getSession(), materialIdentifiers ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.searchForMaterials(String, SearchCriteria)
- * @method
- */
-openbis.prototype.searchForMaterials = function(searchCriteria, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "searchForMaterials",
- "params" : [ this.getSession(), searchCriteria ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listMetaprojects(String)
- * @method
- */
-openbis.prototype.listMetaprojects = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listMetaprojects",
- "params" : [ this.getSession() ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listMetaprojectsOnBehalfOfUser(String, String)
- * @method
- */
-openbis.prototype.listMetaprojectsOnBehalfOfUser = function(userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listMetaprojectsOnBehalfOfUser",
- "params" : [ this.getSession(), userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.getMetaproject(String, IMetaprojectId)
- * @method
- */
-openbis.prototype.getMetaproject = function(metaprojectId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "getMetaproject",
- "params" : [ this.getSession(), metaprojectId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.getMetaprojectOnBehalfOfUser(String, IMetaprojectId, String)
- * @method
- */
-openbis.prototype.getMetaprojectOnBehalfOfUser = function(metaprojectId, userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "getMetaprojectOnBehalfOfUser",
- "params" : [ this.getSession(), metaprojectId, userId ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listAttachmentsForProject(String, IProjectId, boolean)
- * @method
- */
-openbis.prototype.listAttachmentsForProject = function(projectId, allVersions, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listAttachmentsForProject",
- "params" : [ this.getSession(), projectId, allVersions ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listAttachmentsForExperiment(String, IExperimentId, boolean)
- * @method
- */
-openbis.prototype.listAttachmentsForExperiment = function(experimentId, allVersions, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listAttachmentsForExperiment",
- "params" : [ this.getSession(), experimentId, allVersions ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationService.listAttachmentsForSample(String, ISampleId, boolean)
- * @method
- */
-openbis.prototype.listAttachmentsForSample = function(sampleId, allVersions, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listAttachmentsForSample",
- "params" : [ this.getSession(), sampleId, allVersions ]
- },
- success: action
- });
-}
-
-
-/**
- * @see GeneralInformationService.getUserDisplaySettings(String)
- * @method
- */
-openbis.prototype.getUserDisplaySettings = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "getUserDisplaySettings",
- "params" : [ this.getSession()] },
- success: action
- });
-}
-
-/**
- * @see GeneralInformationService.listDeletions(String, EnumSet<DeletionFetchOption>)
- * @method
- */
-openbis.prototype.listDeletions = function(fetchOptions, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listDeletions",
- "params" : [ this.getSession(),
- fetchOptions ] },
- success: action
- });
-}
-
-/**
- * @see GeneralInformationService.listPersons(String)
- * @method
- */
-openbis.prototype.listPersons = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "listPersons",
- "params" : [ this.getSession() ] },
- success: action
- });
-}
-
-/**
- * @see GeneralInformationService.countNumberOfSamplesForType(String, String)
- * @method
- */
-openbis.prototype.countNumberOfSamplesForType = function(sampleTypeCode, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoServiceUrl,
- data: { "method" : "countNumberOfSamplesForType",
- "params" : [ this.getSession(),
- sampleTypeCode ] },
- success: action
- });
-}
-
-/**
- * ==========================================================================================
- * ch.systemsx.cisd.openbis.generic.shared.api.v1.IGeneralInformationChangingService methods
- * ==========================================================================================
- */
-
-/**
- * @see IGeneralInformationChangingService.updateSampleProperties(String, long, Map<String,String>)
- * @method
- */
-openbis.prototype.updateSampleProperties = function(sampleId, properties, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "updateSampleProperties",
- "params" : [ this.getSession(), sampleId, properties ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.addUnofficialVocabularyTerm(String, Long, NewVocabularyTerm)
- * @method
- */
-openbis.prototype.addUnofficialVocabularyTerm = function(vocabularyId, term, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "addUnofficialVocabularyTerm",
- "params" : [ this.getSession(), vocabularyId, term ]
- },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.getWebAppSettings(String, String)
- * @method
- */
-openbis.prototype.getWebAppSettings = function(webappId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "getWebAppSettings",
- params : [ this.getSession(), webappId ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.setWebAppSettings(String, WebAppSettings)
- * @method
- */
-openbis.prototype.setWebAppSettings = function(webappSettings, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "setWebAppSettings",
- params : [ this.getSession(), webappSettings ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.createMetaproject(String, String, String)
- * @method
- */
-openbis.prototype.createMetaproject = function(name, descriptionOrNull, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "createMetaproject",
- params : [ this.getSession(), name, descriptionOrNull ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.updateMetaproject(String, IMetaprojectId, String, String)
- * @method
- */
-openbis.prototype.updateMetaproject = function(metaprojectId, name, descriptionOrNull, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "updateMetaproject",
- params : [ this.getSession(), metaprojectId, name, descriptionOrNull ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.deleteMetaproject(String, IMetaprojectId)
- * @method
- */
-openbis.prototype.deleteMetaproject = function(metaprojectId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "deleteMetaproject",
- params : [ this.getSession(), metaprojectId ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.addToMetaproject(String, IMetaprojectId, MetaprojectAssignmentsIds)
- * @method
- */
-openbis.prototype.addToMetaproject = function(metaprojectId, assignmentsToAdd, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "addToMetaproject",
- params : [ this.getSession(), metaprojectId, assignmentsToAdd ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.removeFromMetaproject(String, IMetaprojectId, MetaprojectAssignmentsIds)
- * @method
- */
-openbis.prototype.removeFromMetaproject = function(metaprojectId, assignmentsToRemove, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "removeFromMetaproject",
- params : [ this.getSession(), metaprojectId, assignmentsToRemove ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.registerSamples(String, String, String, String)
- * @method
- */
-openbis.prototype.registerSamples = function(sampleTypeCode, sessionKey, defaultGroupIdentifier, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "registerSamples",
- "params" : [ this.getSession(),
- sampleTypeCode,
- sessionKey,
- defaultGroupIdentifier] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.updateSamples(String, String, String, String)
- * @method
- */
-openbis.prototype.updateSamples = function(sampleTypeCode, sessionKey, defaultGroupIdentifier, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "updateSamples",
- "params" : [ this.getSession(),
- sampleTypeCode,
- sessionKey,
- defaultGroupIdentifier] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.uploadedSamplesInfo(String, String, String)
- * @method
- */
-openbis.prototype.uploadedSamplesInfo = function(sampleTypeCode, sessionKey, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "uploadedSamplesInfo",
- "params" : [ this.getSession(),
- sampleTypeCode,
- sessionKey] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.deleteProjects(String, List<Long>, String)
- * @method
- */
-openbis.prototype.deleteProjects = function(projectIds, reason, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "deleteProjects",
- "params" : [ this.getSession(),
- projectIds,
- reason] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.deleteExperiments(String, List<Long>, String, DeletionType)
- * @method
- */
-openbis.prototype.deleteExperiments = function(experimentIds, reason, deletionType, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "deleteExperiments",
- "params" : [ this.getSession(),
- experimentIds,
- reason,
- deletionType ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.deleteSamples(String, List<Long>, String, DeletionType)
- * @method
- */
-openbis.prototype.deleteSamples = function(sampleIds, reason, deletionType, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "deleteSamples",
- "params" : [ this.getSession(),
- sampleIds,
- reason,
- deletionType ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.deleteDataSets(String, List<String>, String, DeletionType)
- * @method
- */
-openbis.prototype.deleteDataSets = function(dataSetCodes, reason, deletionType, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "deleteDataSets",
- "params" : [ this.getSession(),
- dataSetCodes,
- reason,
- deletionType ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.deleteDataSetsForced(String, List<String>, String, DeletionType)
- * @method
- */
-openbis.prototype.deleteDataSetsForced = function(dataSetCodes, reason, deletionType, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "deleteDataSetsForced",
- "params" : [ this.getSession(),
- dataSetCodes,
- reason,
- deletionType ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.revertDeletions(String, List<Long>)
- * @method
- */
-openbis.prototype.revertDeletions = function(deletionIds, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "revertDeletions",
- "params" : [ this.getSession(),
- deletionIds ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.deletePermanently(String, List<Long>)
- * @method
- */
-openbis.prototype.deletePermanently = function(deletionIds, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "deletePermanently",
- "params" : [ this.getSession(),
- deletionIds ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.deletePermanentlyForced(String, List<Long>)
- * @method
- */
-openbis.prototype.deletePermanentlyForced = function(deletionIds, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "deletePermanentlyForced",
- "params" : [ this.getSession(),
- deletionIds ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.registerPerson(String, String)
- * @method
- */
-openbis.prototype.registerPerson = function(userId, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "registerPerson",
- "params" : [ this.getSession(),
- userId ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.registerSpace(String, String, String)
- * @method
- */
-openbis.prototype.registerSpace = function(spaceCode, spaceDescription, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "registerSpace",
- "params" : [ this.getSession(),
- spaceCode,
- spaceDescription ] },
- success: action
- });
-}
-
-/**
- * @see IGeneralInformationChangingService.registerPersonSpaceRole(String, String, String, String)
- * @method
- */
-openbis.prototype.registerPersonSpaceRole = function(spaceCode, userID, roleCode, action) {
- this._internal.ajaxRequest({
- url: this._internal.generalInfoChangingServiceUrl,
- data: { "method" : "registerPersonSpaceRole",
- "params" : [ this.getSession(),
- spaceCode,
- userID,
- roleCode ] },
- success: action
- });
-}
-
-/**
- * ============================================================================
- * ch.systemsx.cisd.openbis.plugin.query.shared.api.v1.IQueryApiServer methods
- * ============================================================================
- */
-
-/**
- * @see IQueryApiServer.listQueries(String)
- * @method
- */
-openbis.prototype.listQueries = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.queryServiceUrl,
- data: { "method" : "listQueries",
- "params" : [ this.getSession() ] },
- success: action
- });
-}
-
-/**
- * @see IQueryApiServer.executeQuery(String, long, Map<String, String>)
- * @method
- */
-openbis.prototype.executeQuery = function(queryId, parameterBindings, action) {
- this._internal.ajaxRequest({
- url: this._internal.queryServiceUrl,
- data: { "method" : "executeQuery",
- "params" : [ this.getSession(), queryId, parameterBindings ] },
- success: action
- });
-}
-
-/**
- * @see IQueryApiServer.listTableReportDescriptions(String)
- * @method
- */
-openbis.prototype.listTableReportDescriptions = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.queryServiceUrl,
- data: { "method" : "listTableReportDescriptions",
- "params" : [ this.getSession() ] },
- success: action
- });
-}
-
-/**
- * @see IQueryApiServer.createReportFromDataSets(String, String, String, List<String>)
- * @method
- */
-openbis.prototype.createReportFromDataSets = function(dataStoreCode, serviceKey, dataSetCodes, action) {
- this._internal.ajaxRequest({
- url: this._internal.queryServiceUrl,
- data: { "method" : "createReportFromDataSets",
- params : [ this.getSession(), dataStoreCode, serviceKey, dataSetCodes ] },
- success: action
- });
-}
-
-/**
- * @see IQueryApiServer.listAggregationServices(String)
- * @method
- */
-openbis.prototype.listAggregationServices = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.queryServiceUrl,
- data: { "method" : "listAggregationServices",
- params : [ this.getSession() ] },
- success: action
- });
-}
-
-/**
- * @see IQueryApiServer.createReportFromAggregationService(String, String, String, Map<String, Object>)
- * @method
- */
-openbis.prototype.createReportFromAggregationService = function(dataStoreCode, serviceKey, parameters, action) {
- this._internal.ajaxRequest({
- url: this._internal.queryServiceUrl,
- data: { "method" : "createReportFromAggregationService",
- params : [ this.getSession(), dataStoreCode, serviceKey, parameters ] },
- success: action
- });
-}
-
-
-/**
- * ==============================================================================
- * ch.systemsx.cisd.openbis.generic.shared.api.v1.IWebInformationService methods
- * ==============================================================================
- */
-
-/**
- * Returns the current server side session.
- *
- * @see IWebInformationService.getSessionToken()
- * @method
- */
-openbis.prototype.getSessionTokenFromServer = function(action) {
- this._internal.ajaxRequest({
- url: this._internal.webInfoServiceUrl,
- data: { "method" : "getSessionToken" },
- success: action
- });
-}
-
-/**
- * =================================================================================
- * ch.systemsx.cisd.openbis.dss.generic.shared.api.v1.IDssServiceRpcGeneric methods
- * =================================================================================
- */
-
-/**
- * @see IDssServiceRpcGeneric.listFilesForDataSet(String, DataSetFileDTO)
- * @method
- */
-openbis.prototype.listFilesForDataSetFile = function(fileOrFolder, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(fileOrFolder.dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "listFilesForDataSet",
- "params" : [ openbisObj.getSession(), fileOrFolder ] },
- success: action
- });
- });
-}
-
-/**
- * @see IDssServiceRpcGeneric.getDownloadUrlForFileForDataSet(String, DataSetFileDTO)
- * @method
- */
-openbis.prototype.getDownloadUrlForFileForDataSetFile = function(fileOrFolder, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(fileOrFolder.dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "getDownloadUrlForFileForDataSet",
- "params" : [ openbisObj.getSession(), fileOrFolder ] },
- success: action
- });
- });
-}
-
-/**
- * Returns a download url that is valid as long as the user session is valid.
- * @method
- */
-openbis.prototype.getDownloadUrlForFileForDataSetFileInSession = function(fileOrFolder, action) {
- this.getDownloadUrlForFileForDataSetInSession(fileOrFolder.dataSetCode, fileOrFolder.path, action);
-}
-
-/**
- * @see IDssServiceRpcGeneric.getDownloadUrlForFileForDataSetWithTimeout(String, DataSetFileDTO, long)
- * @method
- */
-openbis.prototype.getDownloadUrlForFileForDataSetFileWithTimeout = function(fileOrFolder, validityDurationInSeconds, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(fileOrFolder.dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "getDownloadUrlForFileForDataSetWithTimeout",
- "params" : [ openbisObj.getSession(), fileOrFolder, validityDurationInSeconds ] },
- success: action
- });
- });
-}
-
-/**
- * @see IDssServiceRpcGeneric.listFilesForDataSet(String, String, String, boolean)
- * @method
- */
-openbis.prototype.listFilesForDataSet = function(dataSetCode, path, recursive, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "listFilesForDataSet",
- "params" : [ openbisObj.getSession(), dataSetCode, path, recursive ] },
- success: action
- });
- });
-}
-
-/**
- * @see IDssServiceRpcGeneric.getDownloadUrlForFileForDataSet(String, String, String)
- * @method
- */
-openbis.prototype.getDownloadUrlForFileForDataSet = function(dataSetCode, path, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "getDownloadUrlForFileForDataSet",
- "params" : [ openbisObj.getSession(), dataSetCode, path ] },
- success: action
- });
- });
-}
-
-/**
- * Returns a download url that is valid as long as the user session is valid.
- * @method
- */
-openbis.prototype.getDownloadUrlForFileForDataSetInSession = function(dataSetCode, path, action) {
- var openbisObj = this;
- this._internal.getDataStoreUrlForDataSetCode(dataSetCode, function(dataStoreUrl){
- var pathWithoutSlash = path.charAt(0) == "/" ? path.substr(1) : path;
- var url = dataStoreUrl + "/" + dataSetCode + "/" + pathWithoutSlash + "?sessionID=" + openbisObj.getSession();
- action(url);
- });
-}
-
-/**
- * @see IDssServiceRpcGeneric.getDownloadUrlForFileForDataSetWithTimeout(String, String, String, long)
- * @method
- */
-openbis.prototype.getDownloadUrlForFileForDataSetWithTimeout = function(dataSetCode, path, validityDurationInSeconds, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "getDownloadUrlForFileForDataSetWithTimeout",
- "params" : [ openbisObj.getSession(), dataSetCode, path, validityDurationInSeconds ] },
- success: action
- });
- });
-}
-
-/**
- * Creates a session workspace file uploader inside the specified uploaderContainer element and for the default data store.
- * @method
- */
-openbis.prototype.createSessionWorkspaceUploader = function(uploaderContainer, oncomplete, uploaderSettings){
- this.createSessionWorkspaceUploaderForDataStore(uploaderContainer, null, oncomplete, uploaderSettings);
-}
-
-/**
- * Creates a session workspace file uploader inside the specified uploaderContainer element and for the specified data store.
- * @method
- */
-openbis.prototype.createSessionWorkspaceUploaderForDataStore = function(uploaderContainer, dataStoreCodeOrNull, oncomplete, uploaderSettings){
- var uploaderSupported = window.File && window.FileReader && window.XMLHttpRequest;
-
- if(!uploaderSupported){
- alert("Uploader is not supported by your browser.");
- return;
- }
-
- var $this = this;
- this._internal.getDataStoreUrlForDataStoreCode(dataStoreCodeOrNull, function(dataStoreUrl){
- // figure out what is the location of the openbis.js script and assume that uploader resources are served by the same server
- var openbisScriptLocation = $('script[src*=openbis\\.js]').attr('src');
- var uploaderDirectoryLocation = jsFileLocation = openbisScriptLocation.replace(/js\/v1\/openbis\.js/g, 'uploader');
-
- $('head').append('<link rel="stylesheet" media="screen" type="text/css" href="' + uploaderDirectoryLocation + '/css/src/upload.css" />');
- $('head').append('<script charset="utf-8" type="text/javascript" src="' + uploaderDirectoryLocation + '/js/src/upload.js" />');
-
- $(uploaderContainer).load(uploaderDirectoryLocation + "/index.html", function(){
- var finalSettings = {
- smart_mode: true,
- chunk_size: 1000*1024,
- file_upload_url: dataStoreUrl + "/session_workspace_file_upload",
- form_upload_url: dataStoreUrl + "/session_workspace_form_upload",
- file_download_url: dataStoreUrl + "/session_workspace_file_download",
- oncomplete: oncomplete,
- sessionID: $this.getSession()
- };
-
- if(uploaderSettings) {
- for(var key in uploaderSettings) {
- finalSettings[key] = uploaderSettings[key];
- }
- }
-
- Uploader.init(finalSettings);
- });
- });
-}
-
-/**
- * Creates a session workspace download url for a file with the specified filePath and for the default data store.
- * @method
- */
-openbis.prototype.createSessionWorkspaceDownloadUrl = function(filePath, action){
- return this.createSessionWorkspaceDownloadUrlForDataStore(filePath, null, action);
-}
-
-/**
- * Creates a session workspace download url for a file with the specified filePath and for the specified data store.
- * @method
- */
-openbis.prototype.createSessionWorkspaceDownloadUrlForDataStore = function(filePath, dataStoreCodeOrNull, action){
- var openbisObj = this;
-
- this._internal.getDataStoreUrlForDataStoreCode(dataStoreCodeOrNull, function(dataStoreUrl){
- var downloadUrl = dataStoreUrl + "/session_workspace_file_download?sessionID=" + openbisObj.getSession() + "&filePath=" + filePath;
- action(downloadUrl);
- });
-}
-
-/**
- * Create a session workspace download link for a file with the specified filePath at the default data store.
- * @method
- */
-openbis.prototype.createSessionWorkspaceDownloadLink = function(filePath, linkText, action){
- return this.createSessionWorkspaceDownloadLinkForDataStore(filePath, linkText, null, action);
-}
-
-/**
- * Create a session workspace download link for a file with the specified filePath at the specified data store.
- * @method
- */
-openbis.prototype.createSessionWorkspaceDownloadLinkForDataStore = function(filePath, linkText, dataStoreCodeOrNull, action){
- this.createSessionWorkspaceDownloadUrlForDataStore(filePath, dataStoreCodeOrNull, function(downloadUrl){
- var link = $("<a href='" + downloadUrl + "'>" + (linkText ? linkText : filePath) + "</a>");
- action(link);
- });
-}
-
-/**
- * Downloads a session workspace file with the specified filePath from the default data store.
- * @method
- */
-openbis.prototype.downloadSessionWorkspaceFile = function(filePath, action) {
- this.downloadSessionWorkspaceFileForDataStore(filePath, null, action);
-}
-
-/**
- * Downloads a session workspace file with the specified filePath from the specified data store.
- * @method
- */
-openbis.prototype.downloadSessionWorkspaceFileForDataStore = function(filePath, dataStoreCodeOrNull, action) {
- var openbisObj = this;
-
- this.createSessionWorkspaceDownloadUrlForDataStore(filePath, dataStoreCodeOrNull, function(downloadUrl){
- $.ajax({
- type: "GET",
- dataType: "text",
- url: downloadUrl,
- success: openbisObj._internal.ajaxRequestSuccess(action),
- error: openbisObj._internal.ajaxRequestError(action)
- });
- });
-}
-
-/**
- * Deletes a session workspace file with the specified filePath from the default data store.
- * @method
- */
-openbis.prototype.deleteSessionWorkspaceFile = function(filePath, action) {
- this.deleteSessionWorkspaceFileForDataStore(filePath, null, action)
-}
-
-/**
- * Deletes a session workspace file with the specified filePath from the specified data store.
- * @method
- */
-openbis.prototype.deleteSessionWorkspaceFileForDataStore = function(filePath, dataStoreCodeOrNull, action) {
- var openbisObj = this;
-
- this._internal.getDataStoreApiUrlForDataStoreCode(dataStoreCodeOrNull, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: {
- "method" : "deleteSessionWorkspaceFile",
- "params" : [ openbisObj.getSession(), filePath ]
- },
- success: action
- });
- });
-}
-
-/**
- * @see IDssServiceRpcGeneric.getPathToDataSet(String, String, String)
- * @method
- */
-openbis.prototype.getPathToDataSet = function(dataSetCode, overrideStoreRootPathOrNull, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "getPathToDataSet",
- "params" : [ openbisObj.getSession(), dataSetCode, overrideStoreRootPathOrNull ] },
- success: action
- });
- });
-}
-
-/**
- * @see IDssServiceRpcGeneric.tryGetPathToDataSet(String, String, String)
- * @method
- */
-openbis.prototype.tryGetPathToDataSet = function(dataSetCode, overrideStoreRootPathOrNull, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "tryGetPathToDataSet",
- "params" : [ openbisObj.getSession(), dataSetCode, overrideStoreRootPathOrNull ] },
- success: action
- });
- });
-}
-
-/**
- * List shares from the default data store.
- *
- * @see IDssServiceRpcGeneric.listAllShares(String)
- * @method
- */
-openbis.prototype.listAllShares = function(action) {
- this.listAllSharesForDataStore(null, action);
-}
-
-/**
- * List shares from the specified data store.
- *
- * @see IDssServiceRpcGeneric.listAllShares(String)
- * @method
- */
-openbis.prototype.listAllSharesForDataStore = function(dataStoreCodeOrNull, action) {
- var openbisObj = this;
-
- this._internal.getDataStoreApiUrlForDataStoreCode(dataStoreCodeOrNull, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: {
- "method" : "listAllShares",
- "params" : [ openbisObj.getSession() ]
- },
- success: action
- });
- });
-}
-
-/**
- * @see IDssServiceRpcGeneric.shuffleDataSet(String, String, String)
- * @method
- */
-openbis.prototype.shuffleDataSet = function(dataSetCode, shareId, action) {
- var openbisObj = this;
- this._internal.getDataStoreApiUrlForDataSetCode(dataSetCode, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: { "method" : "shuffleDataSet",
- "params" : [ openbisObj.getSession(), dataSetCode, shareId ] },
- success: action
- });
- });
-}
-
-/**
- * Get a validation script from the default data store.
- *
- * @see IDssServiceRpcGeneric.getValidationScript(String, String)
- * @method
- */
-openbis.prototype.getValidationScript = function(dataSetTypeOrNull, action) {
- this.getValidationScriptForDataStore(dataSetTypeOrNull, null, action);
-}
-
-/**
- * Get a validation script from the specified data store.
- *
- * @see IDssServiceRpcGeneric.getValidationScript(String, String)
- * @method
- */
-openbis.prototype.getValidationScriptForDataStore = function(dataSetTypeOrNull, dataStoreCodeOrNull, action) {
- var openbisObj = this;
-
- this._internal.getDataStoreApiUrlForDataStoreCode(dataStoreCodeOrNull, function(dataStoreApiUrl){
- openbisObj._internal.ajaxRequest({
- url: dataStoreApiUrl,
- data: {
- "method" : "getValidationScript",
- "params" : [ openbisObj.getSession(), dataSetTypeOrNull ]
- },
- success: action
- });
- });
-}
-
-/**
- * Get a url that will produce a graph with the given configuration at the default data store.
- *
- * @method
- */
-openbis.prototype.getGraphUrl = function(graphConfig, action) {
- this.getGraphUrlForDataStore(graphConfig, null, action);
-}
-
-/**
- * Get a url that will produce a graph with the given configuration at the specified data store.
- *
- * @method
- */
-openbis.prototype.getGraphUrlForDataStore = function(graphConfig, dataStoreCodeOrNull, action) {
- var openbisObj = this;
-
- this._internal.getDataStoreHostForDataStoreCode(dataStoreCodeOrNull, function(dataStoreHost) {
- var graphUrl = dataStoreHost + "/graphservice/?sessionID=" + openbisObj.getSession();
- for (prop in graphConfig) {
- graphUrl += "&" + prop + "=" + encodeURIComponent(graphConfig[prop]);
- }
- action(graphUrl);
- });
-}
-
-/**
- * =====================
- * OpenBIS graph config
- * =====================
- *
- * Defines the configuration for a graph generated by the server's graphservice.
- *
- * To use, set properties on the object with keys that match the name of the servlet
- * parameters of the graphservice and then call the method getGraphUrl on the openbis
- * object. Do *not* set the sessionID paramter -- this will be filled in by the openbis
- * object.
- *
- * The graphservice is documented here: https://wiki-bsse.ethz.ch/display/openBISDoc/Configuring+Graphs+and+Plots
- *
- * @class
- *
- */
-function openbisGraphConfig(filename, graphtype, title) {
- this.file = filename;
- this["graph-type"] = graphtype;
- this.title = title;
-}
-
-
-/**
- * =====================================================
- * OpenBIS webapp context internal code (DO NOT USE!!!)
- * =====================================================
- */
-
-function _openbisWebAppContextInternal(){
- this.webappCode = this.getParameter("webapp-code");
- this.sessionId = this.getParameter("session-id");
- this.entityKind = this.getParameter("entity-kind");
- this.entityType = this.getParameter("entity-type");
- this.entityIdentifier = this.getParameter("entity-identifier");
- this.entityPermId = this.getParameter("entity-perm-id");
-}
-
-_openbisWebAppContextInternal.prototype.getParameter = function(parameterName){
- var match = location.search.match(RegExp("[?|&]"+parameterName+'=(.+?)(&|$)'));
- if(match && match[1]){
- return decodeURIComponent(match[1].replace(/\+/g,' '));
- }else{
- return null;
- }
-}
-
-/**
- * =======================
- * OpenBIS webapp context
- * =======================
- *
- * Provides a context information for webapps that are embedded inside the OpenBIS UI.
- *
- * @class
- *
- */
-function openbisWebAppContext(){
- this._internal = new _openbisWebAppContextInternal();
-}
-
-openbisWebAppContext.prototype.getWebappCode = function(){
- return this._internal.webappCode;
-}
-
-openbisWebAppContext.prototype.getSessionId = function(){
- return this._internal.sessionId;
-}
-
-openbisWebAppContext.prototype.getEntityKind = function(){
- return this._internal.entityKind;
-}
-
-openbisWebAppContext.prototype.getEntityType = function(){
- return this._internal.entityType;
-}
-
-openbisWebAppContext.prototype.getEntityIdentifier = function(){
- return this._internal.entityIdentifier;
-}
-
-openbisWebAppContext.prototype.getEntityPermId = function(){
- return this._internal.entityPermId;
-}
-
-openbisWebAppContext.prototype.getParameter = function(parameterName){
- return this._internal.getParameter(parameterName);
-}
-
-/**
- * =======================
- * OpenBIS Search Criteria
- * =======================
- *
- * Methods and classes for constructing search criteria objects for use in searches.
- */
-
-/**
- * It is easier to construct instances of match clauses using one of the factory methods:
- *
- * createPropertyMatch
- * createAttributeMatch
- * createTimeAttributeMatch
- * createAnyPropertyMatch
- * createAnyFieldMatch
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause
- * @class
- */
-function SearchCriteriaMatchClause(type, fieldType, fieldCode, desiredValue) {
- this["@type"] = type;
- this["fieldType"] = fieldType;
- this["fieldCode"] = fieldCode;
- this["desiredValue"] = desiredValue;
- // compareMode should be one of "LESS_THAN_OR_EQUAL", "EQUALS", "GREATER_THAN_OR_EQUAL"
- this["compareMode"] = "EQUALS";
-}
-
-/**
- * Factory method to create a match for a property.
- *
- * @param propertyCode The code of the property to compare against
- * @param desiredValue The value used in the comparison
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause.createPropertyMatch(String, String)
- * @method
- */
-SearchCriteriaMatchClause.createPropertyMatch = function(propertyCode, desiredValue) {
- var matchClause = new SearchCriteriaMatchClause("PropertyMatchClause", "PROPERTY", propertyCode, desiredValue);
- matchClause["propertyCode"] = propertyCode;
- return matchClause;
-}
-
-/**
- * Factory method to create a match for an attribute.
- *
- * @param attribute Should be a valid ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClauseAttribute.
- * It should come from this list:
- * // common
- * "CODE", "TYPE", "PERM_ID",
- * // for sample or experiment
- * "SPACE",
- * // for experiment
- * "PROJECT",
- * // for all types of entities
- * "METAPROJECT"
- * @param desiredValue The value used in the comparison
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause.createAttributeMatch(MatchClauseAttribute, String)
- * @method
- */
-SearchCriteriaMatchClause.createAttributeMatch = function(attribute, desiredValue) {
- var matchClause = new SearchCriteriaMatchClause("AttributeMatchClause", "ATTRIBUTE", attribute, desiredValue);
- matchClause["attribute"] = attribute;
- return matchClause;
-}
-
-/**
- * Factory method to create a MatchClause matching against registration or modification
- * date.
- *
- * @param attribute Should be a valid ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClauseTimeAttribute
- * It should come from this list: REGISTRATION_DATE, MODIFICATION_DATE
- *
- * @param mode One of "LESS_THAN_OR_EQUAL", "EQUALS", "GREATER_THAN_OR_EQUAL"
- * @param date The date to compare against, format YYYY-MM-DD
- * @timezone The time zone of the date ("+1", "-5", "0", etc.)
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause.createAttributeMatch(MatchClauseTimeAttribute, CompareMode, String, String)
- * @method
- */
-SearchCriteriaMatchClause.createTimeAttributeMatch = function(attribute, mode, date, timezone)
-{
- var matchClause = new SearchCriteriaMatchClause("TimeAttributeMatchClause", "ATTRIBUTE", attribute, date);
- matchClause["attribute"] = attribute;
- matchClause["compareMode"] = mode;
- matchClause["timeZone"] = timezone;
- return matchClause;
-}
-
-/**
- * Factory method to create a match for against any property.
- *
- * @param desiredValue The value used in the comparison
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause.createAnyPropertyMatch(String)
- * @method
- */
-SearchCriteriaMatchClause.createAnyPropertyMatch = function(desiredValue) {
- var matchClause = new SearchCriteriaMatchClause("AnyPropertyMatchClause", "ANY_PROPERTY", null, desiredValue);
- return matchClause;
-}
-
-/**
- * Factory method to create a match for against any field (property or attribute).
- *
- * @param desiredValue The value used in the comparison
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.MatchClause.createAnyFieldMatch(String)
- * @method
- */
-SearchCriteriaMatchClause.createAnyFieldMatch = function(desiredValue) {
- var matchClause = new SearchCriteriaMatchClause("AnyFieldMatchClause", "ANY_FIELD", null, desiredValue);
- return matchClause;
-}
-
-/**
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria
- * @class
- */
-function SearchCriteria() {
- this["@type"] = "SearchCriteria";
- // operator should be either of "MATCH_ALL_CLAUSES" or "MATCH_ANY_CLAUSES"
- this["operator"] = "MATCH_ALL_CLAUSES";
- this["matchClauses"] = [];
- this["subCriterias"] = [];
-}
-
-/**
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.addMatchClause(MatchClause)
- * @method
- */
-SearchCriteria.prototype.addMatchClause = function(matchClause) {
- this["matchClauses"].push(matchClause);
-};
-
-/**
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchCriteria.addSubCriteria(SearchSubCriteria)
- * @method
- */
-SearchCriteria.prototype.addSubCriteria = function(subCriteria) {
- this["subCriterias"].push(subCriteria);
-};
-
-
-/**
- * It is easier to construct instances of sub criteria using one of the factory methods:
- *
- * createSampleParentCriteria
- * createSampleChildCriteria
- * createSampleContainerCriteria
- * createSampleCriteria
- * createExperimentCriteria
- * createDataSetContainerCriteria
- * createDataSetParentCriteria
- * createDataSetChildCriteria
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria
- * @class
- */
-function SearchSubCriteria(targetEntityKind, searchCriteria) {
- this["@type"] = "SearchSubCriteria";
- this["targetEntityKind"] = targetEntityKind;
- this["criteria"] = searchCriteria;
-}
-
-/**
- * Factory method to create a match for a sample parent.
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria.createSampleParentCriteria(SearchCriteria)
- * @method
- */
-SearchSubCriteria.createSampleParentCriteria = function(searchCriteria) {
- return new SearchSubCriteria("SAMPLE_PARENT", searchCriteria)
-}
-
-/**
- * Factory method to create a match for a sample child.
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria.createSampleChildCriteria(SearchCriteria)
- * @method
- */
-SearchSubCriteria.createSampleChildCriteria = function(searchCriteria) {
- return new SearchSubCriteria("SAMPLE_CHILD", searchCriteria)
-}
-
-/**
- * Factory method to create a match for a sample container.
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria.createSampleContainerCriteria(SearchCriteria)
- * @method
- */
-SearchSubCriteria.createSampleContainerCriteria = function(searchCriteria) {
- return new SearchSubCriteria("SAMPLE_CONTAINER", searchCriteria)
-}
-
-/**
- * Factory method to create a match for a sample.
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria.createSampleCriteria(SearchCriteria)
- * @method
- */
-SearchSubCriteria.createSampleCriteria = function(searchCriteria) {
- return new SearchSubCriteria("SAMPLE", searchCriteria)
-}
-
-/**
- * Factory method to create a match for an experiment.
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria.createExperimentCriteria(SearchCriteria)
- * @method
- */
-SearchSubCriteria.createExperimentCriteria = function(searchCriteria) {
- return new SearchSubCriteria("EXPERIMENT", searchCriteria)
-}
-
-/**
- * Factory method to create a match for a data set container.
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria.createDataSetContainerCriteria(SearchCriteria)
- * @method
- */
-SearchSubCriteria.createDataSetContainerCriteria = function(searchCriteria) {
- return new SearchSubCriteria("DATA_SET_CONTAINER", searchCriteria)
-}
-
-/**
- * Factory method to create a match for a data set parent.
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria.createDataSetParentCriteria(SearchCriteria)
- * @method
- */
-SearchSubCriteria.createDataSetParentCriteria = function(searchCriteria) {
- return new SearchSubCriteria("DATA_SET_PARENT", searchCriteria)
-}
-
-/**
- * Factory method to create a match for a data set child.
- *
- * @see ch.systemsx.cisd.openbis.generic.shared.api.v1.dto.SearchSubCriteria.createDataSetChildCriteria(SearchCriteria)
- * @method
- */
-SearchSubCriteria.createDataSetChildCriteria = function(searchCriteria) {
- return new SearchSubCriteria("DATA_SET_CHILD", searchCriteria)
-}
diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/config.json b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/config.json
deleted file mode 100644
index 9e26dfeeb6e..00000000000
--- a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/config.json
+++ /dev/null
@@ -1 +0,0 @@
-{}
\ No newline at end of file
diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/css/src/upload.css b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/css/src/upload.css
deleted file mode 100644
index 637df1f56e0..00000000000
--- a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/css/src/upload.css
+++ /dev/null
@@ -1,292 +0,0 @@
-/*
-* {
- margin: 0;
- padding: 0;
-}
-html, body {
- font-size: 11px;
- font-family: Tahoma, Arial, sans-serif;
- color: Black;
- background-color: White;
- -webkit-font-smoothing: antialiased;
-}
-body {
- margin: 8px;
- //opacity: 0;
- border: 1px solid Black;
- border-radius: 5px;
- box-shadow: 0px 0px 5px #888;
- -webkit-box-shadow: 0px 0px 5px #888;
- -moz-box-shadow: 0px 0px 5px #888;
-}
-body.starting {
- opacity: 1;
- transition: opacity 0.3s ease;
- -moz-transition: opacity 0.3s ease;
- -o-transition: opacity 0.3s ease;
- -webkit-transition: opacity 0.3s ease;
-}
-h1, h2 {
- background-image: linear-gradient(bottom, Black 8%, SlateGray 89%);
- background-image: -o-linear-gradient(bottom, Black 8%, SlateGray 89%);
- background-image: -moz-linear-gradient(bottom, Black 8%, SlateGray 89%);
- background-image: -webkit-linear-gradient(bottom, Black 8%, SlateGray 89%);
- background-color: #333;
- font-size: 16px;
- font-weight: bold;
- border-radius: 5px 5px 0 0;
- color: white;
- padding: 1ex 1em;
-}
-h2 {
- margin: 0;
- font-size: 12px;
- border-radius: 0;
-}
-
-h2 > a {
- color: white;
- text-decoration: none;
-}
-h2 > a:hover {
- color: white;
- text-decoration: underline;
-}
-h2 > a:visited {
- color: white;
-}
-a {
- color: #222;
-}
-a:visited {
- color: #444;
-}
-a:hover {
- color: #000;
-}
-button {
- box-shadow: inset 0 0 1px white;
- cursor: pointer;
- border-radius: 2px;
- border-top: 1px solid #ccc;
- border-left: 1px solid #aaa;
- border-right: 1px solid #999;
- border-bottom: 1px solid #888;
- background-color: #e0e0e0;
- background-image: linear-gradient(bottom, rgb(220,220,220) 8%, rgb(255,255,255) 89%);
- background-image: -o-linear-gradient(bottom, rgb(220,220,220) 8%, rgb(255,255,255) 89%);
- background-image: -moz-linear-gradient(bottom, rgb(220,220,220) 8%, rgb(255,255,255) 89%);
- background-image: -webkit-linear-gradient(bottom, rgb(200,200,200) 8%, rgb(250,250,250) 89%);
- font-family: Tahoma, Arial, sans-serif;
- padding: 0.5ex 0.5em;
- font-size: 12px;
- margin: 1ex 0;
-}
-button:hover {
- background-image: linear-gradient(bottom, rgb(220,220,220) 8%, rgb(255,255,255) 89%);
- background-image: -o-linear-gradient(bottom, rgb(220,220,220) 8%, rgb(255,255,255) 89%);
- background-image: -moz-linear-gradient(bottom, rgb(220,220,220) 8%, rgb(255,255,255) 89%);
- background-image: -webkit-linear-gradient(bottom, rgb(220,220,220) 8%, rgb(255,255,255) 89%);
-}
-*/
-#filedrop {
- color: #000;
- transition: background-color 0.25s linear;
- -moz-transition: background-color 0.25s linear;
- -o-transition: background-color 0.25s linear;
- -webkit-transition: background-color 0.25s linear;
-}
-#filedrop.over {
- background-color: LemonChiffon;
- transition: background-color 0.25s linear;
- -moz-transition: background-color 0.25s linear;
- -o-transition: background-color 0.25s linear;
- -webkit-transition: background-color 0.25s linear;
-}
-#filedrop-chooser {
- display: inline-block;
- text-align: center;
- padding: 30px 0 0 0;
-}
-#filedrop-inner-box {
- text-align: center;
- padding-bottom: 10px;
-}
-#filedrop-hint {
- clear: both;
- text-align: center;
- padding: 3ex 1em;
- margin: 3ex 1em 0 1em;
- color: #444;
- font-size: 110%;
-}
-button.huge {
- padding: 2ex 4em;
- font-size: 13px;
- font-weight: bold;
-}
-#filelist-container {
- padding: 2ex 1em 3ex 1em;
-}
-#filelist {
- list-style-type: none;
- margin-left: 0;
- line-height: 120%;
- opacity: 0;
- transition: opacity 0.25s linear;
- -moz-transition: opacity 0.25s linear;
- -o-transition: opacity 0.25s linear;
- -webkit-transition: opacity 0.25s linear;
-}
-#filelist.visible {
- opacity: 1;
- transition: opacity 0.25s linear;
- -moz-transition: opacity 0.25s linear;
- -o-transition: opacity 0.25s linear;
- -webkit-transition: opacity 0.25s linear;
-}
-.progressbar-container {
- margin: 1px 0.5em 1px 0;
- padding: 1px;
- display: inline-block;
- width: 50px;
- height: 16px;
- border: 1px solid #000;
- background-color: #fff;
-}
-.progressbar {
- display: inline-block;
- height: 100%;
- width: 0;
- background-color: #666;
- background-image: -webkit-linear-gradient(-45deg, rgba(255, 154, 26, 1) 25%, transparent 25%, transparent 50%, rgba(255, 154, 26, 1) 50%, rgba(255, 154, 26, 1) 75%, transparent 75%, transparent);
- background-image: -moz-linear-gradient(-45deg, rgba(255, 154, 26, 1) 25%, transparent 25%, transparent 50%, rgba(255, 154, 26, 1) 50%, rgba(255, 154, 26, 1) 75%, transparent 75%, transparent);
- background-image: linear-gradient(-45deg, rgba(255, 154, 26, 1) 25%, transparent 25%, transparent 50%, rgba(255, 154, 26, 1) 50%, rgba(255, 154, 26, 1) 75%, transparent 75%, transparent);
- -webkit-background-size: 24px 24px;
- -moz-background-size: 24px 24px;
- background-size: 24px 24px;
- -webkit-box-shadow: inset 0 6px 0 rgba(255, 255, 255, .2);
- -moz-box-shadow: inset 0 6px 0 rgba(255, 255, 255, .2);
- box-shadow: inset 0 6px 0 rgba(255, 255, 255, .2);
- -webkit-animation: move 2s linear infinite;
- -moz-animation: move 2s linear infinite;
- animation: move 2s linear infinite;
- background-position: 0 0;
-}
-@-webkit-keyframes move {
- 0% { background-position: 0 0; }
- 100% { background-position: 24px 24px; }
-}
-@-moz-keyframes move {
- 0% { background-position: 0 0; }
- 100% { background-position: 24px 24px; }
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- 0% { background-position: 0 0; }
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-@-keyframes move {
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-.upload {
- opacity: 0;
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-#upload-form {
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- position: absolute;
- top: 0;
- left: 0;
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-
-#fileinput {
- display: none;
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-
-#upload-icon {
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-.upload.starting {
- opacity: 1;
- -moz-transition: opacity 0.4s linear;
- -o-transition: opacity 0.4s linear;
- -webkit-transition: opacity 0.4s linear;
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-.progressbar.ready {
- width: 100%;
- background-color: #3c3;
- background-image: none;
- -webkit-box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
- -moz-box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
- box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
-}
-.progressbar.aborted {
- width: 100%;
- background-color: rgb(255, 128, 0);
- background-image: none;
- -webkit-box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
- -moz-box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
- -ms-box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
- box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
-}
-#filelist > li.ready {
- color: #333;
-}
-#filelist > li.ready.fadeOut {
- opacity: 0;
- -moz-transition: opacity 0.25s linear;
- -o-transition: opacity 0.25s linear;
- -webkit-transition: opacity 0.25s linear;
-}
-.progressbar.bad {
- width: 100%;
- background-color: #c33;
- background-image: none;
- -webkit-box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
- -moz-box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
- -ms-box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
- box-shadow: inset 0 2px 0 rgba(255, 255, 255, .2);
-}
-#filelist > li.bad {
- color: red;
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-#filelist > li.deleted {
- text-decoration: line-through;
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-#filelist > li.bad.fadeOut {
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- -moz-transition: opacity 0.25s linear;
- -o-transition: opacity 0.25s linear;
- -webkit-transition: opacity 0.25s linear;
-}
-#footer {
- background-image: linear-gradient(bottom, Black 8%, SlateGray 89%);
- background-image: -o-linear-gradient(bottom, Black 8%, SlateGray 89%);
- background-image: -moz-linear-gradient(bottom, Black 8%, SlateGray 89%);
- background-image: -webkit-linear-gradient(bottom, Black 8%, SlateGray 89%);
- background-color: #333;
- border-radius: 0 0 5px 5px;
- color: #999;
- padding: 1ex 1em;
-}
-#footer > a {
- color: #ccc;
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-.mini-button {
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-}
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- position: absolute;
- top: 0;
- left: 0;
- z-index: -100;
-}
-.delete-button {
- cursor:pointer;
- opacity: 0.5;
- font-size: 21px;
-}
-.delete-button:hover {
- opacity: 1;
-}
\ No newline at end of file
diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/favicon.gif b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/favicon.gif
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diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/play-button.png b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/img/play-button.png
deleted file mode 100644
index b9239b63daac3cef4295ee7ea81716a7d3217ae2..0000000000000000000000000000000000000000
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deleted file mode 100644
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GIT binary patch
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diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/index.html b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/index.html
deleted file mode 100644
index 2018e9a4cc0..00000000000
--- a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/index.html
+++ /dev/null
@@ -1,57 +0,0 @@
-<!--
-Copyright 2012 Oliver Lau, Heise Zeitschriften Verlag
-
- Licensed under the Apache License, Version 2.0 (the "License");
- you may not use this file except in compliance with the License.
- You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
--->
-<div id="session-workspace-uploader-main-title"></div>
-<div id="filedrop">
- <div id="filedrop-inner-box">
- <div id="filedrop-chooser">
- <svg id="upload-icon" xmlns="http://www.w3.org/2000/svg" version="1.1" width="200" height="140">
- <linearGradient id="grd" x1="0%" y1="0%" x2="0%" y2="100%">
- <stop offset="10%" style="stop-color: rgb(27, 132, 224);" />
- <stop offset="90%" style="stop-color: rgb(27, 62, 94);" />
- </linearGradient>
- <path transform="translate(10, 10) scale(1.5)" fill="White" d="M 0 10 Q 0 0 10 0 L 110 0 Q 120 0 120 10 L 120 60 Q 120 70 110 70 L 10 70 Q 0 70 0 60 L 0 10 Z" />
- <path transform="translate(10, 10) scale(1.5)" fill="url(#grd)" d="M 0 10 Q 0 0 10 0 L 110 0 Q 120 0 120 10 L 120 60 Q 120 70 110 70 L 85 70 L 85 45 L 110 45 L 60 10 L 10 45 L 35 45 L 35 70 L 10 70 Q 0 70 0 60 L 0 10 Z" />
- </svg>
- <br />
- <button class="huge" id="fileinput-button" type="button">Select files to upload</button>
- </div><!-- filedrop-chooser -->
- <div id="filedrop-hint"></div><!-- filedrop-hint -->
- <form id="upload-form">
- <input type="file" id="fileinput" multiple />
- </form>
- </div><!-- filedrop-inner-box -->
-</div><!-- filedrop -->
-<div id="session-workspace-uploader-uploads-title"></div>
-<div id="filelist-container">
- <ul id="filelist"></ul>
- <button id="filelist-clear-button" style="display: none">Clear all</button>
-</div><!-- filelist-container -->
-<div style="display: none" id="secret-elements">
- <svg class="mini-button" title="Abort" id="stop-button" xmlns="http://www.w3.org/2000/svg" version="1.1" width="12" height="12">
- <rect x="0" y="0" width="12" height="12" fill="#fff" />
- <rect x="1" y="1" width="10" height="10" fill="#c00" />
- </svg>
- <svg class="mini-button" title="Paus" id="pause-button" xmlns="http://www.w3.org/2000/svg" version="1.1" width="12" height="12">
- <rect x="0" y="0" width="12" height="12" fill="#fff" />
- <rect x="2" y="1" width="3" height="10" fill="#00c" />
- <rect x="7" y="1" width="3" height="10" fill="#00c" />
- </svg>
- <svg class="mini-button" title="Continue" id="play-button" xmlns="http://www.w3.org/2000/svg" version="1.1" width="12" height="12">
- <rect x="0" y="0" width="12" height="12" fill="#fff" />
- <path d="M 1 1 L 11 5.5 L 1 11 Z" fill="#0c0" />
- </svg>
-</div>
-<div id="iframe-container"></div>
\ No newline at end of file
diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/js/src/upload.js b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/js/src/upload.js
deleted file mode 100644
index 0dc4f0f9345..00000000000
--- a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/js/src/upload.js
+++ /dev/null
@@ -1,441 +0,0 @@
-//-*- coding: utf-8 -*-
-/*
-Copyright 2012 Oliver Lau, Heise Zeitschriften Verlag
-
- Licensed under the Apache License, Version 2.0 (the "License");
- you may not use this file except in compliance with the License.
- You may obtain a copy of the License at
-
- http://www.apache.org/licenses/LICENSE-2.0
-
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-*/
-
-
-var Uploader = new function () {
- var defaults = {
- upload_dir: "/uploaded",
- file_upload_url: "/uploader2/upload.php",
- form_upload_url: "/uploader2/form-upload.php",
- drop_area: "#filedrop",
- file_list: "#filelist",
- file_input: "#fileinput",
- upload_form: "#upload-form",
- file_input_button: "#fileinput-button",
- //file_list_clear_button: "#filelist-clear-button",
- oncomplete: function(file) { },
- ondelete: function(file) {},
- chunk_size: 100*1024,
- smart_mode: window.File && window.FileReader && window.XMLHttpRequest,
- main_title_container : "#session-workspace-uploader-main-title",
- uploads_title_container : "#session-workspace-uploader-uploads-title",
- main_title : "<h2>Session workspace upload</h2>",
- uploads_title : "<h2>Uploads</h2>"
- };
-
-
- var current_upload_id = 0;
- var current_form_id = 0;
- var progress = {};
- var form = {};
- var settings = defaults;
-
-
- function reset() {
- current_upload_id = 0;
- current_form_id = 0;
- progress = {};
- $(settings.file_list).removeClass("visible");
- //$(settings.file_list_clear_button).css("display", "none");
- setTimeout(function() {
- $(settings.file_list).empty();
- }, 256);
- }
-
-
- function async_exec(f, ms) {
- ms = ms || 100;
- setTimeout(f, ms);
- }
-
-
- this.uploadsInProgress = function() {
- return Object.keys(progress).length > 0;
- }
-
-
-// function clearFileList() {
-// if (this.uploadsInProgress()) {
-// $(".ready").addClass("fadeOut");
-// $(".bad").addClass("fadeOut");
-// $(".aborted").addClass("fadeOut");
-// setTimeout(function() {
-// $(".ready").remove();
-// $(".bad").remove();
-// $(".aborted").remove();
-// }, 256);
-// }
-// else {
-// reset();
-// }
-// }
-
-
- function styleSize(n) {
- var prefixes = [ "KB", "MB", "GB" ];
- var prefix = "bytes";
- while (n > 10240 && prefixes.length > 0) {
- n /= 1024;
- prefix = prefixes.shift();
- }
- return Math.round(n) + " " + prefix;
- }
-
-
- function makeChunk(file, startByte, endByte) {
- var blob = undefined;
- if (file.slice)
- blob = file.slice(startByte, endByte);
- else if (file.webkitSlice)
- blob = file.webkitSlice(startByte, endByte);
- else if (file.mozSlice)
- blob = file.mozSlice(startByte, endByte);
- return blob;
- }
-
-
- function resumeUpload(id) {
- progress[id].pause = false;
- progress[id].abort = false;
- $("#play-button-" + id).remove();
- $("#pause-button").clone().attr("id", "pause-button-" + id)
- .appendTo("#action-bar-" + id)
- .click(function() {
- pauseUpload(id);
- });
- var startByte = progress[id].bytesSent;
- var endByte = startByte + settings.chunk_size;
- if (endByte > progress[id].file.size)
- endByte = progress[id].file.size;
- var blob = makeChunk(progress[id].file, startByte, endByte);
- uploadChunk(progress[id].file, blob, id, startByte, endByte);
- }
-
-
- function abortUpload(id) {
- progress[id].abort = true;
- progress[id].xhr.abort();
- }
-
-
- function showUploadingError(id) {
- Util.showError("Uploading of \'" + progress[id].file.name + "\' failed");
- }
-
-
- function pauseUpload(id) {
- progress[id].pause = true;
- $("#pause-button-" + id).remove();
- $("#play-button").clone().attr("id", "play-button-" + id)
- .appendTo("#action-bar-" + id)
- .click(function() {
- resumeUpload(id);
- });
- }
-
-
- function uploadChunk(file, blob, id, startByte, endByte) {
- if (typeof progress[id] === "undefined" || progress[id].abort || progress[id].pause)
- return;
- var reader = new FileReader;
- reader.onload = function(e) {
- if (e.target.readyState == FileReader.DONE) {
- if (typeof progress[id] === "undefined")
- return;
- var xhr = new XMLHttpRequest;
- progress[id].xhr = xhr;
- // pkupczyk: added sessionID
- xhr.open("POST", settings.file_upload_url +
- "?filename=" + encodeURIComponent(file.name) +
- "&id=" + id +
- "&startByte=" + startByte +
- "&endByte=" + endByte +
- "&sessionID=" + settings.sessionID,
- true);
- xhr.setRequestHeader("Content-type", "multipart/form-data");
- xhr.onload = function(e) {
- var d = JSON.parse(xhr.responseText);
- if (typeof progress[d.id] === "undefined")
- return;
- if (d.status === "ok") {
- progress[d.id].bytesSent += d.endByte - d.startByte;
- var secs = 1e-3 * (Date.now() - progress[d.id].startTime);
- if (progress[d.id].bytesSent < file.size) {
- var percentage = 100 * progress[d.id].bytesSent / file.size;
- $("#progressbar-" + d.id).css("width", percentage + "%");
- $("#speed-" + d.id).html(styleSize(progress[d.id].bytesSent / secs) + "/s");
- startByte = endByte;
- endByte += settings.chunk_size;
- if (endByte > file.size)
- endByte = file.size;
- var blob = makeChunk(file, startByte, endByte);
- uploadChunk(file, blob, id, startByte, endByte);
- }
- else {
- $("#progressbar-" + d.id).addClass("ready");
- $("#progressbar-" + d.id).css("width", "100%");
- $("#upload-" + d.id).addClass("ready");
- $("#speed-" + d.id).html(styleSize(file.size / secs) + "/s");
- // pkupczyk: changed download url
- $("#filename-" + d.id).replaceWith("<a target=\"_blank\" " +
- "href=\"" + settings.file_download_url + "?sessionID=" + settings.sessionID + "&filePath=" +
- encodeURIComponent(d.filename) + "\">" + d.filename + "</a>");
- $("#action-bar-" + d.id).remove();
- delete progress[d.id];
- settings.oncomplete(file);
- }
- }
- else {
- $("#progressbar-" + d.id).addClass("bad");
- $("#upload-" + d.id).addClass("bad");
- $("#speed-" + d.id).replaceWith("<strong>" + d.message + "</strong>");
- $("#action-bar-" + d.id).remove();
- delete progress[d.id];
- }
- };
- xhr.onabort = function(e) {
- $("#progressbar-" + id).addClass("aborted");
- $("#upload-" + id).addClass("aborted");
- $("#action-bar-" + id).remove();
- showUploadingError(id);
- delete progress[id];
- };
- xhr.onerror = function(e) {
- $("#progressbar-" + id).addClass("bad");
- $("#upload-" + id).addClass("bad");
- $("#action-bar-" + id).remove();
- showUploadingError(id);
- delete progress[id];
- };
- xhr.send(e.target.result);
- }
- };
- reader.onerror = function(e) {
- switch (e.target.error.code) {
- case e.target.error.NOT_FOUND_ERR:
- alert("File not found.");
- break;
- case e.target.error.NOT_READABLE_ERR:
- alert("File not readable.");
- break;
- case e.target.error.ABORT_ERR:
- console.log("File reading aborted.");
- break;
- default:
- alert("An error occurred while accessing the file.");
- break;
- }
- };
- reader.onabort = function() {
- alert("Reading of the file aborted.");
- };
- reader.readAsArrayBuffer(blob);
- }
-
-
- function upload(file) {
- var id = current_upload_id;
- ++current_upload_id;
- $(settings.file_list)
- .append("<li class=\"upload\" id=\"upload-" + id + "\">" +
- "<span id='delete-" + id + "' class='delete-button'>X</span> " +
- "<span id=\"progress-" + id + "\" class=\"progressbar-container\">" +
- "<span id=\"progressbar-" + id + "\" class=\"progressbar\"></span>" +
- "</span>" +
- "<span id=\"action-bar-" + id + "\"></span> " +
- "<span id=\"filename-" + id + "\">" + file.name + "</span>" +
- " (" + styleSize(file.size) + ", " +
- "<span id=\"speed-" + id + "\">? KB/s</span>)" +
- "</li>");
- $("#delete-"+id).click(function() {
- if(!progress[id]) {
- var fileData = file;
- $( "#upload-"+id).remove();
- settings.ondelete(fileData);
- } else {
- alert("The upload is in progress, please wait.");
- }
- });
-
- $("#upload-" + id).addClass("starting");
- if (settings.smart_mode) {
- $("#stop-button").clone().attr("id", "stop-button-" + id)
- .appendTo("#action-bar-" + id)
- .click(function() {
- abortUpload(id);
- });
- $("#pause-button").clone().attr("id", "pause-button-" + id)
- .appendTo("#action-bar-" + id)
- .click(function() {
- pauseUpload(id);
- });
- progress[id] = {
- file: file,
- startTime: Date.now(),
- bytesSent: 0,
- abort: false,
- pause: false,
- xhr: null
- };
- // 1. Chunk will be uploaded, further chunks will be uploaded via onload-Handler
- var lastByte = (file.size < settings.chunk_size)? file.size : settings.chunk_size;
- var blob = makeChunk(file, 0, lastByte);
- uploadChunk(file, blob, id, 0, lastByte);
- }
- else {
- $("#progressbar-" + id).css("width", "100%");
- }
- }
-
-
- function uploadFiles(files) {
- $(settings.file_list).addClass("visible");
- //$(settings.file_list_clear_button).css("display", "inline");
- if (typeof files === "object" && files.length > 0) {
- $.each(files, function() { upload(this); });
- }
- }
-
-
- function generateUploadForm() {
- var id = ++current_form_id;
- $("#iframe-container")
- // pkupczyk: added sessionID
- .append("<iframe id=\"iframe-" + id + "\"" +
- " name=\"iframe-" + id + "\"" +
- "></iframe>" +
- "<form action=\"" + settings.form_upload_url + "?sessionID=" + settings.sessionID + "\"" +
- " target=\"iframe-" + id + "\"" +
- " id=\"form-" + id + "\"" +
- " enctype=\"multipart/form-data\"" +
- " method=\"POST\">" +
- "<input type=\"file\" multiple name=\"files[]\"" +
- " id=\"fileinput-" + id + "\" />" +
- "</form>");
- $("#fileinput-" + id)
- .bind("change", function(event) {
- var files = event.target.files;
- uploadFiles(files);
- if (!settings.smart_mode) {
- generateUploadForm();
- event.target.form.submit();
- }
- event.preventDefault();
- return false;
- })
- $(settings.file_input_button)
- .unbind("click")
- .bind("click", function() {
- $("#fileinput-" + id).trigger("click");
- });
- $("#iframe-" + id).bind("load", { id: id }, function(event) {
- var id = event.data.id,
- iframe = document.getElementById("iframe-" + id).contentDocument;
- if (iframe.location.href !== "about:blank") {
- $(".progressbar").addClass("ready");
- $("#iframe-" + id).remove();
- $("#form-" + id).remove();
- }
- });
- }
-
- this.init = function(opts) {
- // Checks whether the browser can show SVG, if not PNGs are used
- var svgSupported = (function() {
- var svg;
- try {
- svg = document.createElementNS("http://www.w3.org/2000/svg", "svg");
- } catch (e) { console.log(e); }
- return typeof svg !== "undefined" ||
- (navigator.userAgent.match(/(Safari|MSIE [5-9])/)
- && !navigator.userAgent.match(/Chrome/));
- })();
- if (!svgSupported) {
- $("#upload-icon").replaceWith("<img id=\"upload-icon\" src=\"img/upload-icon.png\" width=\"200\" height=\"140\">");
- $("#play-button").replaceWith("<img id=\"play-button\" src=\"img/play-button.png\" width=\"12\" height=\"12\" class=\"mini-button\">");
- $("#stop-button").replaceWith("<img id=\"stop-button\" src=\"img/stop-button.png\" width=\"12\" height=\"12\" class=\"mini-button\">");
- $("#pause-button").replaceWith("<img id=\"pause-button\" src=\"img/pause-button.png\" width=\"12\" height=\"12\" class=\"mini-button\">");
- }
- // Site-spezifische Einstellungen aus Konfigurationsdatei lesen
-
- /* pkupczyk: we don't need this
-
- $.ajax("config.json", { async: false })
- .done(function(data) {
- settings = $.extend({}, settings, data);
- })
- .error(function(jqXHR, textStatus, errorThrown) {
- console.log([jqXHR, textStatus, errorThrown]);
- });
- */
-
- // Settings might be overwritten by init() parameters
- settings = $.extend({}, settings, opts);
- settings.smart_mode = settings.smart_mode && defaults.smart_mode;
-
- // pkupczyk: we do not provide listing of uploaded files yet
- //$("h2 > a").attr("href", settings.upload_dir);
-
- if (settings.smart_mode) {
- $("#filedrop-hint").html("Drag and drop the files to upload here or click 'Select files to upload' button.");
- $(settings.file_input)
- .bind("change", function(event) {
- uploadFiles(event.target.files);
- });
- $(settings.file_input_button)
- .click(function() {
- $(settings.file_input).trigger("click");
- });
- $(settings.drop_area).bind(
- {
- dragover: function(event) {
- var e = event.originalEvent;
- e.stopPropagation();
- e.preventDefault();
- e.dataTransfer.dropEffect = "copy";
- $(settings.drop_area).addClass("over");
- }
- ,
- dragleave: function(event) {
- var e = event.originalEvent;
- e.stopPropagation();
- e.preventDefault();
- $(settings.drop_area).removeClass("over");
- }
- ,
- drop: function(event) {
- var e = event.originalEvent;
- e.stopPropagation();
- e.preventDefault();
- $(settings.drop_area).removeClass("over");
- uploadFiles(e.dataTransfer.files);
- }
- }
- );
- }
- else { // fallback mode
- $("#filedrop-hint").html("Click 'Select files to upload' button.");
- generateUploadForm();
- }
- //$(settings.file_list_clear_button).click(clearFileList);
- $("#filedrop-hint").append("<br/>Upload starts immediately after the file selection.");
-
- //Setting titles
- $(settings.main_title_container).append(settings.main_title);
- $(settings.uploads_title_container).append(settings.uploads_title);
- }
-}
diff --git a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/version.txt b/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/version.txt
deleted file mode 100644
index 9babdc33706..00000000000
--- a/openbis_standard_technologies/dist/core-plugins/eln-lims/1/as/webapps/eln-lims/html/lib/openbis/uploader/version.txt
+++ /dev/null
@@ -1 +0,0 @@
-Revision: b36e1b0a9c22 (2 Aug 2012)
--
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