diff --git a/openbis/source/sql/generic/138/data-138.sql b/openbis/source/sql/generic/138/data-138.sql new file mode 100644 index 0000000000000000000000000000000000000000..546da061e342eb89fd45b6c84d7945b4d0613f21 --- /dev/null +++ b/openbis/source/sql/generic/138/data-138.sql @@ -0,0 +1,506 @@ +---------------------------------------------------------------------------- +-- Purpose: Insert an initial data set into the table DATABASE_INSTANCES +---------------------------------------------------------------------------- + +INSERT INTO database_instances( + id + , code + , uuid + , is_original_source) + VALUES ( nextval('DATABASE_INSTANCE_ID_SEQ') + , 'SYSTEM_DEFAULT' + , 'SYSTEM_DEFAULT' + , 'T'); + +---------------------------------------------------------------------- +-- Purpose: Insert an initial data set into the table PERSONS +----------------------------------------------------------------------- + +insert into persons +(id +,first_name +,last_name +,user_id +,email +,dbin_id) +values +(nextval('PERSON_ID_SEQ') +,'' +,'System User' +,'system' +,'' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') ); + +----------------------------------------------------------------------------------- +-- Purpose: Create Controlled Vocabulary STORAGE_FORMAT +----------------------------------------------------------------------------------- +insert into controlled_vocabularies + ( id + , code + , is_internal_namespace + , description + , pers_id_registerer + , is_managed_internally + , dbin_id) +values (nextval('CONTROLLED_VOCABULARY_ID_SEQ') + , 'STORAGE_FORMAT' + , true + , 'The on-disk storage format of a data set' + , (select id from persons where user_id ='system') + , true + , (select id from database_instances where code = 'SYSTEM_DEFAULT')); + + +----------------------------------------------------------------------------------- +-- Purpose: Create Controlled Vocabulary Terms for STORAGE_FORMAT +----------------------------------------------------------------------------------- +insert into controlled_vocabulary_terms + ( id + , code + , covo_id + , pers_id_registerer + , ordinal ) +values (nextval('CVTE_ID_SEQ') + , 'PROPRIETARY' + , (select id from controlled_vocabularies where code = 'STORAGE_FORMAT' and is_internal_namespace = true) + , (select id from persons where user_id ='system') + , 1); + +insert into controlled_vocabulary_terms + ( id + , code + , covo_id + , pers_id_registerer + , ordinal) +values (nextval('CVTE_ID_SEQ') + , 'BDS_DIRECTORY' + , (select id from controlled_vocabularies where code = 'STORAGE_FORMAT' and is_internal_namespace = true) + , (select id from persons where user_id ='system') + , 2); + +------------------------------------------------------------------ +-- Purpose: Insert an initial data set into the table DATA_TYPES +------------------------------------------------------------------ + +insert into data_types +(id +,code +,description) +values +(nextval('DATA_TYPE_ID_SEQ') +,'VARCHAR' +,'Short text' +); + +insert into data_types +(id + ,code + ,description) + values + (nextval('DATA_TYPE_ID_SEQ') + ,'MULTILINE_VARCHAR' + ,'Long text' +); + +insert into data_types +(id +,code +,description) +values +(nextval('DATA_TYPE_ID_SEQ') +,'INTEGER' +,'Integer number' +); + +insert into data_types +(id +,code +,description) +values +(nextval('DATA_TYPE_ID_SEQ') +,'REAL' +,'Real number, i.e. an inexact, variable-precision numeric type' +); + +insert into data_types +(id +,code +,description) +values +(nextval('DATA_TYPE_ID_SEQ') +,'BOOLEAN' +,'True or False' +); + +insert into data_types +(id +,code +,description) +values +(nextval('DATA_TYPE_ID_SEQ') +,'TIMESTAMP' +,'Both date and time. Format: yyyy-mm-dd hh:mm:ss' +); + +insert into data_types +(id + ,code + ,description) + values + (nextval('DATA_TYPE_ID_SEQ') + ,'CONTROLLEDVOCABULARY' + ,'Controlled Vocabulary' +); + +insert into data_types +(id + ,code + ,description) + values + (nextval('DATA_TYPE_ID_SEQ') + ,'MATERIAL' + ,'Reference to a material' +); + +insert into data_types +(id + ,code + ,description) + values + (nextval('DATA_TYPE_ID_SEQ') + ,'HYPERLINK' + ,'Address of a web page' +); + +insert into data_types +(id + ,code + ,description) + values + (nextval('DATA_TYPE_ID_SEQ') + ,'XML' + ,'XML document' +); + +---------------------------------------------------------------------- +-- Purpose: Insert an initial data set into the table PROPERTY_TYPES +----------------------------------------------------------------------- + +insert into property_types +(id +,code +,description +,label +,daty_id +,pers_id_registerer +,dbin_id) +values +(nextval('PROPERTY_TYPE_ID_SEQ') +,'DESCRIPTION' +,'A Description' +,'Description' +,(select id from data_types where code ='VARCHAR') +,(select id from persons where user_id ='system') +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +-------------------------------------------------------------------------- +-- Purpose: Insert an initial data set into the table EXPERIMENT_TYPES +-------------------------------------------------------------------------- + +insert into experiment_types +(id +,code +,description +,dbin_id) +values +(nextval('EXPERIMENT_TYPE_ID_SEQ') +,'UNKNOWN' +,'Unknown' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +-------------------------------------------------------------------------- +-- Purpose: Insert an initial data set into the table SAMPLE_TYPES +-------------------------------------------------------------------------- + +insert into sample_types +(id +,code +,description +,dbin_id) +values +(nextval('SAMPLE_TYPE_ID_SEQ') +,'UNKNOWN' +,'Unknown' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +-------------------------------------------------------------------------- +-- Purpose: Insert an initial data set into the table DATA_SET_TYPES +-------------------------------------------------------------------------- + +insert into data_set_types +(id +,code +,description +,dbin_id) +values +(nextval('DATA_SET_TYPE_ID_SEQ') +,'UNKNOWN' +,'Unknown' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +------------------------------------------------------------------------- +-- Purpose: Insert an initial data set into the table FILE_FORMAT_TYPES +------------------------------------------------------------------------- + +insert into file_format_types +(id +,code +,description +,dbin_id) +values +(nextval('FILE_FORMAT_TYPE_ID_SEQ') +,'HDF5' +,'Hierarchical Data Format File, version 5' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +insert into file_format_types +(id +,code +,description +,dbin_id) +values +(nextval('FILE_FORMAT_TYPE_ID_SEQ') +,'PROPRIETARY' +,'Proprietary Format File' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +insert into file_format_types +(id +,code +,description +,dbin_id) +values +(nextval('FILE_FORMAT_TYPE_ID_SEQ') +,'SRF' +,'Sequence Read Format File' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +insert into file_format_types +(id +,code +,description +,dbin_id) +values +(nextval('FILE_FORMAT_TYPE_ID_SEQ') +,'TIFF' +,'TIFF File' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +insert into file_format_types +(id +,code +,description +,dbin_id) +values +(nextval('FILE_FORMAT_TYPE_ID_SEQ') +,'TSV' +,'Tab Separated Values File' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +insert into file_format_types +(id +,code +,description +,dbin_id) +values +(nextval('FILE_FORMAT_TYPE_ID_SEQ') +,'XML' +,'XML File' +,(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +--------------------------------------------------------------------- +-- Purpose: Insert an initial data set into the table LOCATOR_TYPES +--------------------------------------------------------------------- + +insert into locator_types +(id +,code +,description) +values +(nextval('LOCATOR_TYPE_ID_SEQ') +,'RELATIVE_LOCATION' +,'Relative Location' +); + +--------------------------------------------------------------------- +-- Purpose: Insert an initial data into table RELATIONSHIP_TYPES +--------------------------------------------------------------------- + +insert into relationship_types +(id, +code, +label, +parent_label, +child_label, +description, +pers_id_registerer, +is_managed_internally, +is_internal_namespace, +dbin_id) +values +( +nextval('RELATIONSHIP_TYPE_ID_SEQ'), +'PARENT_CHILD', +'Parent - Child', +'Parent', +'Child', +'Parent - Child relationship', +(select id from persons where user_id ='system'), +'T', +'T', +(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +insert into relationship_types +(id, +code, +label, +parent_label, +child_label, +description, +pers_id_registerer, +is_managed_internally, +is_internal_namespace, +dbin_id) +values +( +nextval('RELATIONSHIP_TYPE_ID_SEQ'), +'PLATE_CONTROL_LAYOUT', +'Plate - Control Layout', +'Plate', +'Control Layout', +'Plate - Control Layout relationship', +(select id from persons where user_id ='system'), +'T', +'T', +(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +insert into relationship_types +(id, +code, +label, +parent_label, +child_label, +description, +pers_id_registerer, +is_managed_internally, +is_internal_namespace, +dbin_id) +values +( +nextval('RELATIONSHIP_TYPE_ID_SEQ'), +'CONTAINER_COMPONENT', +'Container - Component', +'Container', +'Component', +'Container - Component relationship', +(select id from persons where user_id ='system'), +'T', +'T', +(select id from database_instances where code = 'SYSTEM_DEFAULT') +); + +--------------------------------------------------------------------- +-- Purpose: Create default space +--------------------------------------------------------------------- + +insert into spaces +(id, +code, +dbin_id, +pers_id_registerer) +values +( +nextval('SPACE_ID_SEQ'), +'DEFAULT', +(select id from database_instances where code = 'SYSTEM_DEFAULT'), +(select id from persons where user_id ='system') +); + +--------------------------------------------------------------------- +-- Purpose: Create default project +--------------------------------------------------------------------- + +select nextval('PROJECT_ID_SEQ'); +insert into projects +(id, +perm_id, +code, +space_id, +pers_id_registerer) +values +( +currval('PROJECT_ID_SEQ'), +to_char(now(), 'YYYYMMDDHH24MISSMS')||'-'||currval('PROJECT_ID_SEQ'), +'DEFAULT', +(select id from spaces where code = 'DEFAULT'), +(select id from persons where user_id ='system') +); + +--------------------------------------------------------------------- +-- Purpose: Create default experiment +--------------------------------------------------------------------- + +select nextval('EXPERIMENT_ID_SEQ'); +insert into experiments_all +(id, +perm_id, +code, +proj_id, +exty_id, +pers_id_registerer) +values +( +currval('EXPERIMENT_ID_SEQ'), +to_char(now(), 'YYYYMMDDHH24MISSMS')||'-'||currval('EXPERIMENT_ID_SEQ'), +'DEFAULT', +(select id from projects where code = 'DEFAULT'), +(select id from experiment_types where code = 'UNKNOWN'), +(select id from persons where user_id ='system') +); + +--------------------------------------------------------------------- +-- Purpose: Create default sample +--------------------------------------------------------------------- + +select nextval('SAMPLE_ID_SEQ'); +insert into samples_all +(id, +perm_id, +code, +expe_id, +space_id, +saty_id, +pers_id_registerer) +values +( +currval('SAMPLE_ID_SEQ'), +to_char(now(), 'YYYYMMDDHH24MISSMS')||'-'||currval('SAMPLE_ID_SEQ'), +'DEFAULT', +(select id from experiments where code = 'DEFAULT'), +(select id from spaces where code = 'DEFAULT'), +(select id from sample_types where code = 'UNKNOWN'), +(select id from persons where user_id ='system') +); + diff --git a/openbis/source/sql/generic/138/schema-138.sql b/openbis/source/sql/generic/138/schema-138.sql new file mode 100644 index 0000000000000000000000000000000000000000..27d4020c3a92e82155fb4af0ed1b201d95dfd4cb --- /dev/null +++ b/openbis/source/sql/generic/138/schema-138.sql @@ -0,0 +1,792 @@ +-- Creating tables + +CREATE TABLE CONTROLLED_VOCABULARIES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL,IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_INTERNAL_NAMESPACE BOOLEAN_CHAR NOT NULL DEFAULT 'F',DBIN_ID TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, IS_CHOSEN_FROM_LIST BOOLEAN_CHAR NOT NULL DEFAULT TRUE, SOURCE_URI CHARACTER VARYING(250)); +CREATE TABLE CONTROLLED_VOCABULARY_TERMS (ID TECH_ID NOT NULL,CODE OBJECT_NAME NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,COVO_ID TECH_ID NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL,LABEL COLUMN_LABEL, DESCRIPTION DESCRIPTION_2000, ORDINAL ORDINAL_INT NOT NULL, IS_OFFICIAL BOOLEAN_CHAR NOT NULL DEFAULT 'T'); +CREATE TABLE DATA_ALL (ID TECH_ID NOT NULL,CODE CODE,DSTY_ID TECH_ID NOT NULL,DAST_ID TECH_ID NOT NULL,EXPE_ID TECH_ID NOT NULL,DATA_PRODUCER_CODE CODE,PRODUCTION_TIMESTAMP TIME_STAMP,SAMP_ID TECH_ID,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID,IS_PLACEHOLDER BOOLEAN_CHAR DEFAULT 'F',IS_VALID BOOLEAN_CHAR DEFAULT 'T', MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, IS_DERIVED BOOLEAN_CHAR NOT NULL, DEL_ID TECH_ID, ORIG_DEL TECH_ID, PERS_ID_MODIFIER TECH_ID, VERSION INTEGER DEFAULT 0); +CREATE TABLE DATABASE_INSTANCES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,UUID CODE NOT NULL,IS_ORIGINAL_SOURCE BOOLEAN_CHAR NOT NULL DEFAULT 'F',REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE DATA_SET_RELATIONSHIPS_ALL (DATA_ID_PARENT TECH_ID NOT NULL,DATA_ID_CHILD TECH_ID NOT NULL, RELATIONSHIP_ID TECH_ID NOT NULL, ORDINAL INTEGER, DEL_ID TECH_ID, PERS_ID_AUTHOR TECH_ID, REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE DATA_STORES (ID TECH_ID NOT NULL,DBIN_ID TECH_ID NOT NULL,CODE CODE NOT NULL,DOWNLOAD_URL VARCHAR(1024) NOT NULL,REMOTE_URL VARCHAR(250) NOT NULL,SESSION_TOKEN VARCHAR(50) NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, IS_ARCHIVER_CONFIGURED BOOLEAN_CHAR NOT NULL DEFAULT 'F', DATA_SOURCE_DEFINITIONS TEXT_VALUE); +CREATE TABLE DATA_STORE_SERVICES (ID TECH_ID NOT NULL, KEY VARCHAR(256) NOT NULL, LABEL VARCHAR(256) NOT NULL, KIND DATA_STORE_SERVICE_KIND NOT NULL, DATA_STORE_ID TECH_ID NOT NULL, REPORTING_PLUGIN_TYPE DATA_STORE_SERVICE_REPORTING_PLUGIN_TYPE); +CREATE TABLE DATA_STORE_SERVICE_DATA_SET_TYPES (DATA_STORE_SERVICE_ID TECH_ID NOT NULL, DATA_SET_TYPE_ID TECH_ID NOT NULL); +CREATE TABLE DATA_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000 NOT NULL); +CREATE TABLE EVENTS (ID TECH_ID NOT NULL,EVENT_TYPE EVENT_TYPE NOT NULL,DESCRIPTION TEXT_VALUE,REASON DESCRIPTION_2000,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, entity_type VARCHAR(80) NOT NULL, identifiers TEXT_VALUE NOT NULL); +CREATE TABLE EXPERIMENTS_ALL (ID TECH_ID NOT NULL,PERM_ID CODE NOT NULL,CODE CODE NOT NULL,EXTY_ID TECH_ID NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, PROJ_ID TECH_ID NOT NULL,DEL_ID TECH_ID, ORIG_DEL TECH_ID, IS_PUBLIC BOOLEAN_CHAR NOT NULL DEFAULT 'F', PERS_ID_MODIFIER TECH_ID, VERSION INTEGER DEFAULT 0); +CREATE TABLE ATTACHMENTS (ID TECH_ID NOT NULL,EXPE_ID TECH_ID,SAMP_ID TECH_ID,PROJ_ID TECH_ID,EXAC_ID TECH_ID NOT NULL,FILE_NAME FILE_NAME NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,VERSION INTEGER NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL, title TITLE_100, description DESCRIPTION_2000); +CREATE TABLE ATTACHMENT_CONTENTS (ID TECH_ID NOT NULL,VALUE FILE NOT NULL); +CREATE TABLE EXPERIMENT_PROPERTIES (ID TECH_ID NOT NULL,EXPE_ID TECH_ID NOT NULL,ETPT_ID TECH_ID NOT NULL,VALUE TEXT_VALUE,CVTE_ID TECH_ID, MATE_PROP_ID TECH_ID, PERS_ID_REGISTERER TECH_ID NOT NULL, REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, PERS_ID_AUTHOR TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE EXPERIMENT_PROPERTIES_HISTORY (ID TECH_ID NOT NULL, EXPE_ID TECH_ID NOT NULL, ETPT_ID TECH_ID NOT NULL, VALUE TEXT_VALUE, VOCABULARY_TERM IDENTIFIER, MATERIAL IDENTIFIER, PERS_ID_AUTHOR TECH_ID NOT NULL, VALID_FROM_TIMESTAMP TIME_STAMP NOT NULL, VALID_UNTIL_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE EXPERIMENT_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000,DBIN_ID TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, VALIDATION_SCRIPT_ID TECH_ID); +CREATE TABLE EXPERIMENT_TYPE_PROPERTY_TYPES (ID TECH_ID NOT NULL,EXTY_ID TECH_ID NOT NULL,PRTY_ID TECH_ID NOT NULL,IS_MANDATORY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, ORDINAL ORDINAL_INT NOT NULL, SECTION DESCRIPTION_2000,SCRIPT_ID TECH_ID,IS_SHOWN_EDIT BOOLEAN_CHAR NOT NULL DEFAULT 'T',SHOW_RAW_VALUE BOOLEAN_CHAR NOT NULL DEFAULT 'F'); +CREATE TABLE EXTERNAL_DATA (DATA_ID TECH_ID NOT NULL,SHARE_ID CODE,SIZE ORDINAL_INT,LOCATION VARCHAR(1024) NOT NULL,FFTY_ID TECH_ID NOT NULL,LOTY_ID TECH_ID NOT NULL,CVTE_ID_STOR_FMT TECH_ID NOT NULL,IS_COMPLETE BOOLEAN_CHAR_OR_UNKNOWN NOT NULL DEFAULT 'U',CVTE_ID_STORE TECH_ID, STATUS ARCHIVING_STATUS NOT NULL DEFAULT 'AVAILABLE', PRESENT_IN_ARCHIVE BOOLEAN_CHAR DEFAULT 'F', SPEED_HINT INTEGER NOT NULL DEFAULT -50, STORAGE_CONFIRMATION BOOLEAN_CHAR NOT NULL DEFAULT 'F'); +CREATE TABLE FILE_FORMAT_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000,DBIN_ID TECH_ID NOT NULL); +CREATE TABLE GRID_CUSTOM_COLUMNS (ID TECH_ID NOT NULL, DBIN_ID TECH_ID NOT NULL, CODE VARCHAR(200) NOT NULL, LABEL column_label NOT NULL, DESCRIPTION DESCRIPTION_2000,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, PERS_ID_REGISTERER TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, EXPRESSION GRID_EXPRESSION NOT NULL, IS_PUBLIC BOOLEAN NOT NULL, GRID_ID GRID_ID NOT NULL); +CREATE TABLE SPACES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DBIN_ID TECH_ID NOT NULL,DESCRIPTION DESCRIPTION_2000,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL); +CREATE TABLE DELETIONS (ID TECH_ID NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,REASON DESCRIPTION_2000 NOT NULL); +CREATE TABLE LOCATOR_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000); +CREATE TABLE MATERIALS (ID TECH_ID NOT NULL,CODE CODE NOT NULL,MATY_ID TECH_ID NOT NULL,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, DBIN_ID TECH_ID NOT NULL); +CREATE TABLE MATERIAL_PROPERTIES (ID TECH_ID NOT NULL,MATE_ID TECH_ID NOT NULL,MTPT_ID TECH_ID NOT NULL,VALUE TEXT_VALUE,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, PERS_ID_AUTHOR TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, PERS_ID_REGISTERER TECH_ID NOT NULL,CVTE_ID TECH_ID, MATE_PROP_ID TECH_ID); +CREATE TABLE MATERIAL_PROPERTIES_HISTORY (ID TECH_ID NOT NULL, MATE_ID TECH_ID NOT NULL, MTPT_ID TECH_ID NOT NULL, VALUE TEXT_VALUE, VOCABULARY_TERM IDENTIFIER, MATERIAL IDENTIFIER, PERS_ID_AUTHOR TECH_ID NOT NULL, VALID_FROM_TIMESTAMP TIME_STAMP NOT NULL, VALID_UNTIL_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE MATERIAL_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000,DBIN_ID TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, VALIDATION_SCRIPT_ID TECH_ID); +CREATE TABLE MATERIAL_TYPE_PROPERTY_TYPES (ID TECH_ID NOT NULL,MATY_ID TECH_ID NOT NULL,PRTY_ID TECH_ID NOT NULL,IS_MANDATORY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL, ORDINAL ORDINAL_INT NOT NULL, SECTION DESCRIPTION_2000,SCRIPT_ID TECH_ID,IS_SHOWN_EDIT BOOLEAN_CHAR NOT NULL DEFAULT 'T',SHOW_RAW_VALUE BOOLEAN_CHAR NOT NULL DEFAULT 'F'); +CREATE TABLE DATA_SET_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000,DBIN_ID TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, MAIN_DS_PATTERN VARCHAR(300), MAIN_DS_PATH VARCHAR(1000), DELETION_DISALLOW BOOLEAN_CHAR DEFAULT 'F', DATA_SET_KIND DATA_SET_KIND DEFAULT 'PHYSICAL' NOT NULL, VALIDATION_SCRIPT_ID TECH_ID); +CREATE TABLE PERSONS (ID TECH_ID NOT NULL,FIRST_NAME VARCHAR(30),LAST_NAME VARCHAR(30),USER_ID USER_ID NOT NULL,EMAIL OBJECT_NAME,DBIN_ID TECH_ID NOT NULL,SPACE_ID TECH_ID,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID, DISPLAY_SETTINGS FILE, IS_ACTIVE BOOLEAN DEFAULT TRUE); +CREATE TABLE PROJECTS (ID TECH_ID NOT NULL,PERM_ID CODE NOT NULL,CODE CODE NOT NULL,SPACE_ID TECH_ID NOT NULL,PERS_ID_LEADER TECH_ID,DESCRIPTION DESCRIPTION_2000,PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, PERS_ID_MODIFIER TECH_ID, VERSION INTEGER DEFAULT 0); +CREATE TABLE PROPERTY_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000 NOT NULL,LABEL COLUMN_LABEL NOT NULL,DATY_ID TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL,COVO_ID TECH_ID,IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_INTERNAL_NAMESPACE BOOLEAN_CHAR NOT NULL DEFAULT 'F',DBIN_ID TECH_ID NOT NULL, MATY_PROP_ID TECH_ID, SCHEMA TEXT_VALUE, TRANSFORMATION TEXT_VALUE); +CREATE TABLE ROLE_ASSIGNMENTS (ID TECH_ID NOT NULL,ROLE_CODE AUTHORIZATION_ROLE NOT NULL,SPACE_ID TECH_ID,DBIN_ID TECH_ID,PERS_ID_GRANTEE TECH_ID, AG_ID_GRANTEE TECH_ID, PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE SAMPLES_ALL (ID TECH_ID NOT NULL,PERM_ID CODE NOT NULL,CODE CODE NOT NULL,EXPE_ID TECH_ID,SATY_ID TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL,DEL_ID TECH_ID, ORIG_DEL TECH_ID, DBIN_ID TECH_ID,SPACE_ID TECH_ID,SAMP_ID_PART_OF TECH_ID, PERS_ID_MODIFIER TECH_ID, code_unique_check character varying(300), subcode_unique_check character varying(300), VERSION INTEGER DEFAULT 0); +CREATE TABLE SAMPLE_PROPERTIES (ID TECH_ID NOT NULL,SAMP_ID TECH_ID NOT NULL,STPT_ID TECH_ID NOT NULL,VALUE TEXT_VALUE,CVTE_ID TECH_ID,MATE_PROP_ID TECH_ID,PERS_ID_REGISTERER TECH_ID NOT NULL, REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, PERS_ID_AUTHOR TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE SAMPLE_PROPERTIES_HISTORY (ID TECH_ID NOT NULL, SAMP_ID TECH_ID NOT NULL, STPT_ID TECH_ID NOT NULL, VALUE TEXT_VALUE, VOCABULARY_TERM IDENTIFIER, MATERIAL IDENTIFIER, PERS_ID_AUTHOR TECH_ID NOT NULL, VALID_FROM_TIMESTAMP TIME_STAMP NOT NULL, VALID_UNTIL_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE SAMPLE_TYPES (ID TECH_ID NOT NULL,CODE CODE NOT NULL,DESCRIPTION DESCRIPTION_2000,DBIN_ID TECH_ID NOT NULL, IS_LISTABLE BOOLEAN_CHAR NOT NULL DEFAULT 'T', GENERATED_FROM_DEPTH INTEGER NOT NULL DEFAULT 0, PART_OF_DEPTH INTEGER NOT NULL DEFAULT 0, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, is_auto_generated_code BOOLEAN_CHAR NOT NULL DEFAULT 'F', generated_code_prefix CODE NOT NULL DEFAULT 'S', is_subcode_unique BOOLEAN_CHAR NOT NULL DEFAULT 'F', INHERIT_PROPERTIES BOOLEAN_CHAR NOT NULL DEFAULT 'F', VALIDATION_SCRIPT_ID TECH_ID, SHOW_PARENT_METADATA BOOLEAN_CHAR NOT NULL DEFAULT 'F'); +CREATE TABLE SAMPLE_TYPE_PROPERTY_TYPES (ID TECH_ID NOT NULL,SATY_ID TECH_ID NOT NULL,PRTY_ID TECH_ID NOT NULL,IS_MANDATORY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, IS_DISPLAYED BOOLEAN_CHAR NOT NULL DEFAULT 'T', ORDINAL ORDINAL_INT NOT NULL, SECTION DESCRIPTION_2000,SCRIPT_ID TECH_ID,IS_SHOWN_EDIT BOOLEAN_CHAR NOT NULL DEFAULT 'T',SHOW_RAW_VALUE BOOLEAN_CHAR NOT NULL DEFAULT 'F'); + +CREATE TABLE DATA_SET_PROPERTIES (ID TECH_ID NOT NULL,DS_ID TECH_ID NOT NULL,DSTPT_ID TECH_ID NOT NULL,VALUE TEXT_VALUE,CVTE_ID TECH_ID, MATE_PROP_ID TECH_ID, PERS_ID_REGISTERER TECH_ID NOT NULL, REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, PERS_ID_AUTHOR TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE DATA_SET_PROPERTIES_HISTORY (ID TECH_ID NOT NULL, DS_ID TECH_ID NOT NULL, DSTPT_ID TECH_ID NOT NULL, VALUE TEXT_VALUE, VOCABULARY_TERM IDENTIFIER, MATERIAL IDENTIFIER, PERS_ID_AUTHOR TECH_ID NOT NULL, VALID_FROM_TIMESTAMP TIME_STAMP NOT NULL, VALID_UNTIL_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE DATA_SET_TYPE_PROPERTY_TYPES (ID TECH_ID NOT NULL,DSTY_ID TECH_ID NOT NULL,PRTY_ID TECH_ID NOT NULL,IS_MANDATORY BOOLEAN_CHAR NOT NULL DEFAULT 'F',IS_MANAGED_INTERNALLY BOOLEAN_CHAR NOT NULL DEFAULT 'F',PERS_ID_REGISTERER TECH_ID NOT NULL,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, ORDINAL ORDINAL_INT NOT NULL, SECTION DESCRIPTION_2000,SCRIPT_ID TECH_ID, IS_SHOWN_EDIT BOOLEAN_CHAR NOT NULL DEFAULT 'T',SHOW_RAW_VALUE BOOLEAN_CHAR NOT NULL DEFAULT 'F'); + +CREATE TABLE AUTHORIZATION_GROUPS (ID TECH_ID NOT NULL, DBIN_ID TECH_ID NOT NULL, CODE CODE NOT NULL, DESCRIPTION DESCRIPTION_2000,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, PERS_ID_REGISTERER TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE AUTHORIZATION_GROUP_PERSONS (AG_ID TECH_ID NOT NULL, PERS_ID TECH_ID NOT NULL); + +CREATE TABLE FILTERS (ID TECH_ID NOT NULL, DBIN_ID TECH_ID NOT NULL, NAME VARCHAR(200) NOT NULL, DESCRIPTION DESCRIPTION_2000,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, PERS_ID_REGISTERER TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, EXPRESSION TEXT NOT NULL, IS_PUBLIC BOOLEAN NOT NULL, GRID_ID VARCHAR(200) NOT NULL); +CREATE TABLE QUERIES (ID TECH_ID NOT NULL, DBIN_ID TECH_ID NOT NULL, NAME VARCHAR(200) NOT NULL, DESCRIPTION DESCRIPTION_2000,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, PERS_ID_REGISTERER TECH_ID NOT NULL, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP, EXPRESSION TEXT NOT NULL, IS_PUBLIC BOOLEAN NOT NULL, QUERY_TYPE QUERY_TYPE NOT NULL, ENTITY_TYPE_CODE CODE, DB_KEY CODE NOT NULL DEFAULT '1'); + +CREATE TABLE relationship_types (id TECH_ID NOT NULL, code CODE NOT NULL, label COLUMN_LABEL, parent_label COLUMN_LABEL, child_label COLUMN_LABEL, description DESCRIPTION_2000, registration_timestamp TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, pers_id_registerer TECH_ID NOT NULL, is_managed_internally BOOLEAN_CHAR NOT NULL DEFAULT 'F', is_internal_namespace BOOLEAN_CHAR NOT NULL DEFAULT 'F', dbin_id TECH_ID NOT NULL); +CREATE TABLE sample_relationships_all (id TECH_ID NOT NULL, sample_id_parent TECH_ID NOT NULL, relationship_id TECH_ID NOT NULL, sample_id_child TECH_ID NOT NULL, del_id TECH_ID, PERS_ID_AUTHOR TECH_ID, REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MODIFICATION_TIMESTAMP TIME_STAMP DEFAULT CURRENT_TIMESTAMP); + +CREATE TABLE scripts (ID TECH_ID NOT NULL,DBIN_ID TECH_ID NOT NULL,NAME VARCHAR(200) NOT NULL, SCRIPT_TYPE SCRIPT_TYPE NOT NULL, DESCRIPTION DESCRIPTION_2000,SCRIPT TEXT_VALUE,REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP,PERS_ID_REGISTERER TECH_ID NOT NULL,ENTITY_KIND ENTITY_KIND, PLUGIN_TYPE PLUGIN_TYPE NOT NULL DEFAULT 'JYTHON', IS_AVAILABLE BOOLEAN_CHAR NOT NULL DEFAULT TRUE); + +CREATE TABLE CORE_PLUGINS (ID TECH_ID NOT NULL, NAME VARCHAR(200) NOT NULL, VERSION INTEGER NOT NULL, REGISTRATION_TIMESTAMP TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP, MASTER_REG_SCRIPT TEXT_VALUE); + +CREATE TABLE POST_REGISTRATION_DATASET_QUEUE (ID TECH_ID NOT NULL, DS_ID TECH_ID NOT NULL); + +CREATE TABLE ENTITY_OPERATIONS_LOG (ID TECH_ID NOT NULL, REGISTRATION_ID TECH_ID NOT NULL); + +CREATE TABLE PROJECT_RELATIONSHIPS_HISTORY (ID TECH_ID NOT NULL, MAIN_PROJ_ID TECH_ID NOT NULL, RELATION_TYPE TEXT_VALUE, EXPE_ID TECH_ID, SPACE_ID TECH_ID, ENTITY_PERM_ID TEXT_VALUE, PERS_ID_AUTHOR TECH_ID, VALID_FROM_TIMESTAMP TIME_STAMP NOT NULL, VALID_UNTIL_TIMESTAMP TIME_STAMP); +CREATE TABLE EXPERIMENT_RELATIONSHIPS_HISTORY (ID TECH_ID NOT NULL, MAIN_EXPE_ID TECH_ID NOT NULL, RELATION_TYPE TEXT_VALUE, SAMP_ID TECH_ID, DATA_ID TECH_ID, ENTITY_PERM_ID TEXT_VALUE, PERS_ID_AUTHOR TECH_ID, VALID_FROM_TIMESTAMP TIME_STAMP NOT NULL, VALID_UNTIL_TIMESTAMP TIME_STAMP, PROJ_ID TECH_ID); +CREATE TABLE SAMPLE_RELATIONSHIPS_HISTORY (ID TECH_ID NOT NULL, MAIN_SAMP_ID TECH_ID NOT NULL, RELATION_TYPE TEXT_VALUE, EXPE_ID TECH_ID, SAMP_ID TECH_ID, DATA_ID TECH_ID, ENTITY_PERM_ID TEXT_VALUE, PERS_ID_AUTHOR TECH_ID, VALID_FROM_TIMESTAMP TIME_STAMP NOT NULL, VALID_UNTIL_TIMESTAMP TIME_STAMP, SPACE_ID TECH_ID); +CREATE TABLE DATA_SET_RELATIONSHIPS_HISTORY (ID TECH_ID NOT NULL, MAIN_DATA_ID TECH_ID NOT NULL, RELATION_TYPE TEXT_VALUE, EXPE_ID TECH_ID, SAMP_ID TECH_ID, DATA_ID TECH_ID, ENTITY_PERM_ID TEXT_VALUE, PERS_ID_AUTHOR TECH_ID, VALID_FROM_TIMESTAMP TIME_STAMP NOT NULL, VALID_UNTIL_TIMESTAMP TIME_STAMP); + +CREATE TABLE EXTERNAL_DATA_MANAGEMENT_SYSTEMS (ID TECH_ID, DBIN_ID TECH_ID, CODE CODE, LABEL TEXT_VALUE, URL_TEMPLATE TEXT_VALUE, IS_OPENBIS BOOLEAN DEFAULT FALSE NOT NULL); +CREATE TABLE LINK_DATA (DATA_ID TECH_ID NOT NULL, EDMS_ID TECH_ID NOT NULL, EXTERNAL_CODE TEXT_VALUE NOT NULL); + +CREATE TABLE METAPROJECTS (ID TECH_ID NOT NULL, NAME CODE NOT NULL, DESCRIPTION DESCRIPTION_2000, OWNER TECH_ID NOT NULL, PRIVATE BOOLEAN_CHAR NOT NULL DEFAULT TRUE, CREATION_DATE TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP); +CREATE TABLE METAPROJECT_ASSIGNMENTS_ALL (ID TECH_ID NOT NULL, MEPR_ID TECH_ID NOT NULL, EXPE_ID TECH_ID, SAMP_ID TECH_ID, DATA_ID TECH_ID, MATE_ID TECH_ID, DEL_ID TECH_ID, CREATION_DATE TIME_STAMP_DFL NOT NULL DEFAULT CURRENT_TIMESTAMP); + +-- Creating views - copied from schema generated for tests, '*' can't be used because of PgDiffViews limitation in view comparison + +CREATE VIEW data AS + SELECT id, code, dsty_id, dast_id, expe_id, data_producer_code, production_timestamp, samp_id, registration_timestamp, pers_id_registerer, pers_id_modifier, is_placeholder, is_valid, modification_timestamp, is_derived, del_id, orig_del, version + FROM data_all + WHERE del_id IS NULL; + +CREATE VIEW data_deleted AS + SELECT id, code, dsty_id, dast_id, expe_id, data_producer_code, production_timestamp, samp_id, registration_timestamp, pers_id_registerer, pers_id_modifier, is_placeholder, is_valid, modification_timestamp, is_derived, del_id, orig_del, version + FROM data_all + WHERE del_id IS NOT NULL; + +CREATE VIEW experiments AS + SELECT id, perm_id, code, exty_id, pers_id_registerer, pers_id_modifier, registration_timestamp, modification_timestamp, proj_id, del_id, orig_del, is_public, version + FROM experiments_all + WHERE del_id IS NULL; + +CREATE VIEW experiments_deleted AS + SELECT id, perm_id, code, exty_id, pers_id_registerer, pers_id_modifier, registration_timestamp, modification_timestamp, proj_id, del_id, orig_del, is_public, version + FROM experiments_all + WHERE del_id IS NOT NULL; + +CREATE VIEW samples AS + SELECT id, perm_id, code, expe_id, saty_id, registration_timestamp, modification_timestamp, pers_id_registerer, pers_id_modifier, del_id, orig_del, dbin_id, space_id, samp_id_part_of, version + FROM samples_all + WHERE del_id IS NULL; + +CREATE VIEW samples_deleted AS + SELECT id, perm_id, code, expe_id, saty_id, registration_timestamp, modification_timestamp, pers_id_registerer, pers_id_modifier, del_id, orig_del, dbin_id, space_id, samp_id_part_of, version + FROM samples_all + WHERE del_id IS NOT NULL; + +CREATE VIEW data_set_relationships AS + SELECT data_id_parent, data_id_child, relationship_id, ordinal, del_id, pers_id_author, registration_timestamp, modification_timestamp + FROM data_set_relationships_all + WHERE del_id IS NULL; + +CREATE VIEW sample_relationships AS + SELECT id, sample_id_parent, relationship_id, sample_id_child, del_id, pers_id_author, registration_timestamp, modification_timestamp + FROM sample_relationships_all + WHERE del_id IS NULL; + +CREATE VIEW METAPROJECT_ASSIGNMENTS AS + SELECT ID, MEPR_ID, EXPE_ID, SAMP_ID, DATA_ID, MATE_ID, DEL_ID, CREATION_DATE + FROM METAPROJECT_ASSIGNMENTS_ALL + WHERE DEL_ID IS NULL; + +CREATE VIEW sample_history_view AS ( + SELECT + 2*id as id, + main_samp_id, + relation_type, + space_id, + expe_id, + samp_id, + data_id, + entity_perm_id, + null as stpt_id, + null as value, + null as vocabulary_term, + null as material, + pers_id_author, + valid_from_timestamp, + valid_until_timestamp + FROM + SAMPLE_RELATIONSHIPS_HISTORY + WHERE + valid_until_timestamp IS NOT NULL) +UNION + SELECT + 2*id+1 as id, + samp_id as main_samp_id, + null as relation_type, + null as space_id, + null as expe_id, + null as samp_id, + null as data_id, + null as entity_perm_id, + stpt_id, + value, + vocabulary_term, + material, + pers_id_author, + valid_from_timestamp, + valid_until_timestamp + FROM + SAMPLE_PROPERTIES_HISTORY; + +CREATE VIEW data_set_history_view AS ( + SELECT + 2*id as id, + main_data_id, + relation_type, + expe_id, + samp_id, + data_id, + entity_perm_id, + null as dstpt_id, + null as value, + null as vocabulary_term, + null as material, + pers_id_author, + valid_from_timestamp, + valid_until_timestamp + FROM + DATA_SET_RELATIONSHIPS_HISTORY + WHERE + valid_until_timestamp IS NOT NULL) +UNION + SELECT + 2*id+1 as id, + ds_id as main_data_id, + null as relation_type, + null as expe_id, + null as samp_id, + null as data_id, + null as entity_perm_id, + dstpt_id, + value, + vocabulary_term, + material, + pers_id_author, + valid_from_timestamp, + valid_until_timestamp + FROM + DATA_SET_PROPERTIES_HISTORY; + +CREATE VIEW experiment_history_view AS ( + SELECT + 2*id as id, + main_expe_id, + relation_type, + proj_id, + samp_id, + data_id, + entity_perm_id, + null as etpt_id, + null as value, + null as vocabulary_term, + null as material, + pers_id_author, + valid_from_timestamp, + valid_until_timestamp + FROM + EXPERIMENT_RELATIONSHIPS_HISTORY + WHERE valid_until_timestamp IS NOT NULL) +UNION + SELECT + 2*id+1 as id, + expe_id as main_expe_id, + null as relation_type, + null as proj_id, + null as samp_id, + null as data_id, + null as entity_perm_id, + etpt_id, + value, + vocabulary_term, + material, + pers_id_author, + valid_from_timestamp, + valid_until_timestamp + FROM + EXPERIMENT_PROPERTIES_HISTORY; + +-- Creating sequences + +CREATE SEQUENCE CONTROLLED_VOCABULARY_ID_SEQ; +CREATE SEQUENCE CVTE_ID_SEQ; +CREATE SEQUENCE DATABASE_INSTANCE_ID_SEQ; +CREATE SEQUENCE DATA_ID_SEQ; +CREATE SEQUENCE DATA_SET_RELATIONSHIP_ID_SEQ; +CREATE SEQUENCE DATA_STORE_ID_SEQ; +CREATE SEQUENCE DATA_STORE_SERVICES_ID_SEQ; +CREATE SEQUENCE DATA_TYPE_ID_SEQ; +CREATE SEQUENCE ETPT_ID_SEQ; +CREATE SEQUENCE EVENT_ID_SEQ; +CREATE SEQUENCE ATTACHMENT_ID_SEQ; +CREATE SEQUENCE ATTACHMENT_CONTENT_ID_SEQ; +CREATE SEQUENCE EXPERIMENT_ID_SEQ; +CREATE SEQUENCE EXPERIMENT_PROPERTY_ID_SEQ; +CREATE SEQUENCE EXPERIMENT_TYPE_ID_SEQ; +CREATE SEQUENCE FILE_FORMAT_TYPE_ID_SEQ; +CREATE SEQUENCE SPACE_ID_SEQ; +CREATE SEQUENCE DELETION_ID_SEQ; +CREATE SEQUENCE LOCATOR_TYPE_ID_SEQ; +CREATE SEQUENCE MATERIAL_ID_SEQ; +CREATE SEQUENCE MATERIAL_PROPERTY_ID_SEQ; +CREATE SEQUENCE MATERIAL_TYPE_ID_SEQ; +CREATE SEQUENCE MTPT_ID_SEQ; +CREATE SEQUENCE DATA_SET_TYPE_ID_SEQ; +CREATE SEQUENCE PERSON_ID_SEQ; +CREATE SEQUENCE PROJECT_ID_SEQ; +CREATE SEQUENCE PROPERTY_TYPE_ID_SEQ; +CREATE SEQUENCE ROLE_ASSIGNMENT_ID_SEQ; +CREATE SEQUENCE SAMPLE_ID_SEQ; +CREATE SEQUENCE SAMPLE_PROPERTY_ID_SEQ; +CREATE SEQUENCE SAMPLE_TYPE_ID_SEQ; +CREATE SEQUENCE STPT_ID_SEQ; +CREATE SEQUENCE DATA_SET_PROPERTY_ID_SEQ; +CREATE SEQUENCE DSTPT_ID_SEQ; +CREATE SEQUENCE CODE_SEQ; +CREATE SEQUENCE EXPERIMENT_CODE_SEQ; +CREATE SEQUENCE SAMPLE_CODE_SEQ; +CREATE SEQUENCE PERM_ID_SEQ; +CREATE SEQUENCE AUTHORIZATION_GROUP_ID_SEQ; +CREATE SEQUENCE FILTER_ID_SEQ; +CREATE SEQUENCE GRID_CUSTOM_COLUMNS_ID_SEQ; +CREATE SEQUENCE QUERY_ID_SEQ; +CREATE SEQUENCE RELATIONSHIP_TYPE_ID_SEQ; +CREATE SEQUENCE SAMPLE_RELATIONSHIP_ID_SEQ; +CREATE SEQUENCE SCRIPT_ID_SEQ; +CREATE SEQUENCE CORE_PLUGIN_ID_SEQ; +CREATE SEQUENCE POST_REGISTRATION_DATASET_QUEUE_ID_SEQ; +CREATE SEQUENCE ENTITY_OPERATIONS_LOG_ID_SEQ; +CREATE SEQUENCE EXPERIMENT_RELATIONSHIPS_HISTORY_ID_SEQ; +CREATE SEQUENCE SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ; +CREATE SEQUENCE DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ; +CREATE SEQUENCE PROJECT_RELATIONSHIPS_HISTORY_ID_SEQ; +CREATE SEQUENCE EXTERNAL_DATA_MANAGEMENT_SYSTEM_ID_SEQ; +CREATE SEQUENCE METAPROJECT_ID_SEQ; +CREATE SEQUENCE METAPROJECT_ASSIGNMENT_ID_SEQ; + +-- Creating primary key constraints + +ALTER TABLE CONTROLLED_VOCABULARIES ADD CONSTRAINT COVO_PK PRIMARY KEY(ID); +ALTER TABLE CONTROLLED_VOCABULARY_TERMS ADD CONSTRAINT CVTE_PK PRIMARY KEY(ID); +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_PK PRIMARY KEY(ID); +ALTER TABLE DATABASE_INSTANCES ADD CONSTRAINT DBIN_PK PRIMARY KEY(ID); +ALTER TABLE DATA_STORES ADD CONSTRAINT DAST_PK PRIMARY KEY(ID); +ALTER TABLE DATA_STORE_SERVICES ADD CONSTRAINT DSSE_PK PRIMARY KEY(ID); +ALTER TABLE DATA_TYPES ADD CONSTRAINT DATY_PK PRIMARY KEY(ID); +ALTER TABLE EVENTS ADD CONSTRAINT EVNT_PK PRIMARY KEY(ID); +ALTER TABLE EXPERIMENTS_ALL ADD CONSTRAINT EXPE_PK PRIMARY KEY(ID); +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_PK PRIMARY KEY(ID); +ALTER TABLE ATTACHMENT_CONTENTS ADD CONSTRAINT EXAC_PK PRIMARY KEY(ID); +ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_PK PRIMARY KEY(ID); +ALTER TABLE EXPERIMENT_PROPERTIES_HISTORY ADD CONSTRAINT EXPRH_PK PRIMARY KEY(ID); +ALTER TABLE EXPERIMENT_TYPES ADD CONSTRAINT EXTY_PK PRIMARY KEY(ID); +ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_PK PRIMARY KEY(ID); +ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_PK PRIMARY KEY(DATA_ID); +ALTER TABLE FILE_FORMAT_TYPES ADD CONSTRAINT FFTY_PK PRIMARY KEY(ID); +ALTER TABLE SPACES ADD CONSTRAINT SPACE_PK PRIMARY KEY(ID); +ALTER TABLE DELETIONS ADD CONSTRAINT DEL_PK PRIMARY KEY(ID); +ALTER TABLE LOCATOR_TYPES ADD CONSTRAINT LOTY_PK PRIMARY KEY(ID); +ALTER TABLE MATERIALS ADD CONSTRAINT MATE_PK PRIMARY KEY(ID); +ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_PK PRIMARY KEY(ID); +ALTER TABLE MATERIAL_PROPERTIES_HISTORY ADD CONSTRAINT MAPRH_PK PRIMARY KEY(ID); +ALTER TABLE MATERIAL_TYPES ADD CONSTRAINT MATY_PK PRIMARY KEY(ID); +ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_PK PRIMARY KEY(ID); +ALTER TABLE DATA_SET_TYPES ADD CONSTRAINT DSTY_PK PRIMARY KEY(ID); +ALTER TABLE PERSONS ADD CONSTRAINT PERS_PK PRIMARY KEY(ID); +ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_PK PRIMARY KEY(ID); +ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_PK PRIMARY KEY(ID); +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_PK PRIMARY KEY(ID); +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_PK PRIMARY KEY(ID); +ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_PK PRIMARY KEY(ID); +ALTER TABLE SAMPLE_PROPERTIES_HISTORY ADD CONSTRAINT SAPRH_PK PRIMARY KEY(ID); +ALTER TABLE SAMPLE_TYPES ADD CONSTRAINT SATY_PK PRIMARY KEY(ID); +ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_PK PRIMARY KEY(ID); +ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_PK PRIMARY KEY(ID); +ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_PK PRIMARY KEY(ID); +ALTER TABLE DATA_SET_PROPERTIES_HISTORY ADD CONSTRAINT DSPRH_PK PRIMARY KEY(ID); +ALTER TABLE AUTHORIZATION_GROUPS ADD CONSTRAINT AG_PK PRIMARY KEY(ID); +ALTER TABLE AUTHORIZATION_GROUP_PERSONS ADD CONSTRAINT AGP_PK PRIMARY KEY(PERS_ID,AG_ID); +ALTER TABLE FILTERS ADD CONSTRAINT FILT_PK PRIMARY KEY(ID); +ALTER TABLE GRID_CUSTOM_COLUMNS ADD CONSTRAINT GRID_CUSTOM_COLUMNS_PK PRIMARY KEY(ID); +ALTER TABLE QUERIES ADD CONSTRAINT QUER_PK PRIMARY KEY(ID); +ALTER TABLE relationship_types ADD CONSTRAINT rety_pk PRIMARY KEY (id); +ALTER TABLE sample_relationships_all ADD CONSTRAINT sare_pk PRIMARY KEY (id); +ALTER TABLE SCRIPTS ADD CONSTRAINT SCRI_PK PRIMARY KEY(ID); +ALTER TABLE POST_REGISTRATION_DATASET_QUEUE ADD CONSTRAINT PRDQ_PK PRIMARY KEY(ID); +ALTER TABLE ENTITY_OPERATIONS_LOG ADD CONSTRAINT EOL_PK PRIMARY KEY(ID); +ALTER TABLE EXPERIMENT_RELATIONSHIPS_HISTORY ADD CONSTRAINT EXRELH_PK PRIMARY KEY(ID); +ALTER TABLE SAMPLE_RELATIONSHIPS_HISTORY ADD CONSTRAINT SAMPRELH_PK PRIMARY KEY(ID); +ALTER TABLE DATA_SET_RELATIONSHIPS_HISTORY ADD CONSTRAINT DATARELH_PK PRIMARY KEY(ID); +ALTER TABLE PROJECT_RELATIONSHIPS_HISTORY ADD CONSTRAINT PRRELH_PK PRIMARY KEY(ID); +ALTER TABLE EXTERNAL_DATA_MANAGEMENT_SYSTEMS ADD CONSTRAINT EDMS_PK PRIMARY KEY(ID); +ALTER TABLE LINK_DATA ADD CONSTRAINT LNDA_PK PRIMARY KEY(DATA_ID); +ALTER TABLE METAPROJECTS ADD CONSTRAINT METAPROJECTS_PK PRIMARY KEY(ID); +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_PK PRIMARY KEY(ID); + +-- Creating unique constraints + +ALTER TABLE CONTROLLED_VOCABULARIES ADD CONSTRAINT COVO_BK_UK UNIQUE(CODE,IS_INTERNAL_NAMESPACE,DBIN_ID); +ALTER TABLE CONTROLLED_VOCABULARY_TERMS ADD CONSTRAINT CVTE_BK_UK UNIQUE(CODE,COVO_ID); +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_BK_UK UNIQUE(CODE); +ALTER TABLE DATABASE_INSTANCES ADD CONSTRAINT DBIN_BK_UK UNIQUE(CODE); +ALTER TABLE DATABASE_INSTANCES ADD CONSTRAINT DBIN_UUID_UK UNIQUE(UUID); +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD CONSTRAINT DSRE_BK_UK UNIQUE(DATA_ID_CHILD,DATA_ID_PARENT,RELATIONSHIP_ID); +ALTER TABLE DATA_STORE_SERVICES ADD CONSTRAINT DSSE_BK_UK UNIQUE(KEY, DATA_STORE_ID); +ALTER TABLE DATA_STORE_SERVICE_DATA_SET_TYPES ADD CONSTRAINT DSSDST_BK_UK UNIQUE(DATA_STORE_SERVICE_ID, DATA_SET_TYPE_ID); +ALTER TABLE DATA_STORES ADD CONSTRAINT DAST_BK_UK UNIQUE(CODE,DBIN_ID); +ALTER TABLE DATA_TYPES ADD CONSTRAINT DATY_BK_UK UNIQUE(CODE); +ALTER TABLE EXPERIMENTS_ALL ADD CONSTRAINT EXPE_BK_UK UNIQUE(CODE,PROJ_ID); +ALTER TABLE EXPERIMENTS_ALL ADD CONSTRAINT EXPE_PI_UK UNIQUE(PERM_ID); +ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_BK_UK UNIQUE(EXPE_ID,ETPT_ID); +ALTER TABLE EXPERIMENT_TYPES ADD CONSTRAINT EXTY_BK_UK UNIQUE(CODE,DBIN_ID); +ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_BK_UK UNIQUE(EXTY_ID,PRTY_ID); +ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_BK_UK UNIQUE(LOCATION,LOTY_ID); +ALTER TABLE FILE_FORMAT_TYPES ADD CONSTRAINT FFTY_BK_UK UNIQUE(CODE,DBIN_ID); +ALTER TABLE SPACES ADD CONSTRAINT SPACE_BK_UK UNIQUE(CODE,DBIN_ID); +ALTER TABLE LOCATOR_TYPES ADD CONSTRAINT LOTY_BK_UK UNIQUE(CODE); +ALTER TABLE MATERIALS ADD CONSTRAINT MATE_BK_UK UNIQUE(CODE,MATY_ID,DBIN_ID); +ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_BK_UK UNIQUE(MATE_ID,MTPT_ID); +ALTER TABLE MATERIAL_TYPES ADD CONSTRAINT MATY_BK_UK UNIQUE(CODE,DBIN_ID); +ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_BK_UK UNIQUE(MATY_ID,PRTY_ID); +ALTER TABLE DATA_SET_TYPES ADD CONSTRAINT DSTY_BK_UK UNIQUE(CODE,DBIN_ID); +ALTER TABLE PERSONS ADD CONSTRAINT PERS_BK_UK UNIQUE(DBIN_ID,USER_ID); +ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_BK_UK UNIQUE(CODE,SPACE_ID); +ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_PI_UK UNIQUE(PERM_ID); +ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_BK_UK UNIQUE(CODE,IS_INTERNAL_NAMESPACE,DBIN_ID); +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_PE_SPACE_BK_UK UNIQUE(PERS_ID_GRANTEE,ROLE_CODE,SPACE_ID); +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_PE_INSTANCE_BK_UK UNIQUE(PERS_ID_GRANTEE,ROLE_CODE,DBIN_ID); +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_AG_SPACE_BK_UK UNIQUE(AG_ID_GRANTEE,ROLE_CODE,SPACE_ID); +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_AG_INSTANCE_BK_UK UNIQUE(AG_ID_GRANTEE,ROLE_CODE,DBIN_ID); +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_PI_UK UNIQUE(PERM_ID); +ALTER TABLE samples_all ADD CONSTRAINT samp_code_unique_check_uk UNIQUE(code_unique_check); +ALTER TABLE samples_all ADD CONSTRAINT samp_subcode_unique_check_uk UNIQUE(subcode_unique_check); +ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_BK_UK UNIQUE(SAMP_ID,STPT_ID); +ALTER TABLE SAMPLE_TYPES ADD CONSTRAINT SATY_BK_UK UNIQUE(CODE,DBIN_ID); +ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_BK_UK UNIQUE(SATY_ID,PRTY_ID); +ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_BK_UK UNIQUE(DSTY_ID,PRTY_ID); +ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_BK_UK UNIQUE(DS_ID,DSTPT_ID); +-- NOTE: following uniqueness constraints for attachments work, because (null != null) in Postgres +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_EXPE_BK_UK UNIQUE(EXPE_ID,FILE_NAME,VERSION); +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_PROJ_BK_UK UNIQUE(PROJ_ID,FILE_NAME,VERSION); +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_SAMP_BK_UK UNIQUE(SAMP_ID,FILE_NAME,VERSION); +ALTER TABLE AUTHORIZATION_GROUPS ADD CONSTRAINT AG_BK_UK UNIQUE(CODE,DBIN_ID); +ALTER TABLE FILTERS ADD CONSTRAINT FILT_BK_UK UNIQUE(NAME, DBIN_ID, GRID_ID); +ALTER TABLE GRID_CUSTOM_COLUMNS ADD CONSTRAINT GRID_CUSTOM_COLUMNS_BK_UK UNIQUE(CODE, DBIN_ID, GRID_ID); +ALTER TABLE QUERIES ADD CONSTRAINT QUER_BK_UK UNIQUE(NAME, DBIN_ID); +ALTER TABLE sample_relationships_all ADD CONSTRAINT sare_bk_uk UNIQUE(sample_id_child,sample_id_parent,relationship_id); +ALTER TABLE relationship_types ADD CONSTRAINT rety_uk UNIQUE(code,dbin_id); +ALTER TABLE SCRIPTS ADD CONSTRAINT SCRI_UK UNIQUE(NAME,DBIN_ID); +ALTER TABLE CORE_PLUGINS ADD CONSTRAINT COPL_NAME_VER_UK UNIQUE(NAME,VERSION); +ALTER TABLE ENTITY_OPERATIONS_LOG ADD CONSTRAINT EOL_REG_ID_UK UNIQUE(REGISTRATION_ID); +ALTER TABLE EXTERNAL_DATA_MANAGEMENT_SYSTEMS ADD CONSTRAINT EDMS_CODE_UK UNIQUE(CODE, DBIN_ID); +-- NOTE: following uniqueness constraints for metaproject assignments work, because (null != null) in Postgres +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_MEPR_ID_EXPE_ID_UK UNIQUE (MEPR_ID, EXPE_ID); +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_MEPR_ID_SAMP_ID_UK UNIQUE (MEPR_ID, SAMP_ID); +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_MEPR_ID_DATA_ID_UK UNIQUE (MEPR_ID, DATA_ID); +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_MEPR_ID_MATE_ID_UK UNIQUE (MEPR_ID, MATE_ID); + +-- Creating foreign key constraints + +ALTER TABLE CONTROLLED_VOCABULARIES ADD CONSTRAINT COVO_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE CONTROLLED_VOCABULARIES ADD CONSTRAINT COVO_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE CONTROLLED_VOCABULARY_TERMS ADD CONSTRAINT CVTE_COVO_FK FOREIGN KEY (COVO_ID) REFERENCES CONTROLLED_VOCABULARIES(ID); +ALTER TABLE CONTROLLED_VOCABULARY_TERMS ADD CONSTRAINT CVTE_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_DSTY_FK FOREIGN KEY (DSTY_ID) REFERENCES DATA_SET_TYPES(ID); +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID); +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES_ALL(ID); +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_DAST_FK FOREIGN KEY (DAST_ID) REFERENCES DATA_STORES(ID); +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_DEL_FK FOREIGN KEY (DEL_ID) REFERENCES DELETIONS(ID); +ALTER TABLE DATA_ALL ADD CONSTRAINT DATA_PERS_FK_MOD FOREIGN KEY (PERS_ID_MODIFIER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD CONSTRAINT DSRE_DATA_FK_CHILD FOREIGN KEY (DATA_ID_CHILD) REFERENCES DATA_ALL(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD CONSTRAINT DSRE_DATA_FK_PARENT FOREIGN KEY (DATA_ID_PARENT) REFERENCES DATA_ALL(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD CONSTRAINT DSRE_DATA_FK_RELATIONSHIP FOREIGN KEY (RELATIONSHIP_ID) REFERENCES RELATIONSHIP_TYPES(ID); +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD CONSTRAINT DSRE_DEL_FK FOREIGN KEY (DEL_ID) REFERENCES DELETIONS(ID); +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD CONSTRAINT DATA_SET_RELATIONSHIPS_PERS_FK FOREIGN KEY (PERS_ID_AUTHOR) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE sample_relationships_all ADD CONSTRAINT sare_data_fk_child FOREIGN KEY (sample_id_child) REFERENCES SAMPLES_ALL(id) ON DELETE CASCADE; +ALTER TABLE sample_relationships_all ADD CONSTRAINT sare_data_fk_parent FOREIGN KEY (sample_id_parent) REFERENCES SAMPLES_ALL(id) ON DELETE CASCADE; +ALTER TABLE sample_relationships_all ADD CONSTRAINT sare_data_fk_relationship FOREIGN KEY (relationship_id) REFERENCES relationship_types(id); +ALTER TABLE sample_relationships_all ADD CONSTRAINT sare_del_fk FOREIGN KEY (del_id) REFERENCES deletions(id); +ALTER TABLE SAMPLE_RELATIONSHIPS_ALL ADD CONSTRAINT SAMPLE_RELATIONSHIPS_PERS_FK FOREIGN KEY (PERS_ID_AUTHOR) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE DATA_STORES ADD CONSTRAINT DAST_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE DATA_STORE_SERVICES ADD CONSTRAINT DSSE_DS_FK FOREIGN KEY (DATA_STORE_ID) REFERENCES DATA_STORES(ID) ON DELETE CASCADE; +ALTER TABLE DATA_STORE_SERVICE_DATA_SET_TYPES ADD CONSTRAINT DSSDST_DS_FK FOREIGN KEY (DATA_STORE_SERVICE_ID) REFERENCES DATA_STORE_SERVICES(ID) ON DELETE CASCADE; +ALTER TABLE DATA_STORE_SERVICE_DATA_SET_TYPES ADD CONSTRAINT DSSDST_DST_FK FOREIGN KEY (DATA_SET_TYPE_ID) REFERENCES DATA_SET_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE EVENTS ADD CONSTRAINT EVNT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE EXPERIMENTS_ALL ADD CONSTRAINT EXPE_EXTY_FK FOREIGN KEY (EXTY_ID) REFERENCES EXPERIMENT_TYPES(ID); +ALTER TABLE EXPERIMENTS_ALL ADD CONSTRAINT EXPE_DEL_FK FOREIGN KEY (DEL_ID) REFERENCES DELETIONS(ID); +ALTER TABLE EXPERIMENTS_ALL ADD CONSTRAINT EXPE_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE EXPERIMENTS_ALL ADD CONSTRAINT EXPE_PROJ_FK FOREIGN KEY (PROJ_ID) REFERENCES PROJECTS(ID); +ALTER TABLE EXPERIMENTS_ALL ADD CONSTRAINT EXPE_PERS_FK_MOD FOREIGN KEY (PERS_ID_MODIFIER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID); +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_PROJ_FK FOREIGN KEY (PROJ_ID) REFERENCES PROJECTS(ID); +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES_ALL(ID); +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_CONT_FK FOREIGN KEY (EXAC_ID) REFERENCES ATTACHMENT_CONTENTS(ID); +ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_CVTE_FK FOREIGN KEY (CVTE_ID) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID); +ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_ETPT_FK FOREIGN KEY (ETPT_ID) REFERENCES EXPERIMENT_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID); +ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_MAPR_FK FOREIGN KEY (MATE_PROP_ID) REFERENCES MATERIALS(ID); +ALTER TABLE EXPERIMENT_PROPERTIES_HISTORY ADD CONSTRAINT EXPRH_ETPT_FK FOREIGN KEY (ETPT_ID) REFERENCES EXPERIMENT_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE EXPERIMENT_PROPERTIES_HISTORY ADD CONSTRAINT EXPRH_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID) ON DELETE CASCADE; +ALTER TABLE EXPERIMENT_TYPES ADD CONSTRAINT EXTY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE EXPERIMENT_TYPES ADD CONSTRAINT EXTY_SCRIPT_FK FOREIGN KEY (VALIDATION_SCRIPT_ID) REFERENCES SCRIPTS(ID); +ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_EXTY_FK FOREIGN KEY (EXTY_ID) REFERENCES EXPERIMENT_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_PRTY_FK FOREIGN KEY (PRTY_ID) REFERENCES PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_CVTE_FK FOREIGN KEY (CVTE_ID_STOR_FMT) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID); +ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_CVTE_STORED_ON_FK FOREIGN KEY (CVTE_ID_STORE) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID); +ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_DATA_FK FOREIGN KEY (DATA_ID) REFERENCES DATA_ALL(ID); +ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_FFTY_FK FOREIGN KEY (FFTY_ID) REFERENCES FILE_FORMAT_TYPES(ID); +ALTER TABLE EXTERNAL_DATA ADD CONSTRAINT EXDA_LOTY_FK FOREIGN KEY (LOTY_ID) REFERENCES LOCATOR_TYPES(ID); +ALTER TABLE FILE_FORMAT_TYPES ADD CONSTRAINT FFTY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE SPACES ADD CONSTRAINT SPACE_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE SPACES ADD CONSTRAINT SPACE_PERS_FK_REGISTERER FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE DELETIONS ADD CONSTRAINT DEL_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE MATERIALS ADD CONSTRAINT MATE_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE MATERIALS ADD CONSTRAINT MATE_MATY_FK FOREIGN KEY (MATY_ID) REFERENCES MATERIAL_TYPES(ID); +ALTER TABLE MATERIALS ADD CONSTRAINT MATE_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_CVTE_FK FOREIGN KEY (CVTE_ID) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID); +ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_MAPR_FK FOREIGN KEY (MATE_PROP_ID) REFERENCES MATERIALS(ID); +ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_MATE_FK FOREIGN KEY (MATE_ID) REFERENCES MATERIALS(ID); +ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_MTPT_FK FOREIGN KEY (MTPT_ID) REFERENCES MATERIAL_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE MATERIAL_PROPERTIES_HISTORY ADD CONSTRAINT MAPRH_MATE_FK FOREIGN KEY (MATE_ID) REFERENCES MATERIALS(ID) ON DELETE CASCADE; +ALTER TABLE MATERIAL_PROPERTIES_HISTORY ADD CONSTRAINT MAPRH_MTPT_FK FOREIGN KEY (MTPT_ID) REFERENCES MATERIAL_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE MATERIAL_TYPES ADD CONSTRAINT MATY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE MATERIAL_TYPES ADD CONSTRAINT MATY_SCRIPT_FK FOREIGN KEY (VALIDATION_SCRIPT_ID) REFERENCES SCRIPTS(ID); +ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_MATY_FK FOREIGN KEY (MATY_ID) REFERENCES MATERIAL_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_PRTY_FK FOREIGN KEY (PRTY_ID) REFERENCES PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_TYPES ADD CONSTRAINT DSTY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE DATA_SET_TYPES ADD CONSTRAINT DSTY_SCRIPT_FK FOREIGN KEY (VALIDATION_SCRIPT_ID) REFERENCES SCRIPTS(ID); +ALTER TABLE PERSONS ADD CONSTRAINT PERS_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE PERSONS ADD CONSTRAINT PERS_SPACE_FK FOREIGN KEY (SPACE_ID) REFERENCES SPACES(ID); +ALTER TABLE PERSONS ADD CONSTRAINT PERS_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_SPACE_FK FOREIGN KEY (SPACE_ID) REFERENCES SPACES(ID); +ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_PERS_FK_LEADER FOREIGN KEY (PERS_ID_LEADER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_PERS_FK_REGISTERER FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE PROJECTS ADD CONSTRAINT PROJ_PERS_FK_MOD FOREIGN KEY (PERS_ID_MODIFIER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_COVO_FK FOREIGN KEY (COVO_ID) REFERENCES CONTROLLED_VOCABULARIES(ID); +ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_DATY_FK FOREIGN KEY (DATY_ID) REFERENCES DATA_TYPES(ID); +ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE PROPERTY_TYPES ADD CONSTRAINT PRTY_MATY_FK FOREIGN KEY (MATY_PROP_ID) REFERENCES MATERIAL_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID) ON DELETE CASCADE; +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_SPACE_FK FOREIGN KEY (SPACE_ID) REFERENCES SPACES(ID) ON DELETE CASCADE; +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_PERS_FK_GRANTEE FOREIGN KEY (PERS_ID_GRANTEE) REFERENCES PERSONS(ID) ON DELETE CASCADE DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_AG_FK_GRANTEE FOREIGN KEY (AG_ID_GRANTEE) REFERENCES AUTHORIZATION_GROUPS(ID) ON DELETE CASCADE; +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_PERS_FK_REGISTERER FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_SPACE_FK FOREIGN KEY (SPACE_ID) REFERENCES SPACES(ID); +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_DEL_FK FOREIGN KEY (DEL_ID) REFERENCES DELETIONS(ID); +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_SAMP_FK_PART_OF FOREIGN KEY (SAMP_ID_PART_OF) REFERENCES SAMPLES_ALL(ID); +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID); +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_SATY_FK FOREIGN KEY (SATY_ID) REFERENCES SAMPLE_TYPES(ID); +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_PERS_FK_MOD FOREIGN KEY (PERS_ID_MODIFIER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_CVTE_FK FOREIGN KEY (CVTE_ID) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID); +ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_MAPR_FK FOREIGN KEY (MATE_PROP_ID) REFERENCES MATERIALS(ID); +ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES_ALL(ID); +ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_STPT_FK FOREIGN KEY (STPT_ID) REFERENCES SAMPLE_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE SAMPLE_PROPERTIES_HISTORY ADD CONSTRAINT SAPRH_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES_ALL(ID) ON DELETE CASCADE; +ALTER TABLE SAMPLE_PROPERTIES_HISTORY ADD CONSTRAINT SAPRH_STPT_FK FOREIGN KEY (STPT_ID) REFERENCES SAMPLE_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE SAMPLE_TYPES ADD CONSTRAINT SATY_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE SAMPLE_TYPES ADD CONSTRAINT SATY_SCRIPT_FK FOREIGN KEY (VALIDATION_SCRIPT_ID) REFERENCES SCRIPTS(ID); +ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_PRTY_FK FOREIGN KEY (PRTY_ID) REFERENCES PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_SATY_FK FOREIGN KEY (SATY_ID) REFERENCES SAMPLE_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_DSTY_FK FOREIGN KEY (DSTY_ID) REFERENCES DATA_SET_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_PRTY_FK FOREIGN KEY (PRTY_ID) REFERENCES PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_CVTE_FK FOREIGN KEY (CVTE_ID) REFERENCES CONTROLLED_VOCABULARY_TERMS(ID); +ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_DSTPT_FK FOREIGN KEY (DSTPT_ID) REFERENCES DATA_SET_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_DS_FK FOREIGN KEY (DS_ID) REFERENCES DATA_ALL(ID); +ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_MAPR_FK FOREIGN KEY (MATE_PROP_ID) REFERENCES MATERIALS(ID); +ALTER TABLE DATA_SET_PROPERTIES_HISTORY ADD CONSTRAINT DSPRH_DSTPT_FK FOREIGN KEY (DSTPT_ID) REFERENCES DATA_SET_TYPE_PROPERTY_TYPES(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_PROPERTIES_HISTORY ADD CONSTRAINT DSPRH_DS_FK FOREIGN KEY (DS_ID) REFERENCES DATA_ALL(ID) ON DELETE CASCADE; +ALTER TABLE AUTHORIZATION_GROUPS ADD CONSTRAINT AG_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE AUTHORIZATION_GROUP_PERSONS ADD CONSTRAINT AGP_AG_FK FOREIGN KEY (AG_ID) REFERENCES AUTHORIZATION_GROUPS(ID); +ALTER TABLE AUTHORIZATION_GROUP_PERSONS ADD CONSTRAINT AGP_PERS_FK FOREIGN KEY (PERS_ID) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE AUTHORIZATION_GROUPS ADD CONSTRAINT AG_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; + +ALTER TABLE FILTERS ADD CONSTRAINT FILT_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE FILTERS ADD CONSTRAINT FILT_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE GRID_CUSTOM_COLUMNS ADD CONSTRAINT GRID_CUSTOM_COLUMNS_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE GRID_CUSTOM_COLUMNS ADD CONSTRAINT GRID_CUSTOM_COLUMNS_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE QUERIES ADD CONSTRAINT QUER_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE QUERIES ADD CONSTRAINT QUER_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); + +ALTER TABLE SCRIPTS ADD CONSTRAINT SCRI_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE SCRIPTS ADD CONSTRAINT SCRI_PERS_FK FOREIGN KEY (PERS_ID_REGISTERER) REFERENCES PERSONS(ID) DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE MATERIAL_TYPE_PROPERTY_TYPES ADD CONSTRAINT MTPT_SCRIPT_FK FOREIGN KEY (SCRIPT_ID) REFERENCES SCRIPTS(ID); +ALTER TABLE SAMPLE_TYPE_PROPERTY_TYPES ADD CONSTRAINT STPT_SCRIPT_FK FOREIGN KEY (SCRIPT_ID) REFERENCES SCRIPTS(ID); +ALTER TABLE EXPERIMENT_TYPE_PROPERTY_TYPES ADD CONSTRAINT ETPT_SCRIPT_FK FOREIGN KEY (SCRIPT_ID) REFERENCES SCRIPTS(ID); +ALTER TABLE DATA_SET_TYPE_PROPERTY_TYPES ADD CONSTRAINT DSTPT_SCRIPT_FK FOREIGN KEY (SCRIPT_ID) REFERENCES SCRIPTS(ID); +ALTER TABLE ONLY POST_REGISTRATION_DATASET_QUEUE ADD CONSTRAINT prdq_ds_fk FOREIGN KEY (ds_id) REFERENCES data_all(id) ON DELETE CASCADE; + +ALTER TABLE EXPERIMENT_RELATIONSHIPS_HISTORY ADD CONSTRAINT EXRELH_MAIN_EXPE_FK FOREIGN KEY (MAIN_EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID) ON DELETE CASCADE; +ALTER TABLE EXPERIMENT_RELATIONSHIPS_HISTORY ADD CONSTRAINT EXRELH_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES_ALL(ID) ON DELETE SET NULL; +ALTER TABLE EXPERIMENT_RELATIONSHIPS_HISTORY ADD CONSTRAINT EXRELH_DATA_FK FOREIGN KEY (DATA_ID) REFERENCES DATA_ALL(ID) ON DELETE SET NULL; +ALTER TABLE EXPERIMENT_RELATIONSHIPS_HISTORY ADD CONSTRAINT EXRELH_PROJ_FK FOREIGN KEY (PROJ_ID) REFERENCES PROJECTS(ID) ON DELETE SET NULL; +ALTER TABLE SAMPLE_RELATIONSHIPS_HISTORY ADD CONSTRAINT SAMPRELH_MAIN_SAMP_FK FOREIGN KEY (MAIN_SAMP_ID) REFERENCES SAMPLES_ALL(ID) ON DELETE CASCADE; +ALTER TABLE SAMPLE_RELATIONSHIPS_HISTORY ADD CONSTRAINT SAMPRELH_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID) ON DELETE SET NULL; +ALTER TABLE SAMPLE_RELATIONSHIPS_HISTORY ADD CONSTRAINT SAMPRELH_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES_ALL(ID) ON DELETE SET NULL; +ALTER TABLE SAMPLE_RELATIONSHIPS_HISTORY ADD CONSTRAINT SAMPRELH_DATA_FK FOREIGN KEY (DATA_ID) REFERENCES DATA_ALL(ID) ON DELETE SET NULL; +ALTER TABLE SAMPLE_RELATIONSHIPS_HISTORY ADD CONSTRAINT SAMPRELH_SPACE_FK FOREIGN KEY (SPACE_ID) REFERENCES SPACES(ID) ON DELETE SET NULL; +ALTER TABLE DATA_SET_RELATIONSHIPS_HISTORY ADD CONSTRAINT DATARELH_MAIN_DATA_FK FOREIGN KEY (MAIN_DATA_ID) REFERENCES DATA_ALL(ID) ON DELETE CASCADE; +ALTER TABLE DATA_SET_RELATIONSHIPS_HISTORY ADD CONSTRAINT DATARELH_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID) ON DELETE SET NULL; +ALTER TABLE DATA_SET_RELATIONSHIPS_HISTORY ADD CONSTRAINT DATARELH_SAMP_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES_ALL(ID) ON DELETE SET NULL; +ALTER TABLE DATA_SET_RELATIONSHIPS_HISTORY ADD CONSTRAINT DATARELH_DATA_FK FOREIGN KEY (DATA_ID) REFERENCES DATA_ALL(ID) ON DELETE SET NULL; +ALTER TABLE PROJECT_RELATIONSHIPS_HISTORY ADD CONSTRAINT PRRELH_MAIN_PROJ_FK FOREIGN KEY (MAIN_PROJ_ID) REFERENCES PROJECTS(ID) ON DELETE CASCADE; +ALTER TABLE PROJECT_RELATIONSHIPS_HISTORY ADD CONSTRAINT PRRELH_EXPE_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID) ON DELETE SET NULL; +ALTER TABLE PROJECT_RELATIONSHIPS_HISTORY ADD CONSTRAINT PRRELH_SPACE_FK FOREIGN KEY (SPACE_ID) REFERENCES SPACES(ID) ON DELETE SET NULL; + +ALTER TABLE EXTERNAL_DATA_MANAGEMENT_SYSTEMS ADD CONSTRAINT EDMS_DBIN_FK FOREIGN KEY (DBIN_ID) REFERENCES DATABASE_INSTANCES(ID); +ALTER TABLE LINK_DATA ADD CONSTRAINT LNDA_DATA_FK FOREIGN KEY (DATA_ID) REFERENCES DATA_ALL(ID) ON DELETE CASCADE; +ALTER TABLE LINK_DATA ADD CONSTRAINT LNDA_EDMS_FK FOREIGN KEY (EDMS_ID) REFERENCES EXTERNAL_DATA_MANAGEMENT_SYSTEMS(ID); + +ALTER TABLE METAPROJECTS ADD CONSTRAINT METAPROJECTS_OWNER_FK FOREIGN KEY (OWNER) REFERENCES PERSONS(ID) ON DELETE CASCADE DEFERRABLE INITIALLY DEFERRED; +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_MEPR_ID_FK FOREIGN KEY (MEPR_ID) REFERENCES METAPROJECTS(ID) ON DELETE CASCADE; +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_EXPE_ID_FK FOREIGN KEY (EXPE_ID) REFERENCES EXPERIMENTS_ALL(ID) ON DELETE CASCADE; +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_SAMP_ID_FK FOREIGN KEY (SAMP_ID) REFERENCES SAMPLES_ALL(ID) ON DELETE CASCADE; +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_DATA_ID_FK FOREIGN KEY (DATA_ID) REFERENCES DATA_ALL(ID) ON DELETE CASCADE; +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_MATE_ID_FK FOREIGN KEY (MATE_ID) REFERENCES MATERIALS(ID) ON DELETE CASCADE; +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_DEL_ID_FK FOREIGN KEY (DEL_ID) REFERENCES DELETIONS(ID); + +-- Creating check constraints + +ALTER TABLE EXPERIMENT_PROPERTIES ADD CONSTRAINT EXPR_CK CHECK + ((VALUE IS NOT NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NULL) OR + (VALUE IS NULL AND CVTE_ID IS NOT NULL AND MATE_PROP_ID IS NULL) OR + (VALUE IS NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NOT NULL) + ); +ALTER TABLE EXPERIMENT_PROPERTIES_HISTORY ADD CONSTRAINT EXPRH_CK CHECK + ((VALUE IS NOT NULL AND VOCABULARY_TERM IS NULL AND MATERIAL IS NULL) OR + (VALUE IS NULL AND VOCABULARY_TERM IS NOT NULL AND MATERIAL IS NULL) OR + (VALUE IS NULL AND VOCABULARY_TERM IS NULL AND MATERIAL IS NOT NULL) + ); +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_DBIN_SPACE_ARC_CK CHECK ((DBIN_ID IS NOT NULL AND SPACE_ID IS NULL) OR (DBIN_ID IS NULL AND SPACE_ID IS NOT NULL)); +ALTER TABLE ROLE_ASSIGNMENTS ADD CONSTRAINT ROAS_AG_PERS_ARC_CK CHECK ((AG_ID_GRANTEE IS NOT NULL AND PERS_ID_GRANTEE IS NULL) OR (AG_ID_GRANTEE IS NULL AND PERS_ID_GRANTEE IS NOT NULL)); + +ALTER TABLE SAMPLES_ALL ADD CONSTRAINT SAMP_DBIN_SPACE_ARC_CK CHECK ((DBIN_ID IS NOT NULL AND SPACE_ID IS NULL) OR (DBIN_ID IS NULL AND SPACE_ID IS NOT NULL)); +ALTER TABLE SAMPLE_PROPERTIES ADD CONSTRAINT SAPR_CK CHECK + ((VALUE IS NOT NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NULL) OR + (VALUE IS NULL AND CVTE_ID IS NOT NULL AND MATE_PROP_ID IS NULL) OR + (VALUE IS NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NOT NULL) + ); +ALTER TABLE SAMPLE_PROPERTIES_HISTORY ADD CONSTRAINT SAPRH_CK CHECK + ((VALUE IS NOT NULL AND VOCABULARY_TERM IS NULL AND MATERIAL IS NULL) OR + (VALUE IS NULL AND VOCABULARY_TERM IS NOT NULL AND MATERIAL IS NULL) OR + (VALUE IS NULL AND VOCABULARY_TERM IS NULL AND MATERIAL IS NOT NULL) + ); +ALTER TABLE MATERIAL_PROPERTIES ADD CONSTRAINT MAPR_CK CHECK + ((VALUE IS NOT NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NULL) OR + (VALUE IS NULL AND CVTE_ID IS NOT NULL AND MATE_PROP_ID IS NULL) OR + (VALUE IS NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NOT NULL) + ); +ALTER TABLE MATERIAL_PROPERTIES_HISTORY ADD CONSTRAINT MAPRH_CK CHECK + ((VALUE IS NOT NULL AND VOCABULARY_TERM IS NULL AND MATERIAL IS NULL) OR + (VALUE IS NULL AND VOCABULARY_TERM IS NOT NULL AND MATERIAL IS NULL) OR + (VALUE IS NULL AND VOCABULARY_TERM IS NULL AND MATERIAL IS NOT NULL) + ); +ALTER TABLE DATA_SET_PROPERTIES ADD CONSTRAINT DSPR_CK CHECK + ((VALUE IS NOT NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NULL) OR + (VALUE IS NULL AND CVTE_ID IS NOT NULL AND MATE_PROP_ID IS NULL) OR + (VALUE IS NULL AND CVTE_ID IS NULL AND MATE_PROP_ID IS NOT NULL) + ); +ALTER TABLE DATA_SET_PROPERTIES_HISTORY ADD CONSTRAINT DSPRH_CK CHECK + ((VALUE IS NOT NULL AND VOCABULARY_TERM IS NULL AND MATERIAL IS NULL) OR + (VALUE IS NULL AND VOCABULARY_TERM IS NOT NULL AND MATERIAL IS NULL) OR + (VALUE IS NULL AND VOCABULARY_TERM IS NULL AND MATERIAL IS NOT NULL) + ); +ALTER TABLE ATTACHMENTS ADD CONSTRAINT ATTA_ARC_CK CHECK + ((EXPE_ID IS NOT NULL AND PROJ_ID IS NULL AND SAMP_ID IS NULL) OR + (EXPE_ID IS NULL AND PROJ_ID IS NOT NULL AND SAMP_ID IS NULL) OR + (EXPE_ID IS NULL AND PROJ_ID IS NULL AND SAMP_ID IS NOT NULL) + ); +ALTER TABLE events ADD CONSTRAINT evnt_et_enum_ck CHECK + (entity_type IN ('ATTACHMENT', 'DATASET', 'EXPERIMENT', 'SPACE', 'MATERIAL', 'PROJECT', 'PROPERTY_TYPE', 'SAMPLE', 'VOCABULARY', 'AUTHORIZATION_GROUP', 'METAPROJECT')); +ALTER TABLE controlled_vocabulary_terms ADD CONSTRAINT cvte_ck CHECK (ordinal > 0); + +ALTER TABLE METAPROJECT_ASSIGNMENTS_ALL ADD CONSTRAINT METAPROJECT_ASSIGNMENTS_ALL_CHECK_NN CHECK ( + (EXPE_ID IS NOT NULL AND SAMP_ID IS NULL AND DATA_ID IS NULL AND MATE_ID IS NULL) OR + (EXPE_ID IS NULL AND SAMP_ID IS NOT NULL AND DATA_ID IS NULL AND MATE_ID IS NULL) OR + (EXPE_ID IS NULL AND SAMP_ID IS NULL AND DATA_ID IS NOT NULL AND MATE_ID IS NULL) OR + (EXPE_ID IS NULL AND SAMP_ID IS NULL AND DATA_ID IS NULL AND MATE_ID IS NOT NULL)); + +ALTER TABLE SCRIPTS ADD CONSTRAINT SCRIPT_NN_CK CHECK + (PLUGIN_TYPE = 'PREDEPLOYED' OR SCRIPT IS NOT NULL); + +-- Creating indices + +CREATE INDEX COVO_PERS_FK_I ON CONTROLLED_VOCABULARIES (PERS_ID_REGISTERER); +CREATE INDEX CVTE_COVO_FK_I ON CONTROLLED_VOCABULARY_TERMS (COVO_ID); +CREATE INDEX CVTE_PERS_FK_I ON CONTROLLED_VOCABULARY_TERMS (PERS_ID_REGISTERER); +CREATE INDEX DATA_DSTY_FK_I ON DATA_ALL (DSTY_ID); +CREATE INDEX DATA_SAMP_FK_I ON DATA_ALL (SAMP_ID); +CREATE INDEX DATA_EXPE_FK_I ON DATA_ALL (EXPE_ID); +CREATE INDEX DATA_DEL_FK_I ON DATA_ALL (DEL_ID); +CREATE INDEX DAST_DBIN_FK_I ON DATA_STORES (DBIN_ID); +CREATE INDEX DSRE_DATA_FK_I_CHILD ON DATA_SET_RELATIONSHIPS_ALL (DATA_ID_CHILD); +CREATE INDEX DSRE_DATA_FK_I_PARENT ON DATA_SET_RELATIONSHIPS_ALL (DATA_ID_PARENT); +CREATE INDEX DSRE_DEL_FK_I ON DATA_SET_RELATIONSHIPS_ALL (DEL_ID); +CREATE INDEX sare_data_fk_i_child ON sample_relationships_all (sample_id_child); +CREATE INDEX sare_data_fk_i_parent ON sample_relationships_all (sample_id_parent); +CREATE INDEX sare_data_fk_i_relationship ON sample_relationships_all (relationship_id); +CREATE INDEX sare_del_fk_i ON sample_relationships_all (del_id); +CREATE INDEX DSSE_DS_FK_I ON DATA_STORE_SERVICES (DATA_STORE_ID); +CREATE INDEX DSSDST_DS_FK_I ON DATA_STORE_SERVICE_DATA_SET_TYPES (DATA_STORE_SERVICE_ID); +CREATE INDEX DSSDST_DST_FK_I ON DATA_STORE_SERVICE_DATA_SET_TYPES (DATA_SET_TYPE_ID); +CREATE INDEX ETPT_EXTY_FK_I ON EXPERIMENT_TYPE_PROPERTY_TYPES (EXTY_ID); +CREATE INDEX ETPT_PERS_FK_I ON EXPERIMENT_TYPE_PROPERTY_TYPES (PERS_ID_REGISTERER); +CREATE INDEX ETPT_PRTY_FK_I ON EXPERIMENT_TYPE_PROPERTY_TYPES (PRTY_ID); +CREATE INDEX EVNT_PERS_FK_I ON EVENTS (PERS_ID_REGISTERER); +CREATE INDEX ATTA_EXPE_FK_I ON ATTACHMENTS (EXPE_ID); +CREATE INDEX ATTA_SAMP_FK_I ON ATTACHMENTS (SAMP_ID); +CREATE INDEX ATTA_PROJ_FK_I ON ATTACHMENTS (PROJ_ID); +CREATE INDEX ATTA_PERS_FK_I ON ATTACHMENTS (PERS_ID_REGISTERER); +CREATE INDEX ATTA_EXAC_FK_I ON ATTACHMENTS (EXAC_ID); +CREATE INDEX EXDA_CVTE_FK_I ON EXTERNAL_DATA (CVTE_ID_STOR_FMT); +CREATE INDEX EXDA_CVTE_STORED_ON_FK_I ON EXTERNAL_DATA (CVTE_ID_STORE); +CREATE INDEX EXDA_FFTY_FK_I ON EXTERNAL_DATA (FFTY_ID); +CREATE INDEX EXDA_LOTY_FK_I ON EXTERNAL_DATA (LOTY_ID); +CREATE INDEX EXPE_EXTY_FK_I ON EXPERIMENTS_ALL (EXTY_ID); +CREATE INDEX EXPE_DEL_FK_I ON EXPERIMENTS_ALL (DEL_ID); +CREATE INDEX EXPE_PERS_FK_I ON EXPERIMENTS_ALL (PERS_ID_REGISTERER); +CREATE INDEX EXPE_PROJ_FK_I ON EXPERIMENTS_ALL (PROJ_ID); +CREATE INDEX EXPR_CVTE_FK_I ON EXPERIMENT_PROPERTIES (CVTE_ID); +CREATE INDEX EXPR_ETPT_FK_I ON EXPERIMENT_PROPERTIES (ETPT_ID); +CREATE INDEX EXPR_EXPE_FK_I ON EXPERIMENT_PROPERTIES (EXPE_ID); +CREATE INDEX EXPR_PERS_FK_I ON EXPERIMENT_PROPERTIES (PERS_ID_REGISTERER); +CREATE INDEX EXPR_MAPR_FK_I ON EXPERIMENT_PROPERTIES (MATE_PROP_ID); +CREATE INDEX EXPRH_ETPT_FK_I ON EXPERIMENT_PROPERTIES_HISTORY (ETPT_ID); +CREATE INDEX EXPRH_EXPE_FK_I ON EXPERIMENT_PROPERTIES_HISTORY (EXPE_ID); +CREATE INDEX EXPRH_VUTS_FK_I ON EXPERIMENT_PROPERTIES_HISTORY (VALID_UNTIL_TIMESTAMP); +CREATE INDEX SPACE_DBIN_FK_I ON SPACES (DBIN_ID); +CREATE INDEX SPACE_PERS_REGISTERED_BY_FK_I ON SPACES (PERS_ID_REGISTERER); +CREATE INDEX DEL_PERS_FK_I ON DELETIONS (PERS_ID_REGISTERER); +CREATE INDEX MAPR_CVTE_FK_I ON MATERIAL_PROPERTIES (CVTE_ID); +CREATE INDEX MAPR_MATE_FK_I ON MATERIAL_PROPERTIES (MATE_ID); +CREATE INDEX MAPR_MTPT_FK_I ON MATERIAL_PROPERTIES (MTPT_ID); +CREATE INDEX MAPR_PERS_FK_I ON MATERIAL_PROPERTIES (PERS_ID_REGISTERER); +CREATE INDEX MAPR_MAPR_FK_I ON MATERIAL_PROPERTIES (MATE_PROP_ID); +CREATE INDEX MAPRH_ETPT_FK_I ON MATERIAL_PROPERTIES_HISTORY (MTPT_ID); +CREATE INDEX MAPRH_EXPE_FK_I ON MATERIAL_PROPERTIES_HISTORY (MATE_ID); +CREATE INDEX MAPRH_VUTS_FK_I ON MATERIAL_PROPERTIES_HISTORY (VALID_UNTIL_TIMESTAMP); +CREATE INDEX MATE_MATY_FK_I ON MATERIALS (MATY_ID); +CREATE INDEX MATE_PERS_FK_I ON MATERIALS (PERS_ID_REGISTERER); +CREATE INDEX MTPT_MATY_FK_I ON MATERIAL_TYPE_PROPERTY_TYPES (MATY_ID); +CREATE INDEX MTPT_PERS_FK_I ON MATERIAL_TYPE_PROPERTY_TYPES (PERS_ID_REGISTERER); +CREATE INDEX MTPT_PRTY_FK_I ON MATERIAL_TYPE_PROPERTY_TYPES (PRTY_ID); +CREATE INDEX PERS_SPACE_FK_I ON PERSONS (SPACE_ID); +CREATE INDEX PERS_IS_ACTIVE_I ON PERSONS (IS_ACTIVE); +CREATE INDEX PROJ_SPACE_FK_I ON PROJECTS (SPACE_ID); +CREATE INDEX PROJ_PERS_FK_I_LEADER ON PROJECTS (PERS_ID_LEADER); +CREATE INDEX PROJ_PERS_FK_I_REGISTERER ON PROJECTS (PERS_ID_REGISTERER); +CREATE INDEX PRTY_COVO_FK_I ON PROPERTY_TYPES (COVO_ID); +CREATE INDEX PRTY_DATY_FK_I ON PROPERTY_TYPES (DATY_ID); +CREATE INDEX PRTY_PERS_FK_I ON PROPERTY_TYPES (PERS_ID_REGISTERER); +CREATE INDEX ROAS_DBIN_FK_I ON ROLE_ASSIGNMENTS (DBIN_ID); +CREATE INDEX ROAS_SPACE_FK_I ON ROLE_ASSIGNMENTS (SPACE_ID); +CREATE INDEX ROAS_PERS_FK_I_GRANTEE ON ROLE_ASSIGNMENTS (PERS_ID_GRANTEE); +CREATE INDEX ROAS_AG_FK_I_GRANTEE ON ROLE_ASSIGNMENTS (AG_ID_GRANTEE); +CREATE INDEX ROAS_PERS_FK_I_REGISTERER ON ROLE_ASSIGNMENTS (PERS_ID_REGISTERER); +CREATE INDEX SAMP_DEL_FK_I ON SAMPLES_ALL (DEL_ID); +CREATE INDEX SAMP_PERS_FK_I ON SAMPLES_ALL (PERS_ID_REGISTERER); +CREATE INDEX SAMP_SAMP_FK_I_PART_OF ON SAMPLES_ALL (SAMP_ID_PART_OF); +CREATE INDEX SAMP_EXPE_FK_I ON SAMPLES_ALL (EXPE_ID); +CREATE INDEX SAMP_CODE_I ON SAMPLES_ALL (CODE); +CREATE INDEX SAMP_SATY_FK_I ON SAMPLES_ALL (SATY_ID); +CREATE INDEX SAPR_CVTE_FK_I ON SAMPLE_PROPERTIES (CVTE_ID); +CREATE INDEX SAPR_PERS_FK_I ON SAMPLE_PROPERTIES (PERS_ID_REGISTERER); +CREATE INDEX SAPR_SAMP_FK_I ON SAMPLE_PROPERTIES (SAMP_ID); +CREATE INDEX SAPR_STPT_FK_I ON SAMPLE_PROPERTIES (STPT_ID); +CREATE INDEX SAPR_MAPR_FK_I ON SAMPLE_PROPERTIES (MATE_PROP_ID); +CREATE INDEX SAPRH_ETPT_FK_I ON SAMPLE_PROPERTIES_HISTORY (STPT_ID); +CREATE INDEX SAPRH_EXPE_FK_I ON SAMPLE_PROPERTIES_HISTORY (SAMP_ID); +CREATE INDEX SAPRH_VUTS_FK_I ON SAMPLE_PROPERTIES_HISTORY (VALID_UNTIL_TIMESTAMP); +CREATE INDEX STPT_PERS_FK_I ON SAMPLE_TYPE_PROPERTY_TYPES (PERS_ID_REGISTERER); +CREATE INDEX STPT_PRTY_FK_I ON SAMPLE_TYPE_PROPERTY_TYPES (PRTY_ID); +CREATE INDEX STPT_SATY_FK_I ON SAMPLE_TYPE_PROPERTY_TYPES (SATY_ID); +CREATE INDEX DSPR_CVTE_FK_I ON DATA_SET_PROPERTIES (CVTE_ID); +CREATE INDEX DSPR_DSTPT_FK_I ON DATA_SET_PROPERTIES (DSTPT_ID); +CREATE INDEX DSPR_DS_FK_I ON DATA_SET_PROPERTIES (DS_ID); +CREATE INDEX DSPR_PERS_FK_I ON DATA_SET_PROPERTIES (PERS_ID_REGISTERER); +CREATE INDEX DSPR_MAPR_FK_I ON DATA_SET_PROPERTIES (MATE_PROP_ID); +CREATE INDEX DSPRH_ETPT_FK_I ON DATA_SET_PROPERTIES_HISTORY (DSTPT_ID); +CREATE INDEX DSPRH_EXPE_FK_I ON DATA_SET_PROPERTIES_HISTORY (DS_ID); +CREATE INDEX DSPRH_VUTS_FK_I ON DATA_SET_PROPERTIES_HISTORY (VALID_UNTIL_TIMESTAMP); +CREATE INDEX DSTPT_DSTY_FK_I ON DATA_SET_TYPE_PROPERTY_TYPES (DSTY_ID); +CREATE INDEX DSTPT_PERS_FK_I ON DATA_SET_TYPE_PROPERTY_TYPES (PERS_ID_REGISTERER); +CREATE INDEX DSTPT_PRTY_FK_I ON DATA_SET_TYPE_PROPERTY_TYPES (PRTY_ID); +CREATE INDEX FILT_PERS_FK_I ON FILTERS (PERS_ID_REGISTERER); +CREATE INDEX FILT_DBIN_FK_I ON FILTERS (DBIN_ID); +CREATE INDEX GRID_CUSTOM_COLUMNS_PERS_FK_I ON GRID_CUSTOM_COLUMNS (PERS_ID_REGISTERER); +CREATE INDEX GRID_CUSTOM_COLUMNS_DBIN_FK_I ON GRID_CUSTOM_COLUMNS (DBIN_ID); +CREATE INDEX SCRIPT_PERS_FK_I ON SCRIPTS (PERS_ID_REGISTERER); +CREATE INDEX SCRIPT_DBIN_FK_I ON SCRIPTS (DBIN_ID); +CREATE INDEX ENTITY_OPERATIONS_LOG_RID_I ON ENTITY_OPERATIONS_LOG(REGISTRATION_ID); +CREATE INDEX EXRELH_MAIN_EXPE_FK_I ON EXPERIMENT_RELATIONSHIPS_HISTORY (MAIN_EXPE_ID); +CREATE INDEX EXRELH_MAIN_EXPE_FK_SAMP_FK_I ON EXPERIMENT_RELATIONSHIPS_HISTORY (MAIN_EXPE_ID, SAMP_ID); +CREATE INDEX EXRELH_MAIN_EXPE_FK_DATA_FK_I ON EXPERIMENT_RELATIONSHIPS_HISTORY (MAIN_EXPE_ID, DATA_ID); +CREATE INDEX EXRELH_MAIN_EXPE_FK_PROJ_FK_I ON EXPERIMENT_RELATIONSHIPS_HISTORY (MAIN_EXPE_ID, PROJ_ID); +CREATE INDEX EXRELH_SAMP_ID_FK_I ON EXPERIMENT_RELATIONSHIPS_HISTORY (SAMP_ID); +CREATE INDEX EXRELH_DATA_ID_FK_I ON EXPERIMENT_RELATIONSHIPS_HISTORY (DATA_ID); +CREATE INDEX SAMPRELH_MAIN_SAMP_FK_I ON SAMPLE_RELATIONSHIPS_HISTORY (MAIN_SAMP_ID); +CREATE INDEX SAMPRELH_MAIN_SAMP_FK_EXPE_FK_I ON SAMPLE_RELATIONSHIPS_HISTORY (MAIN_SAMP_ID, EXPE_ID); +CREATE INDEX SAMPRELH_MAIN_SAMP_FK_SAMP_FK_I ON SAMPLE_RELATIONSHIPS_HISTORY (MAIN_SAMP_ID, SAMP_ID); +CREATE INDEX SAMPRELH_MAIN_SAMP_FK_DATA_FK_I ON SAMPLE_RELATIONSHIPS_HISTORY (MAIN_SAMP_ID, DATA_ID); +CREATE INDEX SAMPRELH_MAIN_SAMP_FK_SPACE_FK_I ON SAMPLE_RELATIONSHIPS_HISTORY (MAIN_SAMP_ID, SPACE_ID); +CREATE INDEX SAMPRELH_SAMP_ID_FK_I ON SAMPLE_RELATIONSHIPS_HISTORY (SAMP_ID); +CREATE INDEX SAMPRELH_DATA_ID_FK_I ON SAMPLE_RELATIONSHIPS_HISTORY (DATA_ID); +CREATE INDEX DATARELH_MAIN_DATA_FK_I ON DATA_SET_RELATIONSHIPS_HISTORY (MAIN_DATA_ID); +CREATE INDEX DATARELH_MAIN_DATA_FK_EXPE_FK_I ON DATA_SET_RELATIONSHIPS_HISTORY (MAIN_DATA_ID, EXPE_ID); +CREATE INDEX DATARELH_MAIN_DATA_FK_SAMP_FK_I ON DATA_SET_RELATIONSHIPS_HISTORY (MAIN_DATA_ID, SAMP_ID); +CREATE INDEX DATARELH_MAIN_DATA_FK_DATA_FK_I ON DATA_SET_RELATIONSHIPS_HISTORY (MAIN_DATA_ID, DATA_ID); +CREATE INDEX DATARELH_DATA_FK_I ON DATA_SET_RELATIONSHIPS_HISTORY (DATA_ID); +CREATE INDEX PRRELH_MAIN_PROJ_FK_I ON PROJECT_RELATIONSHIPS_HISTORY (MAIN_PROJ_ID); +CREATE INDEX PRRELH_MAIN_PROJ_FK_EXPE_FK_I ON PROJECT_RELATIONSHIPS_HISTORY (MAIN_PROJ_ID, EXPE_ID); +CREATE INDEX PRRELH_MAIN_PROJ_FK_SPACE_FK_I ON PROJECT_RELATIONSHIPS_HISTORY (MAIN_PROJ_ID, SPACE_ID); +CREATE INDEX METAPROJECTS_OWNER_FK_I ON METAPROJECTS (OWNER); +CREATE INDEX METAPROJECTS_NAME_I ON METAPROJECTS (NAME); +CREATE UNIQUE INDEX METAPROJECTS_NAME_OWNER_UK ON METAPROJECTS (lower(NAME), OWNER); +CREATE INDEX METAPROJECT_ASSIGNMENTS_ALL_MEPR_FK_I ON METAPROJECT_ASSIGNMENTS_ALL (MEPR_ID); +CREATE INDEX METAPROJECT_ASSIGNMENTS_ALL_EXPE_FK_I ON METAPROJECT_ASSIGNMENTS_ALL (EXPE_ID); +CREATE INDEX METAPROJECT_ASSIGNMENTS_ALL_SAMP_FK_I ON METAPROJECT_ASSIGNMENTS_ALL (SAMP_ID); +CREATE INDEX METAPROJECT_ASSIGNMENTS_ALL_DATA_FK_I ON METAPROJECT_ASSIGNMENTS_ALL (DATA_ID); +CREATE INDEX METAPROJECT_ASSIGNMENTS_ALL_MATE_FK_I ON METAPROJECT_ASSIGNMENTS_ALL (MATE_ID); +CREATE INDEX METAPROJECT_ASSIGNMENTS_ALL_DEL_FK_I ON METAPROJECT_ASSIGNMENTS_ALL (DEL_ID); diff --git a/openbis/source/sql/postgresql/138/domains-138.sql b/openbis/source/sql/postgresql/138/domains-138.sql new file mode 100644 index 0000000000000000000000000000000000000000..e7d7db03b4b7eec911945ea801fe6d130472c8d6 --- /dev/null +++ b/openbis/source/sql/postgresql/138/domains-138.sql @@ -0,0 +1,31 @@ +-- Creating domains + +CREATE DOMAIN AUTHORIZATION_ROLE AS VARCHAR(40) CHECK (VALUE IN ('ADMIN', 'POWER_USER', 'USER', 'OBSERVER', 'ETL_SERVER')); +CREATE DOMAIN BOOLEAN_CHAR AS BOOLEAN DEFAULT FALSE; +CREATE DOMAIN BOOLEAN_CHAR_OR_UNKNOWN AS CHAR(1) DEFAULT 'U' CHECK (VALUE IN ('F', 'T', 'U')); +CREATE DOMAIN CODE AS VARCHAR(60); +CREATE DOMAIN COLUMN_LABEL AS VARCHAR(128); +CREATE DOMAIN DATA_STORE_SERVICE_KIND AS VARCHAR(40) CHECK (VALUE IN ('PROCESSING', 'QUERIES')); +CREATE DOMAIN DATA_STORE_SERVICE_REPORTING_PLUGIN_TYPE AS VARCHAR(40) CHECK (VALUE IN ('TABLE_MODEL', 'DSS_LINK', 'AGGREGATION_TABLE_MODEL')); +CREATE DOMAIN EVENT_TYPE AS VARCHAR(40) CHECK (VALUE IN ('DELETION', 'MOVEMENT')); +CREATE DOMAIN FILE AS BYTEA; +CREATE DOMAIN FILE_NAME AS VARCHAR(255); +CREATE DOMAIN TEXT_VALUE AS TEXT; +CREATE DOMAIN OBJECT_NAME AS VARCHAR(50); +CREATE DOMAIN REAL_VALUE AS REAL; +CREATE DOMAIN TECH_ID AS BIGINT; +CREATE DOMAIN TIME_STAMP AS TIMESTAMP WITH TIME ZONE; +CREATE DOMAIN TIME_STAMP_DFL AS TIMESTAMP WITH TIME ZONE NOT NULL DEFAULT CURRENT_TIMESTAMP; +CREATE DOMAIN USER_ID AS VARCHAR(50); +CREATE DOMAIN TITLE_100 AS VARCHAR(100); +CREATE DOMAIN GRID_EXPRESSION AS VARCHAR(2000); +CREATE DOMAIN GRID_ID AS VARCHAR(200); +CREATE DOMAIN ORDINAL_INT AS BIGINT CHECK (VALUE > 0); +CREATE DOMAIN DESCRIPTION_2000 AS VARCHAR(2000); +CREATE DOMAIN ARCHIVING_STATUS AS VARCHAR(100) CHECK (VALUE IN ('LOCKED', 'AVAILABLE', 'ARCHIVED', 'ARCHIVE_PENDING', 'UNARCHIVE_PENDING', 'BACKUP_PENDING')); +CREATE DOMAIN QUERY_TYPE AS VARCHAR(40) CHECK (VALUE IN ('GENERIC', 'EXPERIMENT', 'SAMPLE', 'DATA_SET', 'MATERIAL')); +CREATE DOMAIN ENTITY_KIND AS VARCHAR(40) CHECK (VALUE IN ('SAMPLE', 'EXPERIMENT', 'DATA_SET', 'MATERIAL')); +CREATE DOMAIN SCRIPT_TYPE AS VARCHAR(40) CHECK (VALUE IN ('DYNAMIC_PROPERTY', 'MANAGED_PROPERTY', 'ENTITY_VALIDATION')); +CREATE DOMAIN IDENTIFIER AS VARCHAR(200); +CREATE DOMAIN DATA_SET_KIND AS VARCHAR(40) CHECK (VALUE IN ('PHYSICAL', 'LINK', 'CONTAINER')); +CREATE DOMAIN PLUGIN_TYPE AS VARCHAR(40) CHECK (VALUE IN ('JYTHON', 'PREDEPLOYED')); \ No newline at end of file diff --git a/openbis/source/sql/postgresql/138/function-138.sql b/openbis/source/sql/postgresql/138/function-138.sql new file mode 100644 index 0000000000000000000000000000000000000000..6a73f452916735298e649beb5e5dd3c85a20ec59 --- /dev/null +++ b/openbis/source/sql/postgresql/138/function-138.sql @@ -0,0 +1,1986 @@ +-- Creating Functions + +------------------------------------------------------------------------------------ +-- Purpose: Create function RENAME_SEQUENCE() that is required for renaming the sequences belonging to tables +------------------------------------------------------------------------------------ +CREATE FUNCTION RENAME_SEQUENCE(OLD_NAME VARCHAR, NEW_NAME VARCHAR) RETURNS INTEGER AS $$ +DECLARE + CURR_SEQ_VAL INTEGER; +BEGIN + SELECT INTO CURR_SEQ_VAL NEXTVAL(OLD_NAME); + EXECUTE 'CREATE SEQUENCE ' || NEW_NAME || ' START WITH ' || CURR_SEQ_VAL; + EXECUTE 'DROP SEQUENCE ' || OLD_NAME; + RETURN CURR_SEQ_VAL; +END; +$$ LANGUAGE 'plpgsql'; + + +------------------------------------------------------------------------------------ +-- Purpose: Create trigger CONTROLLED_VOCABULARY_CHECK +------------------------------------------------------------------------------------ + +CREATE OR REPLACE FUNCTION CONTROLLED_VOCABULARY_CHECK() RETURNS trigger AS $$ +DECLARE + v_code CODE; +BEGIN + + select code into v_code from data_types where id = NEW.daty_id; + + -- Check if the data is of type "CONTROLLEDVOCABULARY" + if v_code = 'CONTROLLEDVOCABULARY' then + if NEW.covo_id IS NULL then + RAISE EXCEPTION 'Insert/Update of Property Type (Code: %) failed, as its Data Type is CONTROLLEDVOCABULARY, but it is not linked to a Controlled Vocabulary.', NEW.code; + end if; + end if; + + RETURN NEW; + +END; +$$ LANGUAGE 'plpgsql'; + +CREATE TRIGGER CONTROLLED_VOCABULARY_CHECK BEFORE INSERT OR UPDATE ON PROPERTY_TYPES + FOR EACH ROW EXECUTE PROCEDURE CONTROLLED_VOCABULARY_CHECK(); + + +------------------------------------------------------------------------------------ +-- Purpose: Create trigger EXTERNAL_DATA_STORAGE_FORMAT_CHECK +------------------------------------------------------------------------------------ + +CREATE OR REPLACE FUNCTION EXTERNAL_DATA_STORAGE_FORMAT_CHECK() RETURNS trigger AS $$ +DECLARE + v_covo_code CODE; + data_code CODE; +BEGIN + + select code into v_covo_code from controlled_vocabularies + where is_internal_namespace = true and + id = (select covo_id from controlled_vocabulary_terms where id = NEW.cvte_id_stor_fmt); + -- Check if the data storage format is a term of the controlled vocabulary "STORAGE_FORMAT" + if v_covo_code != 'STORAGE_FORMAT' then + select code into data_code from data_all where id = NEW.data_id; + RAISE EXCEPTION 'Insert/Update of Data (Code: %) failed, as its Storage Format is %, but is required to be STORAGE_FORMAT.', data_code, v_covo_code; + end if; + + RETURN NEW; + +END; +$$ LANGUAGE 'plpgsql'; + +CREATE TRIGGER EXTERNAL_DATA_STORAGE_FORMAT_CHECK BEFORE INSERT OR UPDATE ON EXTERNAL_DATA + FOR EACH ROW EXECUTE PROCEDURE EXTERNAL_DATA_STORAGE_FORMAT_CHECK(); + + +------------------------------------------------------------------------------------ +-- Purpose: Create triggers for checking sample code uniqueness +------------------------------------------------------------------------------------ + + +CREATE OR REPLACE FUNCTION sample_fill_code_unique_check() + RETURNS trigger AS +$BODY$ +BEGIN + NEW.code_unique_check = NEW.code || ',' || coalesce(NEW.samp_id_part_of, -1) || ',' || coalesce(NEW.space_id, -1) || ',' || coalesce(NEW.dbin_id, -1); + RETURN NEW; +END; +$BODY$ + LANGUAGE 'plpgsql'; + + + +CREATE OR REPLACE FUNCTION sample_fill_subcode_unique_check() + RETURNS trigger AS +$BODY$ +DECLARE + unique_subcode BOOLEAN_CHAR; +BEGIN + SELECT is_subcode_unique into unique_subcode FROM sample_types WHERE id = NEW.saty_id; + + IF (unique_subcode) THEN + NEW.subcode_unique_check = NEW.code || ',' || coalesce(NEW.saty_id, -1) || ',' || coalesce(NEW.space_id, -1) || ',' || coalesce(NEW.dbin_id, -1); + ELSE + NEW.subcode_unique_check = NULL; + END IF; + + RETURN NEW; +END; +$BODY$ + LANGUAGE 'plpgsql'; + + + +CREATE OR REPLACE FUNCTION sample_type_fill_subcode_unique_check() + RETURNS trigger AS +$BODY$ +BEGIN + IF (NEW.is_subcode_unique::boolean <> OLD.is_subcode_unique::boolean) THEN + UPDATE samples_all SET subcode_unique_check = subcode_unique_check WHERE saty_id = NEW.id; + END IF; + RETURN NEW; +END; +$BODY$ + LANGUAGE 'plpgsql'; + + +CREATE TRIGGER sample_fill_code_unique_check + BEFORE INSERT OR UPDATE + ON samples_all + FOR EACH ROW + EXECUTE PROCEDURE sample_fill_code_unique_check(); + +CREATE TRIGGER sample_fill_subcode_unique_check + BEFORE INSERT OR UPDATE + ON samples_all + FOR EACH ROW + EXECUTE PROCEDURE sample_fill_subcode_unique_check(); + +CREATE TRIGGER sample_type_fill_subcode_unique_check + AFTER UPDATE + ON sample_types + FOR EACH ROW + EXECUTE PROCEDURE sample_type_fill_subcode_unique_check(); + + +------------------------------------------------------------------------------------ +-- Purpose: Create trigger MATERIAL/SAMPLE/EXPERIMENT/DATA_SET _PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK +-- It checks that if material property value is assigned to the entity, +-- then the material type is equal to the one described by property type. +------------------------------------------------------------------------------------ + +CREATE OR REPLACE FUNCTION MATERIAL_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK() RETURNS trigger AS $$ +DECLARE + v_type_id CODE; + v_type_id_prop CODE; +BEGIN + if NEW.mate_prop_id IS NOT NULL then + -- find material type id of the property type + select pt.maty_prop_id into v_type_id_prop + from material_type_property_types etpt, property_types pt + where NEW.mtpt_id = etpt.id AND etpt.prty_id = pt.id; + + if v_type_id_prop IS NOT NULL then + -- find material type id of the material which consists the entity's property value + select entity.maty_id into v_type_id + from materials entity + where NEW.mate_prop_id = entity.id; + if v_type_id != v_type_id_prop then + RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).', + NEW.mate_prop_id, v_type_id, v_type_id_prop; + end if; + end if; + end if; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE TRIGGER MATERIAL_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK BEFORE INSERT OR UPDATE ON material_properties + FOR EACH ROW EXECUTE PROCEDURE MATERIAL_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK(); + +CREATE OR REPLACE FUNCTION SAMPLE_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK() RETURNS trigger AS $$ +DECLARE + v_type_id CODE; + v_type_id_prop CODE; +BEGIN + if NEW.mate_prop_id IS NOT NULL then + -- find material type id of the property type + select pt.maty_prop_id into v_type_id_prop + from sample_type_property_types etpt, property_types pt + where NEW.stpt_id = etpt.id AND etpt.prty_id = pt.id; + + if v_type_id_prop IS NOT NULL then + -- find material type id of the material which consists the entity's property value + select entity.maty_id into v_type_id + from materials entity + where NEW.mate_prop_id = entity.id; + if v_type_id != v_type_id_prop then + RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).', + NEW.mate_prop_id, v_type_id, v_type_id_prop; + end if; + end if; + end if; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE TRIGGER SAMPLE_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK BEFORE INSERT OR UPDATE ON sample_properties + FOR EACH ROW EXECUTE PROCEDURE SAMPLE_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK(); + +CREATE OR REPLACE FUNCTION EXPERIMENT_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK() RETURNS trigger AS $$ +DECLARE + v_type_id CODE; + v_type_id_prop CODE; +BEGIN + if NEW.mate_prop_id IS NOT NULL then + -- find material type id of the property type + select pt.maty_prop_id into v_type_id_prop + from experiment_type_property_types etpt, property_types pt + where NEW.etpt_id = etpt.id AND etpt.prty_id = pt.id; + + if v_type_id_prop IS NOT NULL then + -- find material type id of the material which consists the entity's property value + select entity.maty_id into v_type_id + from materials entity + where NEW.mate_prop_id = entity.id; + if v_type_id != v_type_id_prop then + RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).', + NEW.mate_prop_id, v_type_id, v_type_id_prop; + end if; + end if; + end if; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE TRIGGER EXPERIMENT_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK BEFORE INSERT OR UPDATE ON experiment_properties + FOR EACH ROW EXECUTE PROCEDURE EXPERIMENT_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK(); + + -- data set +CREATE OR REPLACE FUNCTION DATA_SET_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK() RETURNS trigger AS $$ +DECLARE + v_type_id CODE; + v_type_id_prop CODE; +BEGIN + if NEW.mate_prop_id IS NOT NULL then + -- find material type id of the property type + select pt.maty_prop_id into v_type_id_prop + from data_set_type_property_types dstpt, property_types pt + where NEW.dstpt_id = dstpt.id AND dstpt.prty_id = pt.id; + + if v_type_id_prop IS NOT NULL then + -- find material type id of the material which consists the entity's property value + select entity.maty_id into v_type_id + from materials entity + where NEW.mate_prop_id = entity.id; + if v_type_id != v_type_id_prop then + RAISE EXCEPTION 'Insert/Update of property value referencing material (id: %) failed, as referenced material type is different than expected (id %, expected id: %).', + NEW.mate_prop_id, v_type_id, v_type_id_prop; + end if; + end if; + end if; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE TRIGGER DATA_SET_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK BEFORE INSERT OR UPDATE ON data_set_properties + FOR EACH ROW EXECUTE PROCEDURE DATA_SET_PROPERTY_WITH_MATERIAL_DATA_TYPE_CHECK(); + +---------------------------------------------------------------------------------------------------- +-- Purpose: Create DEFERRED triggers for checking consistency of deletion state. +---------------------------------------------------------------------------------------------------- +-- utility function describing a deletion + +CREATE OR REPLACE FUNCTION deletion_description(del_id TECH_ID) RETURNS VARCHAR AS $$ +DECLARE + del_person VARCHAR; + del_date VARCHAR; + del_reason VARCHAR; +BEGIN + SELECT p.last_name || ' ' || p.first_name || ' (' || p.email || ')', + to_char(d.registration_timestamp, 'YYYY-MM-DD HH:MM:SS'), d.reason + INTO del_person, del_date, del_reason FROM deletions d, persons p + WHERE d.pers_id_registerer = p.id AND d.id = del_id; + RETURN 'deleted by ' || del_person || ' on ' || del_date || ' with reason: "' || del_reason || '"'; +END; +$$ LANGUAGE 'plpgsql'; + +---------------------------------------------------------------------------------------------------- +-- 1. data set +--- on insert/update - experiment, sample can't be deleted unless the data set is delete +--- - parents/children relationship stays unchanged + +CREATE OR REPLACE FUNCTION check_created_or_modified_data_set_owner_is_alive() RETURNS trigger AS $$ +DECLARE + owner_code CODE; + owner_del_id TECH_ID; +BEGIN + IF (NEW.del_id IS NOT NULL) THEN + RETURN NEW; + END IF; + + -- check sample + IF (NEW.samp_id IS NOT NULL) THEN + SELECT del_id, code INTO owner_del_id, owner_code + FROM samples + WHERE id = NEW.samp_id; + IF (owner_del_id IS NOT NULL) THEN + RAISE EXCEPTION 'Data Set (Code: %) cannot be connected to a Sample (Code: %) %.', + NEW.code, owner_code, deletion_description(owner_del_id); + END IF; + END IF; + -- check experiment + SELECT del_id, code INTO owner_del_id, owner_code + FROM experiments + WHERE id = NEW.expe_id; + IF (owner_del_id IS NOT NULL) THEN + RAISE EXCEPTION 'Data Set (Code: %) cannot be connected to an Experiment (Code: %) %.', + NEW.code, owner_code, deletion_description(owner_del_id); + END IF; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE CONSTRAINT TRIGGER check_created_or_modified_data_set_owner_is_alive + AFTER INSERT OR UPDATE ON data_all + DEFERRABLE INITIALLY DEFERRED + FOR EACH ROW + EXECUTE PROCEDURE check_created_or_modified_data_set_owner_is_alive(); + +---------------------------------------------------------------------------------------------------- +-- 2. sample +--- on insert/update -> experiment can't be deleted unless the sample is deleted +--- deletion +----> all directly connected data sets need to be deleted +----> all components and children need to be deleted + +CREATE OR REPLACE FUNCTION check_created_or_modified_sample_owner_is_alive() RETURNS trigger AS $$ +DECLARE + owner_code CODE; + owner_del_id TECH_ID; +BEGIN + IF (NEW.del_id IS NOT NULL) THEN + RETURN NEW; + END IF; + + -- check experiment (can't be deleted) + IF (NEW.expe_id IS NOT NULL) THEN + SELECT del_id, code INTO owner_del_id, owner_code + FROM experiments + WHERE id = NEW.expe_id; + IF (owner_del_id IS NOT NULL) THEN + RAISE EXCEPTION 'Sample (Code: %) cannot be connected to an Experiment (Code: %) %.', + NEW.code, owner_code, deletion_description(owner_del_id); + END IF; + END IF; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE CONSTRAINT TRIGGER check_created_or_modified_sample_owner_is_alive + AFTER INSERT OR UPDATE ON samples_all + DEFERRABLE INITIALLY DEFERRED + FOR EACH ROW + EXECUTE PROCEDURE check_created_or_modified_sample_owner_is_alive(); + +CREATE OR REPLACE FUNCTION check_deletion_consistency_on_sample_deletion() RETURNS trigger AS $$ +DECLARE + counter INTEGER; +BEGIN + IF (OLD.del_id IS NOT NULL OR NEW.del_id IS NULL) THEN + RETURN NEW; + END IF; + + -- all directly connected data sets need to be deleted + -- check datasets + SELECT count(*) INTO counter + FROM data + WHERE data.samp_id = NEW.id AND data.del_id IS NULL; + IF (counter > 0) THEN + RAISE EXCEPTION 'Sample (Code: %) deletion failed because at least one of its data sets was not deleted.', NEW.code; + END IF; + -- all components need to be deleted + SELECT count(*) INTO counter + FROM samples + WHERE samples.samp_id_part_of = NEW.id AND samples.del_id IS NULL; + IF (counter > 0) THEN + RAISE EXCEPTION 'Sample (Code: %) deletion failed because at least one of its component samples was not deleted.', NEW.code; + END IF; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE CONSTRAINT TRIGGER check_deletion_consistency_on_sample_deletion + AFTER UPDATE ON samples_all + DEFERRABLE INITIALLY DEFERRED + FOR EACH ROW + EXECUTE PROCEDURE check_deletion_consistency_on_sample_deletion(); + +----------------------------------------- +-- update sample relationships on revert +----------------------------------------- + +CREATE OR REPLACE FUNCTION preserve_deletion_consistency_on_sample_relationships() RETURNS trigger AS $$ +DECLARE + delid TECH_ID; +BEGIN + IF (NEW.del_id IS NOT NULL OR OLD.del_id IS NULL) THEN + RETURN NEW; + END IF; + SELECT del_id INTO delid + FROM SAMPLES_ALL where id = NEW.sample_id_parent; + IF (delid IS NOT NULL) THEN + NEW.del_id = delid; + END IF; + SELECT del_id INTO delid + FROM SAMPLES_ALL where id = NEW.sample_id_child; + IF (delid IS NOT NULL) THEN + NEW.del_id = delid; + END IF; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE TRIGGER preserve_deletion_consistency_on_sample_relationships + BEFORE UPDATE ON sample_relationships_all + FOR EACH ROW + EXECUTE PROCEDURE preserve_deletion_consistency_on_sample_relationships(); + +----------------------------------------- +-- update dataset relationships on revert +----------------------------------------- +CREATE OR REPLACE FUNCTION preserve_deletion_consistency_on_data_set_relationships() RETURNS trigger AS $$ +DECLARE + delid TECH_ID; +BEGIN + IF (NEW.del_id IS NOT NULL OR OLD.del_id IS NULL) THEN + RETURN NEW; + END IF; + SELECT del_id INTO delid + FROM DATA_ALL where id = NEW.data_id_parent; + IF (delid IS NOT NULL) THEN + NEW.del_id = delid; + END IF; + SELECT del_id INTO delid + FROM DATA_ALL where id = NEW.data_id_child; + IF (delid IS NOT NULL) THEN + NEW.del_id = delid; + END IF; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE TRIGGER preserve_deletion_consistency_on_data_set_relationships + BEFORE UPDATE ON data_set_relationships_all + FOR EACH ROW + EXECUTE PROCEDURE preserve_deletion_consistency_on_data_set_relationships(); + +---------------------------------------------------------------------------------------------------- +-- 3. experiment +--- deletion -> all directly connected samples and data sets need to be deleted + +CREATE OR REPLACE FUNCTION check_deletion_consistency_on_experiment_deletion() RETURNS trigger AS $$ +DECLARE + counter INTEGER; +BEGIN + IF (OLD.del_id IS NOT NULL OR NEW.del_id IS NULL) THEN + RETURN NEW; + END IF; + + -- check datasets + SELECT count(*) INTO counter + FROM data + WHERE data.expe_id = NEW.id AND data.del_id IS NULL; + IF (counter > 0) THEN + RAISE EXCEPTION 'Experiment (Code: %) deletion failed because at least one of its data sets was not deleted.', NEW.code; + END IF; + -- check samples + SELECT count(*) INTO counter + FROM samples + WHERE samples.expe_id = NEW.id AND samples.del_id IS NULL; + IF (counter > 0) THEN + RAISE EXCEPTION 'Experiment (Code: %) deletion failed because at least one of its samples was not deleted.', NEW.code; + END IF; + RETURN NEW; +END; +$$ LANGUAGE 'plpgsql'; + +CREATE CONSTRAINT TRIGGER check_deletion_consistency_on_experiment_deletion + AFTER UPDATE ON experiments_all + DEFERRABLE INITIALLY DEFERRED + FOR EACH ROW + EXECUTE PROCEDURE check_deletion_consistency_on_experiment_deletion(); + +---------------------------------------------------------------------------------------------------- +-- Rules for views +---------------------------------------------------------------------------------------------------- +CREATE OR REPLACE RULE sample_insert AS + ON INSERT TO samples DO INSTEAD + INSERT INTO samples_all ( + id, + code, + dbin_id, + del_id, + orig_del, + expe_id, + modification_timestamp, + perm_id, + pers_id_registerer, + pers_id_modifier, + registration_timestamp, + samp_id_part_of, + saty_id, + space_id, + version + ) VALUES ( + NEW.id, + NEW.code, + NEW.dbin_id, + NEW.del_id, + NEW.orig_del, + NEW.expe_id, + NEW.modification_timestamp, + NEW.perm_id, + NEW.pers_id_registerer, + NEW.pers_id_modifier, + NEW.registration_timestamp, + NEW.samp_id_part_of, + NEW.saty_id, + NEW.space_id, + NEW.version + ); + +CREATE OR REPLACE RULE sample_update AS + ON UPDATE TO samples DO INSTEAD + UPDATE samples_all + SET code = NEW.code, + dbin_id = NEW.dbin_id, + del_id = NEW.del_id, + orig_del = NEW.orig_del, + expe_id = NEW.expe_id, + modification_timestamp = NEW.modification_timestamp, + perm_id = NEW.perm_id, + pers_id_registerer = NEW.pers_id_registerer, + pers_id_modifier = NEW.pers_id_modifier, + registration_timestamp = NEW.registration_timestamp, + samp_id_part_of = NEW.samp_id_part_of, + saty_id = NEW.saty_id, + space_id = NEW.space_id, + version = NEW.version + WHERE id = NEW.id; + +CREATE OR REPLACE RULE sample_delete AS + ON DELETE TO samples DO INSTEAD + DELETE FROM samples_all + WHERE id = OLD.id; + +CREATE OR REPLACE RULE sample_deleted_update AS + ON UPDATE TO samples_deleted DO INSTEAD + UPDATE samples_all + SET del_id = NEW.del_id, + orig_del = NEW.orig_del, + modification_timestamp = NEW.modification_timestamp, + version = NEW.version + WHERE id = NEW.id; + +CREATE OR REPLACE RULE sample_deleted_delete AS + ON DELETE TO samples_deleted DO INSTEAD + DELETE FROM samples_all + WHERE id = OLD.id; + +---------------- +-- experiment -- +---------------- + +CREATE OR REPLACE RULE experiment_insert AS + ON INSERT TO experiments DO INSTEAD + INSERT INTO experiments_all ( + id, + code, + del_id, + orig_del, + exty_id, + is_public, + modification_timestamp, + perm_id, + pers_id_registerer, + pers_id_modifier, + proj_id, + registration_timestamp, + version + ) VALUES ( + NEW.id, + NEW.code, + NEW.del_id, + NEW.orig_del, + NEW.exty_id, + NEW.is_public, + NEW.modification_timestamp, + NEW.perm_id, + NEW.pers_id_registerer, + NEW.pers_id_modifier, + NEW.proj_id, + NEW.registration_timestamp, + NEW.version + ); + +CREATE OR REPLACE RULE experiment_update AS + ON UPDATE TO experiments DO INSTEAD + UPDATE experiments_all + SET code = NEW.code, + del_id = NEW.del_id, + orig_del = NEW.orig_del, + exty_id = NEW.exty_id, + is_public = NEW.is_public, + modification_timestamp = NEW.modification_timestamp, + perm_id = NEW.perm_id, + pers_id_registerer = NEW.pers_id_registerer, + pers_id_modifier = NEW.pers_id_modifier, + proj_id = NEW.proj_id, + registration_timestamp = NEW.registration_timestamp, + version = NEW.version + WHERE id = NEW.id; + +CREATE OR REPLACE RULE experiment_delete AS + ON DELETE TO experiments DO INSTEAD + DELETE FROM experiments_all + WHERE id = OLD.id; + +CREATE OR REPLACE RULE experiments_deleted_update AS + ON UPDATE TO experiments_deleted DO INSTEAD + UPDATE experiments_all + SET del_id = NEW.del_id, + orig_del = NEW.orig_del, + modification_timestamp = NEW.modification_timestamp, + version = NEW.version + WHERE id = NEW.id; + +CREATE OR REPLACE RULE experiments_deleted_delete AS + ON DELETE TO experiments_deleted DO INSTEAD + DELETE FROM experiments_all + WHERE id = OLD.id; + + +---------- +-- data -- +---------- + +CREATE OR REPLACE RULE data_insert AS + ON INSERT TO data DO INSTEAD + INSERT INTO data_all ( + id, + code, + del_id, + orig_del, + expe_id, + dast_id, + data_producer_code, + dsty_id, + is_derived, + is_placeholder, + is_valid, + modification_timestamp, + pers_id_registerer, + pers_id_modifier, + production_timestamp, + registration_timestamp, + samp_id, + version + ) VALUES ( + NEW.id, + NEW.code, + NEW.del_id, + NEW.orig_del, + NEW.expe_id, + NEW.dast_id, + NEW.data_producer_code, + NEW.dsty_id, + NEW.is_derived, + NEW.is_placeholder, + NEW.is_valid, + NEW.modification_timestamp, + NEW.pers_id_registerer, + NEW.pers_id_modifier, + NEW.production_timestamp, + NEW.registration_timestamp, + NEW.samp_id, + NEW.version + ); + +CREATE OR REPLACE RULE data_update AS + ON UPDATE TO data DO INSTEAD + UPDATE data_all + SET code = NEW.code, + del_id = NEW.del_id, + orig_del = NEW.orig_del, + expe_id = NEW.expe_id, + dast_id = NEW.dast_id, + data_producer_code = NEW.data_producer_code, + dsty_id = NEW.dsty_id, + is_derived = NEW.is_derived, + is_placeholder = NEW.is_placeholder, + is_valid = NEW.is_valid, + modification_timestamp = NEW.modification_timestamp, + pers_id_registerer = NEW.pers_id_registerer, + pers_id_modifier = NEW.pers_id_modifier, + production_timestamp = NEW.production_timestamp, + registration_timestamp = NEW.registration_timestamp, + samp_id = NEW.samp_id, + version = NEW.version + WHERE id = NEW.id; + +CREATE OR REPLACE RULE data_all AS + ON DELETE TO data DO INSTEAD + DELETE FROM data_all + WHERE id = OLD.id; + +CREATE OR REPLACE RULE data_deleted_update AS + ON UPDATE TO data_deleted DO INSTEAD + UPDATE data_all + SET del_id = NEW.del_id, + orig_del = NEW.orig_del, + modification_timestamp = NEW.modification_timestamp, + version = NEW.version + WHERE id = NEW.id; + +CREATE OR REPLACE RULE data_deleted_delete AS + ON DELETE TO data_deleted DO INSTEAD + DELETE FROM data_all + WHERE id = OLD.id; + + +---------------------------------------------------------------------------------------------------- +-- Rules for properties history +---------------------------------------------------------------------------------------------------- + +-- Material Properties -- + +CREATE OR REPLACE RULE material_properties_update AS + ON UPDATE TO material_properties + WHERE (OLD.VALUE IS NOT NULL AND decode(replace(substring(OLD.value from 1 for 1), '\', '\\'), 'escape') != E'\\xefbfbd' AND OLD.VALUE != NEW.VALUE) + OR (OLD.CVTE_ID IS NOT NULL AND OLD.CVTE_ID != NEW.CVTE_ID) + OR (OLD.MATE_PROP_ID IS NOT NULL AND OLD.MATE_PROP_ID != NEW.MATE_PROP_ID) + DO ALSO + INSERT INTO material_properties_history ( + ID, + MATE_ID, + MTPT_ID, + VALUE, + VOCABULARY_TERM, + MATERIAL, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + VALID_UNTIL_TIMESTAMP + ) VALUES ( + nextval('MATERIAL_PROPERTY_ID_SEQ'), + OLD.MATE_ID, + OLD.MTPT_ID, + OLD.VALUE, + (select (t.code || ' [' || v.code || ']') from controlled_vocabulary_terms as t join controlled_vocabularies as v on t.covo_id = v.id where t.id = OLD.CVTE_ID), + (select (m.code || ' [' || mt.code || ']') from materials as m join material_types as mt on m.maty_id = mt.id where m.id = OLD.MATE_PROP_ID), + OLD.PERS_ID_AUTHOR, + OLD.MODIFICATION_TIMESTAMP, + current_timestamp + ); + +CREATE OR REPLACE RULE material_properties_delete AS + ON DELETE TO material_properties + WHERE (OLD.VALUE IS NOT NULL AND decode(replace(substring(OLD.value from 1 for 1), '\', '\\'), 'escape') != E'\\xefbfbd') + OR OLD.CVTE_ID IS NOT NULL + OR OLD.MATE_PROP_ID IS NOT NULL + DO ALSO + INSERT INTO material_properties_history ( + ID, + MATE_ID, + MTPT_ID, + VALUE, + VOCABULARY_TERM, + MATERIAL, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + VALID_UNTIL_TIMESTAMP + ) VALUES ( + nextval('MATERIAL_PROPERTY_ID_SEQ'), + OLD.MATE_ID, + OLD.MTPT_ID, + OLD.VALUE, + (select (t.code || ' [' || v.code || ']') from controlled_vocabulary_terms as t join controlled_vocabularies as v on t.covo_id = v.id where t.id = OLD.CVTE_ID), + (select (m.code || ' [' || mt.code || ']') from materials as m join material_types as mt on m.maty_id = mt.id where m.id = OLD.MATE_PROP_ID), + OLD.PERS_ID_AUTHOR, + OLD.MODIFICATION_TIMESTAMP, + current_timestamp + ); + +-- Experiment Properties -- + +CREATE OR REPLACE RULE experiment_properties_update AS + ON UPDATE TO experiment_properties + WHERE (OLD.VALUE IS NOT NULL AND decode(replace(substring(OLD.value from 1 for 1), '\', '\\'), 'escape') != E'\\xefbfbd' AND OLD.VALUE != NEW.VALUE) + OR (OLD.CVTE_ID IS NOT NULL AND OLD.CVTE_ID != NEW.CVTE_ID) + OR (OLD.MATE_PROP_ID IS NOT NULL AND OLD.MATE_PROP_ID != NEW.MATE_PROP_ID) + DO ALSO + INSERT INTO experiment_properties_history ( + ID, + EXPE_ID, + ETPT_ID, + VALUE, + VOCABULARY_TERM, + MATERIAL, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + VALID_UNTIL_TIMESTAMP + ) VALUES ( + nextval('EXPERIMENT_PROPERTY_ID_SEQ'), + OLD.EXPE_ID, + OLD.ETPT_ID, + OLD.VALUE, + (select (t.code || ' [' || v.code || ']') from controlled_vocabulary_terms as t join controlled_vocabularies as v on t.covo_id = v.id where t.id = OLD.CVTE_ID), + (select (m.code || ' [' || mt.code || ']') from materials as m join material_types as mt on m.maty_id = mt.id where m.id = OLD.MATE_PROP_ID), + OLD.PERS_ID_AUTHOR, + OLD.MODIFICATION_TIMESTAMP, + current_timestamp + ); + +CREATE OR REPLACE RULE experiment_properties_delete AS + ON DELETE TO experiment_properties + WHERE (OLD.VALUE IS NOT NULL AND decode(replace(substring(OLD.value from 1 for 1), '\', '\\'), 'escape') != E'\\xefbfbd') + OR OLD.CVTE_ID IS NOT NULL + OR OLD.MATE_PROP_ID IS NOT NULL + DO ALSO + INSERT INTO experiment_properties_history ( + ID, + EXPE_ID, + ETPT_ID, + VALUE, + VOCABULARY_TERM, + MATERIAL, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + VALID_UNTIL_TIMESTAMP + ) VALUES ( + nextval('EXPERIMENT_PROPERTY_ID_SEQ'), + OLD.EXPE_ID, + OLD.ETPT_ID, + OLD.VALUE, + (select (t.code || ' [' || v.code || ']') from controlled_vocabulary_terms as t join controlled_vocabularies as v on t.covo_id = v.id where t.id = OLD.CVTE_ID), + (select (m.code || ' [' || mt.code || ']') from materials as m join material_types as mt on m.maty_id = mt.id where m.id = OLD.MATE_PROP_ID), + OLD.PERS_ID_AUTHOR, + OLD.MODIFICATION_TIMESTAMP, + current_timestamp + ); + +-- Sample Properties -- + +CREATE OR REPLACE RULE sample_properties_update AS + ON UPDATE TO sample_properties + WHERE (OLD.VALUE IS NOT NULL AND decode(replace(substring(OLD.value from 1 for 1), '\', '\\'), 'escape') != E'\\xefbfbd' AND OLD.VALUE != NEW.VALUE) + OR (OLD.CVTE_ID IS NOT NULL AND OLD.CVTE_ID != NEW.CVTE_ID) + OR (OLD.MATE_PROP_ID IS NOT NULL AND OLD.MATE_PROP_ID != NEW.MATE_PROP_ID) + DO ALSO + INSERT INTO sample_properties_history ( + ID, + SAMP_ID, + STPT_ID, + VALUE, + VOCABULARY_TERM, + MATERIAL, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + VALID_UNTIL_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_PROPERTY_ID_SEQ'), + OLD.SAMP_ID, + OLD.STPT_ID, + OLD.VALUE, + (select (t.code || ' [' || v.code || ']') from controlled_vocabulary_terms as t join controlled_vocabularies as v on t.covo_id = v.id where t.id = OLD.CVTE_ID), + (select (m.code || ' [' || mt.code || ']') from materials as m join material_types as mt on m.maty_id = mt.id where m.id = OLD.MATE_PROP_ID), + OLD.PERS_ID_AUTHOR, + OLD.MODIFICATION_TIMESTAMP, + current_timestamp + ); + +CREATE OR REPLACE RULE sample_properties_delete AS + ON DELETE TO sample_properties + WHERE ((OLD.VALUE IS NOT NULL AND decode(replace(substring(OLD.value from 1 for 1), '\', '\\'), 'escape') != E'\\xefbfbd') + OR OLD.CVTE_ID IS NOT NULL + OR OLD.MATE_PROP_ID IS NOT NULL) + AND (SELECT DEL_ID FROM SAMPLES_ALL WHERE ID = OLD.SAMP_ID) IS NULL + DO ALSO + INSERT INTO sample_properties_history ( + ID, + SAMP_ID, + STPT_ID, + VALUE, + VOCABULARY_TERM, + MATERIAL, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + VALID_UNTIL_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_PROPERTY_ID_SEQ'), + OLD.SAMP_ID, + OLD.STPT_ID, + OLD.VALUE, + (select (t.code || ' [' || v.code || ']') from controlled_vocabulary_terms as t join controlled_vocabularies as v on t.covo_id = v.id where t.id = OLD.CVTE_ID), + (select (m.code || ' [' || mt.code || ']') from materials as m join material_types as mt on m.maty_id = mt.id where m.id = OLD.MATE_PROP_ID), + OLD.PERS_ID_AUTHOR, + OLD.MODIFICATION_TIMESTAMP, + current_timestamp + ); + +-- Data Set Properties -- + +CREATE OR REPLACE RULE data_set_properties_update AS + ON UPDATE TO data_set_properties + WHERE (OLD.VALUE IS NOT NULL AND decode(replace(substring(OLD.value from 1 for 1), '\', '\\'), 'escape') != E'\\xefbfbd' AND OLD.VALUE != NEW.VALUE) + OR (OLD.CVTE_ID IS NOT NULL AND OLD.CVTE_ID != NEW.CVTE_ID) + OR (OLD.MATE_PROP_ID IS NOT NULL AND OLD.MATE_PROP_ID != NEW.MATE_PROP_ID) + DO ALSO + INSERT INTO data_set_properties_history ( + ID, + DS_ID, + DSTPT_ID, + VALUE, + VOCABULARY_TERM, + MATERIAL, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + VALID_UNTIL_TIMESTAMP + ) VALUES ( + nextval('DATA_SET_PROPERTY_ID_SEQ'), + OLD.DS_ID, + OLD.DSTPT_ID, + OLD.VALUE, + (select (t.code || ' [' || v.code || ']') from controlled_vocabulary_terms as t join controlled_vocabularies as v on t.covo_id = v.id where t.id = OLD.CVTE_ID), + (select (m.code || ' [' || mt.code || ']') from materials as m join material_types as mt on m.maty_id = mt.id where m.id = OLD.MATE_PROP_ID), + OLD.PERS_ID_AUTHOR, + OLD.MODIFICATION_TIMESTAMP, + current_timestamp + ); + +CREATE OR REPLACE RULE data_set_properties_delete AS + ON DELETE TO data_set_properties + WHERE ((OLD.VALUE IS NOT NULL AND decode(replace(substring(OLD.value from 1 for 1), '\', '\\'), 'escape') != E'\\xefbfbd') + OR OLD.CVTE_ID IS NOT NULL + OR OLD.MATE_PROP_ID IS NOT NULL) + AND (SELECT DEL_ID FROM DATA_ALL WHERE ID = OLD.DS_ID) IS NULL + DO ALSO + INSERT INTO data_set_properties_history ( + ID, + DS_ID, + DSTPT_ID, + VALUE, + VOCABULARY_TERM, + MATERIAL, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + VALID_UNTIL_TIMESTAMP + ) VALUES ( + nextval('DATA_SET_PROPERTY_ID_SEQ'), + OLD.DS_ID, + OLD.DSTPT_ID, + OLD.VALUE, + (select (t.code || ' [' || v.code || ']') from controlled_vocabulary_terms as t join controlled_vocabularies as v on t.covo_id = v.id where t.id = OLD.CVTE_ID), + (select (m.code || ' [' || mt.code || ']') from materials as m join material_types as mt on m.maty_id = mt.id where m.id = OLD.MATE_PROP_ID), + OLD.PERS_ID_AUTHOR, + OLD.MODIFICATION_TIMESTAMP, + current_timestamp + ); + +-- End of rules for properties history + +CREATE OR REPLACE RULE data_set_relationships_insert AS + ON INSERT TO data_set_relationships DO INSTEAD + INSERT INTO data_set_relationships_all ( + data_id_parent, + data_id_child, + pers_id_author, + registration_timestamp, + modification_timestamp + ) VALUES ( + NEW.data_id_parent, + NEW.data_id_child, + NEW.pers_id_author, + NEW.registration_timestamp, + NEW.modification_timestamp + ); + +CREATE OR REPLACE RULE data_set_relationships_update AS + ON UPDATE TO data_set_relationships DO INSTEAD + UPDATE data_set_relationships_all + SET + data_id_parent = NEW.data_id_parent, + data_id_child = NEW.data_id_child, + del_id = NEW.del_id, + pers_id_author = NEW.pers_id_author, + registration_timestamp = NEW.registration_timestamp, + modification_timestamp = NEW.modification_timestamp + WHERE data_id_parent = NEW.data_id_parent and data_id_child = NEW.data_id_child; + +CREATE OR REPLACE RULE data_set_relationships_delete AS + ON DELETE TO data_set_relationships DO INSTEAD + DELETE FROM data_set_relationships_all + WHERE data_id_parent = OLD.data_id_parent and data_id_child = OLD.data_id_child; + +CREATE OR REPLACE RULE sample_relationships_insert AS + ON INSERT TO sample_relationships DO INSTEAD + INSERT INTO sample_relationships_all ( + id, + sample_id_parent, + relationship_id, + sample_id_child, + pers_id_author, + registration_timestamp, + modification_timestamp + ) VALUES ( + NEW.id, + NEW.sample_id_parent, + NEW.relationship_id, + NEW.sample_id_child, + NEW.pers_id_author, + NEW.registration_timestamp, + NEW.modification_timestamp + ); + +CREATE OR REPLACE RULE sample_relationships_update AS + ON UPDATE TO sample_relationships DO INSTEAD + UPDATE sample_relationships_all + SET + sample_id_parent = NEW.sample_id_parent, + relationship_id = NEW.relationship_id, + sample_id_child = NEW.sample_id_child, + del_id = NEW.del_id, + pers_id_author = NEW.pers_id_author, + registration_timestamp = NEW.registration_timestamp, + modification_timestamp = NEW.modification_timestamp + WHERE id = NEW.id; + +CREATE OR REPLACE RULE sample_relationships_delete AS + ON DELETE TO sample_relationships DO INSTEAD + DELETE FROM sample_relationships_all + WHERE id = OLD.id; + +CREATE OR REPLACE RULE METAPROJECT_ASSIGNMENTS_INSERT AS + ON INSERT TO METAPROJECT_ASSIGNMENTS DO INSTEAD + INSERT INTO METAPROJECT_ASSIGNMENTS_ALL ( + ID, + MEPR_ID, + EXPE_ID, + SAMP_ID, + DATA_ID, + MATE_ID, + DEL_ID, + CREATION_DATE + ) VALUES ( + NEW.ID, + NEW.MEPR_ID, + NEW.EXPE_ID, + NEW.SAMP_ID, + NEW.DATA_ID, + NEW.MATE_ID, + NEW.DEL_ID, + NEW.CREATION_DATE + ); + +CREATE OR REPLACE RULE METAPROJECT_ASSIGNMENTS_UPDATE AS + ON UPDATE TO METAPROJECT_ASSIGNMENTS DO INSTEAD + UPDATE METAPROJECT_ASSIGNMENTS_ALL + SET + ID = NEW.ID, + MEPR_ID = NEW.MEPR_ID, + EXPE_ID = NEW.EXPE_ID, + SAMP_ID = NEW.SAMP_ID, + DATA_ID = NEW.DATA_ID, + MATE_ID = NEW.MATE_ID, + DEL_ID = NEW.DEL_ID, + CREATION_DATE = NEW.CREATION_DATE + WHERE ID = NEW.ID; + +CREATE OR REPLACE RULE METAPROJECT_ASSIGNMENTS_DELETE AS + ON DELETE TO METAPROJECT_ASSIGNMENTS DO INSTEAD + DELETE FROM METAPROJECT_ASSIGNMENTS_ALL + WHERE ID = OLD.ID; + +---------------------------------------------------------------------------------------------------- +-- Rules for relationships history +---------------------------------------------------------------------------------------------------- + +-- sample -> experiment + +CREATE OR REPLACE RULE sample_experiment_update AS + ON UPDATE TO samples_all + WHERE (OLD.EXPE_ID != NEW.EXPE_ID OR OLD.EXPE_ID IS NULL) AND NEW.EXPE_ID IS NOT NULL + DO ALSO ( + UPDATE EXPERIMENT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_EXPE_ID = OLD.EXPE_ID AND SAMP_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + INSERT INTO EXPERIMENT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_EXPE_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('EXPERIMENT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.EXPE_ID, + 'OWNER', + NEW.ID, + NEW.PERM_ID, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_SAMP_ID = OLD.ID AND EXPE_ID = OLD.EXPE_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + EXPE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.EXPE_ID, + (SELECT PERM_ID FROM EXPERIMENTS_ALL WHERE ID = NEW.EXPE_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE sample_experiment_remove_update AS + ON UPDATE TO samples_all + WHERE OLD.EXPE_ID IS NOT NULL AND NEW.EXPE_ID IS NULL + DO ALSO ( + UPDATE EXPERIMENT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_EXPE_ID = OLD.EXPE_ID AND SAMP_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_SAMP_ID = OLD.ID AND EXPE_ID = OLD.EXPE_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + ); + +CREATE OR REPLACE RULE sample_experiment_insert AS + ON INSERT TO samples_all + WHERE NEW.EXPE_ID IS NOT NULL + DO ALSO ( + INSERT INTO EXPERIMENT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_EXPE_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('EXPERIMENT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.EXPE_ID, + 'OWNER', + NEW.ID, + NEW.PERM_ID, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + EXPE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.EXPE_ID, + (SELECT PERM_ID FROM EXPERIMENTS_ALL WHERE ID = NEW.EXPE_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE sample_experiment_delete AS + ON DELETE TO samples_all + WHERE OLD.EXPE_ID IS NOT NULL + DO ALSO + UPDATE EXPERIMENT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE MAIN_EXPE_ID = OLD.EXPE_ID AND SAMP_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + +-- container samples + +CREATE OR REPLACE RULE sample_container_update AS + ON UPDATE TO samples_all + WHERE (OLD.SAMP_ID_PART_OF != NEW.SAMP_ID_PART_OF OR OLD.SAMP_ID_PART_OF IS NULL) AND NEW.SAMP_ID_PART_OF IS NOT NULL + DO ALSO ( + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE (MAIN_SAMP_ID = OLD.SAMP_ID_PART_OF AND SAMP_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL AND RELATION_TYPE = 'CONTAINER') + OR (MAIN_SAMP_ID = OLD.ID AND SAMP_ID = OLD.SAMP_ID_PART_OF AND VALID_UNTIL_TIMESTAMP IS NULL AND RELATION_TYPE = 'CONTAINED'); + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.SAMP_ID_PART_OF, + 'CONTAINER', + NEW.ID, + NEW.PERM_ID, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'CONTAINED', + NEW.SAMP_ID_PART_OF, + (SELECT PERM_ID FROM SAMPLES_ALL WHERE ID = NEW.SAMP_ID_PART_OF), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE sample_container_remove_update AS + ON UPDATE TO samples_all + WHERE OLD.SAMP_ID_PART_OF IS NOT NULL AND NEW.SAMP_ID_PART_OF IS NULL + DO ALSO ( + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE (MAIN_SAMP_ID = OLD.SAMP_ID_PART_OF AND SAMP_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL AND RELATION_TYPE = 'CONTAINER') + OR (MAIN_SAMP_ID = OLD.ID AND SAMP_ID = OLD.SAMP_ID_PART_OF AND VALID_UNTIL_TIMESTAMP IS NULL AND RELATION_TYPE = 'CONTAINED'); + ); + +CREATE OR REPLACE RULE sample_container_insert AS + ON INSERT TO samples_all + WHERE NEW.SAMP_ID_PART_OF IS NOT NULL + DO ALSO ( + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.SAMP_ID_PART_OF, + 'CONTAINER', + NEW.ID, + NEW.PERM_ID, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'CONTAINED', + NEW.SAMP_ID_PART_OF, + (SELECT PERM_ID FROM SAMPLES_ALL WHERE ID = NEW.SAMP_ID_PART_OF), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE sample_container_delete AS + ON DELETE TO samples_all + WHERE OLD.SAMP_ID_PART_OF IS NOT NULL + DO ALSO + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE MAIN_SAMP_ID = OLD.SAMP_ID_PART_OF AND SAMP_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL AND RELATION_TYPE = 'CONTAINER'; + +-- dataset -> eperiment + +CREATE OR REPLACE RULE dataset_experiment_update AS + ON UPDATE TO data_all + WHERE (OLD.EXPE_ID != NEW.EXPE_ID OR OLD.SAMP_ID IS NOT NULL) AND NEW.SAMP_ID IS NULL + DO ALSO ( + UPDATE EXPERIMENT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_EXPE_ID = OLD.EXPE_ID AND DATA_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + INSERT INTO EXPERIMENT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_EXPE_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('EXPERIMENT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.EXPE_ID, + 'OWNER', + NEW.ID, + NEW.CODE, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE (MAIN_DATA_ID = OLD.ID AND EXPE_ID = OLD.EXPE_ID AND VALID_UNTIL_TIMESTAMP IS NULL); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + EXPE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.EXPE_ID, + (SELECT PERM_ID FROM EXPERIMENTS_ALL WHERE ID = NEW.EXPE_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE dataset_experiment_remove_update AS + ON UPDATE TO data_all + WHERE OLD.SAMP_ID IS NULL AND NEW.SAMP_ID IS NOT NULL + DO ALSO ( + UPDATE EXPERIMENT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_EXPE_ID = OLD.EXPE_ID AND DATA_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_DATA_ID = OLD.ID AND EXPE_ID = OLD.EXPE_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + ); + +CREATE OR REPLACE RULE dataset_experiment_insert AS + ON INSERT TO data_all + WHERE NEW.EXPE_ID IS NOT NULL AND NEW.SAMP_ID IS NULL + DO ALSO ( + INSERT INTO EXPERIMENT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_EXPE_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('EXPERIMENT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.EXPE_ID, + 'OWNER', + NEW.ID, + NEW.CODE, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + EXPE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.EXPE_ID, + (SELECT PERM_ID FROM EXPERIMENTS_ALL WHERE ID = NEW.EXPE_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE dataset_experiment_delete AS + ON DELETE TO data_all + WHERE OLD.EXPE_ID IS NOT NULL AND OLD.SAMP_ID IS NULL + DO ALSO + UPDATE EXPERIMENT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE MAIN_EXPE_ID = OLD.EXPE_ID AND DATA_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + +-- dataset -> sample + +CREATE OR REPLACE RULE dataset_sample_update AS + ON UPDATE TO data_all + WHERE (OLD.SAMP_ID != NEW.SAMP_ID OR OLD.SAMP_ID IS NULL) AND NEW.SAMP_ID IS NOT NULL + DO ALSO ( + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_SAMP_ID = OLD.SAMP_ID AND DATA_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.SAMP_ID, + 'OWNER', + NEW.ID, + NEW.CODE, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE (MAIN_DATA_ID = OLD.ID AND SAMP_ID = OLD.SAMP_ID AND VALID_UNTIL_TIMESTAMP IS NULL); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.SAMP_ID, + (SELECT PERM_ID FROM SAMPLES_ALL WHERE ID = NEW.SAMP_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE dataset_sample_remove_update AS + ON UPDATE TO data_all + WHERE OLD.SAMP_ID IS NOT NULL AND NEW.SAMP_ID IS NULL + DO ALSO ( + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_SAMP_ID = OLD.SAMP_ID AND DATA_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_DATA_ID = OLD.ID AND SAMP_ID = OLD.SAMP_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + ); + +CREATE OR REPLACE RULE dataset_sample_insert AS + ON INSERT TO data_all + WHERE NEW.SAMP_ID IS NOT NULL + DO ALSO ( + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.SAMP_ID, + 'OWNER', + NEW.ID, + NEW.CODE, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.SAMP_ID, + (SELECT PERM_ID FROM SAMPLES_ALL WHERE ID = NEW.SAMP_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE dataset_sample_delete AS + ON DELETE TO data_all + WHERE OLD.SAMP_ID IS NOT NULL + DO ALSO + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE MAIN_SAMP_ID = OLD.SAMP_ID AND DATA_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + +-- data set relationship + +CREATE OR REPLACE RULE data_relationship_insert AS + ON INSERT TO data_set_relationships_all + WHERE NEW.DEL_ID IS NULL + DO ALSO ( + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_PARENT, + (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_CHILD, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_CHILD), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_CHILD, + (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_PARENT, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_PARENT), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + ); + +CREATE OR REPLACE RULE data_relationship_delete AS + ON DELETE TO data_set_relationships_all + WHERE OLD.DEL_ID IS NULL + DO ALSO ( + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE (MAIN_DATA_ID = OLD.DATA_ID_PARENT + AND DATA_ID = OLD.DATA_ID_CHILD + AND RELATION_TYPE = (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL) + OR (MAIN_DATA_ID = OLD.DATA_ID_CHILD + AND DATA_ID = OLD.DATA_ID_PARENT + AND RELATION_TYPE = (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL); + ); + +CREATE OR REPLACE RULE data_relationship_update AS + ON UPDATE TO data_set_relationships_all + WHERE NEW.DEL_ID IS NULL AND OLD.DEL_ID IS NULL + DO ALSO ( + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE (MAIN_DATA_ID = OLD.DATA_ID_PARENT + AND DATA_ID = OLD.DATA_ID_CHILD + AND RELATION_TYPE = (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL) + OR (MAIN_DATA_ID = OLD.DATA_ID_CHILD + AND DATA_ID = OLD.DATA_ID_PARENT + AND RELATION_TYPE = (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_PARENT, + (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_CHILD, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_CHILD), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_CHILD, + (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_PARENT, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_PARENT), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + ); + +CREATE OR REPLACE RULE data_relationship_trash_update AS + ON UPDATE TO data_set_relationships_all + WHERE NEW.DEL_ID IS NOT NULL AND OLD.DEL_ID IS NULL + DO ALSO ( + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE (MAIN_DATA_ID = OLD.DATA_ID_PARENT + AND DATA_ID = OLD.DATA_ID_CHILD + AND RELATION_TYPE = (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL) + OR (MAIN_DATA_ID = OLD.DATA_ID_CHILD + AND DATA_ID = OLD.DATA_ID_PARENT + AND RELATION_TYPE = (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL); + ); + +CREATE OR REPLACE RULE data_relationship_trash_revert_update AS + ON UPDATE TO data_set_relationships_all + WHERE OLD.DEL_ID IS NOT NULL AND NEW.DEL_ID IS NULL + DO ALSO ( + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_PARENT, + (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_CHILD, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_CHILD), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_CHILD, + (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_PARENT, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_PARENT), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + ); + +-- samples parent-child relationship + +CREATE OR REPLACE RULE sample_parent_child_insert AS + ON INSERT TO sample_relationships_all + WHERE NEW.DEL_ID IS NULL + DO ALSO ( + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.SAMPLE_ID_PARENT, + 'PARENT', + NEW.SAMPLE_ID_CHILD, + (SELECT PERM_ID FROM samples_all WHERE ID = NEW.SAMPLE_ID_CHILD), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP + ); + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.SAMPLE_ID_CHILD, + 'CHILD', + NEW.SAMPLE_ID_PARENT, + (SELECT PERM_ID FROM samples_all WHERE ID = NEW.SAMPLE_ID_PARENT), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE sample_parent_child_delete AS + ON DELETE TO sample_relationships_all + WHERE OLD.DEL_ID IS NULL + DO ALSO ( + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE (MAIN_SAMP_ID = OLD.SAMPLE_ID_PARENT AND SAMP_ID = OLD.SAMPLE_ID_CHILD AND VALID_UNTIL_TIMESTAMP IS NULL) + OR (MAIN_SAMP_ID = OLD.SAMPLE_ID_CHILD AND SAMP_ID = OLD.SAMPLE_ID_PARENT AND VALID_UNTIL_TIMESTAMP IS NULL); + ); + +CREATE OR REPLACE RULE sample_parent_child_update AS + ON UPDATE TO sample_relationships_all + WHERE NEW.DEL_ID IS NOT NULL AND OLD.DEL_ID IS NULL + DO ALSO ( + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE (MAIN_SAMP_ID = OLD.SAMPLE_ID_PARENT AND SAMP_ID = OLD.SAMPLE_ID_CHILD AND VALID_UNTIL_TIMESTAMP IS NULL) + OR (MAIN_SAMP_ID = OLD.SAMPLE_ID_CHILD AND SAMP_ID = OLD.SAMPLE_ID_PARENT AND VALID_UNTIL_TIMESTAMP IS NULL); + ); + +CREATE OR REPLACE RULE sample_parent_child_revert_update AS + ON UPDATE TO sample_relationships_all + WHERE NEW.DEL_ID IS NULL AND OLD.DEL_ID IS NOT NULL + DO ALSO ( + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.SAMPLE_ID_PARENT, + 'PARENT', + NEW.SAMPLE_ID_CHILD, + (SELECT PERM_ID FROM samples_all WHERE ID = NEW.SAMPLE_ID_CHILD), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP + ); + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SAMP_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.SAMPLE_ID_CHILD, + 'CHILD', + NEW.SAMPLE_ID_PARENT, + (SELECT PERM_ID FROM samples_all WHERE ID = NEW.SAMPLE_ID_PARENT), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +-- experiment -> project + +CREATE OR REPLACE RULE experiment_project_update AS + ON UPDATE TO experiments_all + WHERE (OLD.PROJ_ID != NEW.PROJ_ID OR OLD.PROJ_ID IS NULL) AND NEW.PROJ_ID IS NOT NULL + DO ALSO ( + UPDATE PROJECT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_PROJ_ID = OLD.PROJ_ID AND EXPE_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + INSERT INTO PROJECT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_PROJ_ID, + RELATION_TYPE, + EXPE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('PROJECT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.PROJ_ID, + 'OWNER', + NEW.ID, + NEW.PERM_ID, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + UPDATE EXPERIMENT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_EXPE_ID = OLD.ID AND PROJ_ID = OLD.PROJ_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + INSERT INTO EXPERIMENT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_EXPE_ID, + RELATION_TYPE, + PROJ_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('EXPERIMENT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.PROJ_ID, + (SELECT CODE FROM PROJECTS WHERE ID = NEW.PROJ_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE experiment_project_remove_update AS + ON UPDATE TO experiments_all + WHERE OLD.PROJ_ID IS NOT NULL AND NEW.PROJ_ID IS NULL + DO ALSO ( + UPDATE PROJECT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_PROJ_ID = OLD.PROJ_ID AND EXPE_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + UPDATE EXPERIMENT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_EXPE_ID = OLD.ID AND PROJ_ID = OLD.PROJ_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + ); + +CREATE OR REPLACE RULE experiment_project_insert AS + ON INSERT TO experiments_all + WHERE NEW.PROJ_ID IS NOT NULL + DO ALSO ( + INSERT INTO PROJECT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_PROJ_ID, + RELATION_TYPE, + EXPE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('PROJECT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.PROJ_ID, + 'OWNER', + NEW.ID, + NEW.PERM_ID, + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + INSERT INTO EXPERIMENT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_EXPE_ID, + RELATION_TYPE, + PROJ_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('EXPERIMENT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.PROJ_ID, + (SELECT CODE FROM PROJECTS WHERE ID = NEW.PROJ_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE experiment_project_delete AS + ON DELETE TO experiments_all + WHERE OLD.PROJ_ID IS NOT NULL + DO ALSO + UPDATE PROJECT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE MAIN_PROJ_ID = OLD.PROJ_ID AND EXPE_ID = OLD.ID AND VALID_UNTIL_TIMESTAMP IS NULL; + +-- project -> space + +CREATE OR REPLACE RULE project_space_update AS + ON UPDATE TO projects + WHERE (OLD.SPACE_ID != NEW.SPACE_ID OR OLD.SPACE_ID IS NULL) AND NEW.SPACE_ID IS NOT NULL + DO ALSO ( + UPDATE PROJECT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_PROJ_ID = OLD.ID AND SPACE_ID = OLD.SPACE_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + INSERT INTO PROJECT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_PROJ_ID, + RELATION_TYPE, + SPACE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('PROJECT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.SPACE_ID, + (SELECT CODE FROM SPACES WHERE ID = NEW.SPACE_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE project_space_remove_update AS + ON UPDATE TO projects + WHERE OLD.SPACE_ID IS NOT NULL AND NEW.SPACE_ID IS NULL + DO ALSO ( + UPDATE PROJECT_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_PROJ_ID = OLD.ID AND SPACE_ID = OLD.SPACE_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + ); + +CREATE OR REPLACE RULE project_space_insert AS + ON INSERT TO projects + WHERE NEW.SPACE_ID IS NOT NULL + DO ALSO ( + INSERT INTO PROJECT_RELATIONSHIPS_HISTORY ( + ID, + MAIN_PROJ_ID, + RELATION_TYPE, + SPACE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('PROJECT_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.SPACE_ID, + (SELECT CODE FROM SPACES WHERE ID = NEW.SPACE_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +-- sample -> space + +CREATE OR REPLACE RULE sample_space_update AS + ON UPDATE TO samples_all + WHERE (OLD.SPACE_ID != NEW.SPACE_ID OR OLD.SPACE_ID IS NULL OR OLD.EXPE_ID IS NOT NULL) AND NEW.SPACE_ID IS NOT NULL AND NEW.EXPE_ID IS NULL + DO ALSO ( + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_SAMP_ID = OLD.ID AND SPACE_ID = OLD.SPACE_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SPACE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.SPACE_ID, + (SELECT CODE FROM SPACES WHERE ID = NEW.SPACE_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); + +CREATE OR REPLACE RULE sample_space_remove_update AS + ON UPDATE TO samples_all + WHERE OLD.SPACE_ID IS NOT NULL AND (NEW.SPACE_ID IS NULL OR (OLD.EXPE_ID IS NULL AND NEW.EXPE_ID IS NOT NULL)) + DO ALSO ( + UPDATE SAMPLE_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = NEW.MODIFICATION_TIMESTAMP + WHERE MAIN_SAMP_ID = OLD.ID AND SPACE_ID = OLD.SPACE_ID AND VALID_UNTIL_TIMESTAMP IS NULL; + ); + +CREATE OR REPLACE RULE sample_space_insert AS + ON INSERT TO samples_all + WHERE NEW.EXPE_ID IS NULL AND NEW.SPACE_ID IS NOT NULL + DO ALSO ( + INSERT INTO SAMPLE_RELATIONSHIPS_HISTORY ( + ID, + MAIN_SAMP_ID, + RELATION_TYPE, + SPACE_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP + ) VALUES ( + nextval('SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.ID, + 'OWNED', + NEW.SPACE_ID, + (SELECT CODE FROM SPACES WHERE ID = NEW.SPACE_ID), + NEW.PERS_ID_MODIFIER, + NEW.MODIFICATION_TIMESTAMP + ); + ); +-- end of rules for relationships history \ No newline at end of file diff --git a/openbis/source/sql/postgresql/138/grants-138.sql b/openbis/source/sql/postgresql/138/grants-138.sql new file mode 100644 index 0000000000000000000000000000000000000000..02917a856675f7e46d526de70065d36e1559c5b1 --- /dev/null +++ b/openbis/source/sql/postgresql/138/grants-138.sql @@ -0,0 +1,129 @@ +-- Granting SELECT privilege to group OPENBIS_READONLY + +GRANT SELECT ON SEQUENCE attachment_content_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE attachment_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE code_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE experiment_code_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE sample_code_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE controlled_vocabulary_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE core_plugin_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE cvte_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE data_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE data_set_property_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE data_set_relationship_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE data_set_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE data_store_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE DATA_STORE_SERVICES_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE data_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE database_instance_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE dstpt_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE etpt_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE event_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE experiment_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE experiment_property_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE experiment_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE file_format_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE space_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE deletion_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE locator_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE material_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE material_property_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE material_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE mtpt_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE perm_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE person_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE project_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE property_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE role_assignment_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE sample_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE sample_property_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE sample_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE stpt_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE authorization_group_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE filter_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE query_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE POST_REGISTRATION_DATASET_QUEUE_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE ENTITY_OPERATIONS_LOG_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE EXPERIMENT_RELATIONSHIPS_HISTORY_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE SAMPLE_RELATIONSHIPS_HISTORY_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE PROJECT_RELATIONSHIPS_HISTORY_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE EXTERNAL_DATA_MANAGEMENT_SYSTEM_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE METAPROJECT_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE METAPROJECT_ASSIGNMENT_ID_SEQ TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE grid_custom_columns_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE sample_relationship_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE script_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON SEQUENCE relationship_type_id_seq TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE attachment_contents TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE attachments TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE controlled_vocabularies TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE controlled_vocabulary_terms TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE core_plugins TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE data_all TO GROUP OPENBIS_READONLY; +GRANT SELECT ON data TO GROUP OPENBIS_READONLY; +GRANT SELECT ON data_deleted TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE data_set_properties TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE data_set_properties_history TO GROUP OPENBIS_READONLY; +GRANT SELECT ON data_set_relationships TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE data_set_relationships_all TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE data_set_type_property_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE data_set_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE data_stores TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE data_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE DATA_STORE_SERVICES TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE DATA_STORE_SERVICE_DATA_SET_TYPES TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE database_instances TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE database_version_logs TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE events TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE experiment_properties TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE experiment_properties_history TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE experiment_type_property_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE experiment_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE experiments_all TO GROUP OPENBIS_READONLY; +GRANT SELECT ON experiments TO GROUP OPENBIS_READONLY; +GRANT SELECT ON experiments_deleted TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE external_data TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE file_format_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE spaces TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE deletions TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE locator_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE material_properties TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE material_properties_history TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE material_type_property_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE material_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE materials TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE persons TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE projects TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE property_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE role_assignments TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE sample_properties TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE sample_properties_history TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE sample_type_property_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE sample_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE samples_all TO GROUP OPENBIS_READONLY; +GRANT SELECT ON samples TO GROUP OPENBIS_READONLY; +GRANT SELECT ON samples_deleted TO GROUP OPENBIS_READONLY; +GRANT SELECT ON sample_relationships TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE sample_relationships_all TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE authorization_groups TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE authorization_group_persons TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE filters TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE queries TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE scripts TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE POST_REGISTRATION_DATASET_QUEUE TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE ENTITY_OPERATIONS_LOG TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE EXPERIMENT_RELATIONSHIPS_HISTORY TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE SAMPLE_RELATIONSHIPS_HISTORY TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE DATA_SET_RELATIONSHIPS_HISTORY TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE PROJECT_RELATIONSHIPS_HISTORY TO GROUP OPENBIS_READONLY; +GRANT SELECT ON sample_history_view TO GROUP OPENBIS_READONLY; +GRANT SELECT ON data_set_history_view TO GROUP OPENBIS_READONLY; +GRANT SELECT ON experiment_history_view TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE EXTERNAL_DATA_MANAGEMENT_SYSTEMS TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE LINK_DATA TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE grid_custom_columns TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE relationship_types TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE METAPROJECTS TO GROUP OPENBIS_READONLY; +GRANT SELECT ON TABLE METAPROJECT_ASSIGNMENTS_ALL TO GROUP OPENBIS_READONLY; +GRANT SELECT ON METAPROJECT_ASSIGNMENTS TO GROUP OPENBIS_READONLY; diff --git a/openbis/source/sql/postgresql/migration/migration-137-138.sql b/openbis/source/sql/postgresql/migration/migration-137-138.sql new file mode 100644 index 0000000000000000000000000000000000000000..89158cefce06c1e303d7a6d5aaba1740cbd19ad1 --- /dev/null +++ b/openbis/source/sql/postgresql/migration/migration-137-138.sql @@ -0,0 +1,272 @@ +-- Migration from 137 to 138 + +-- Migration to support data sets to be contained in more than one container. + +-- +-- New relation ship type +-- +insert into relationship_types +(id, +code, +label, +parent_label, +child_label, +description, +pers_id_registerer, +is_managed_internally, +is_internal_namespace, +dbin_id) +values +( +nextval('RELATIONSHIP_TYPE_ID_SEQ'), +'CONTAINER_COMPONENT', +'Container - Component', +'Container', +'Component', +'Container - Component relationship', +(select id from persons where user_id ='system'), +'T', +'T', +(select id from database_instances where is_original_source = 'T') +); + +-- +-- Extending data set relationships table with column for type and order +-- +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD COLUMN RELATIONSHIP_ID TECH_ID; +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD COLUMN ORDINAL INTEGER; +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD CONSTRAINT DSRE_DATA_FK_RELATIONSHIP FOREIGN KEY (RELATIONSHIP_ID) REFERENCES RELATIONSHIP_TYPES(ID); + +DROP VIEW data_set_relationships; +CREATE VIEW data_set_relationships AS + SELECT data_id_parent, data_id_child, relationship_id, ordinal, del_id, pers_id_author, registration_timestamp, modification_timestamp + FROM data_set_relationships_all + WHERE del_id IS NULL; + +UPDATE DATA_SET_RELATIONSHIPS_ALL SET RELATIONSHIP_ID = (select id from relationship_types where code = 'PARENT_CHILD'); +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ALTER COLUMN RELATIONSHIP_ID SET NOT NULL; +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL DROP CONSTRAINT DSRE_BK_UK; +ALTER TABLE DATA_SET_RELATIONSHIPS_ALL ADD CONSTRAINT DSRE_BK_UK UNIQUE(DATA_ID_CHILD,DATA_ID_PARENT,RELATIONSHIP_ID); + + + +-- +-- Migrate column CTNR_ID and CTNR_ORDER of DATA_ALL to DATA_SET_RELATIONSHIPS_ALL +-- + +INSERT INTO DATA_SET_RELATIONSHIPS_ALL +(data_id_parent, data_id_child, relationship_id, ordinal, pers_id_author, registration_timestamp, modification_timestamp) +SELECT ctnr_id, d.id, t.id, ctnr_order, p.id, d.registration_timestamp, d.modification_timestamp +FROM DATA_ALL as d, RELATIONSHIP_TYPES as t, PERSONS as p +WHERE p.user_id = 'system' and ctnr_id IS NOT NULL and t.code = 'CONTAINER_COMPONENT'; + +UPDATE DATA_ALL SET ctnr_id = NULL, ctnr_order = NULL WHERE ctnr_id IS NOT NULL; + +-- +-- Drop columns CTNR_ID and CTNR_ORDER in DATA +-- + +DROP VIEW data; +DROP VIEW data_deleted; +DROP RULE dataset_container_update ON data_all; +DROP RULE data_container_remove_update ON data_all; +DROP RULE data_container_insert ON data_all; +DROP RULE data_container_delete ON data_all; +DROP RULE data_parent_child_insert ON data_set_relationships_all; +DROP RULE data_parent_child_delete ON data_set_relationships_all; +DROP RULE data_parent_child_update ON data_set_relationships_all; +DROP RULE data_parent_child_revert_update ON data_set_relationships_all; + +ALTER TABLE DATA_ALL DROP COLUMN CTNR_ID; +ALTER TABLE DATA_ALL DROP COLUMN CTNR_ORDER; + +CREATE VIEW data AS + SELECT id, code, dsty_id, dast_id, expe_id, data_producer_code, production_timestamp, samp_id, registration_timestamp, pers_id_registerer, pers_id_modifier, is_placeholder, is_valid, modification_timestamp, is_derived, del_id, orig_del, version + FROM data_all + WHERE del_id IS NULL; + +CREATE VIEW data_deleted AS + SELECT id, code, dsty_id, dast_id, expe_id, data_producer_code, production_timestamp, samp_id, registration_timestamp, pers_id_registerer, pers_id_modifier, is_placeholder, is_valid, modification_timestamp, is_derived, del_id, orig_del, version + FROM data_all + WHERE del_id IS NOT NULL; + +-- +-- Add column ORDINAL to DATA_SET_RELATIONSHIPS_HISTORY +-- +ALTER TABLE DATA_SET_RELATIONSHIPS_HISTORY ADD COLUMN ORDINAL INTEGER; + +-- +-- Add rules for DATA_SET_RELATIONSHIPS_HISTORY +-- + +CREATE OR REPLACE RULE data_relationship_insert AS + ON INSERT TO data_set_relationships_all + WHERE NEW.DEL_ID IS NULL + DO ALSO ( + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_PARENT, + (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_CHILD, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_CHILD), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_CHILD, + (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_PARENT, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_PARENT), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + ); + +CREATE OR REPLACE RULE data_relationship_delete AS + ON DELETE TO data_set_relationships_all + WHERE OLD.DEL_ID IS NULL + DO ALSO ( + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE (MAIN_DATA_ID = OLD.DATA_ID_PARENT + AND DATA_ID = OLD.DATA_ID_CHILD + AND RELATION_TYPE = (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL) + OR (MAIN_DATA_ID = OLD.DATA_ID_CHILD + AND DATA_ID = OLD.DATA_ID_PARENT + AND RELATION_TYPE = (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL); + ); + +CREATE OR REPLACE RULE data_relationship_update AS + ON UPDATE TO data_set_relationships_all + WHERE NEW.DEL_ID IS NULL AND OLD.DEL_ID IS NULL + DO ALSO ( + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE (MAIN_DATA_ID = OLD.DATA_ID_PARENT + AND DATA_ID = OLD.DATA_ID_CHILD + AND RELATION_TYPE = (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL) + OR (MAIN_DATA_ID = OLD.DATA_ID_CHILD + AND DATA_ID = OLD.DATA_ID_PARENT + AND RELATION_TYPE = (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_PARENT, + (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_CHILD, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_CHILD), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_CHILD, + (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_PARENT, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_PARENT), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + ); + +CREATE OR REPLACE RULE data_relationship_trash_update AS + ON UPDATE TO data_set_relationships_all + WHERE NEW.DEL_ID IS NOT NULL AND OLD.DEL_ID IS NULL + DO ALSO ( + UPDATE DATA_SET_RELATIONSHIPS_HISTORY SET VALID_UNTIL_TIMESTAMP = current_timestamp + WHERE (MAIN_DATA_ID = OLD.DATA_ID_PARENT + AND DATA_ID = OLD.DATA_ID_CHILD + AND RELATION_TYPE = (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL) + OR (MAIN_DATA_ID = OLD.DATA_ID_CHILD + AND DATA_ID = OLD.DATA_ID_PARENT + AND RELATION_TYPE = (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = OLD.RELATIONSHIP_ID) + AND VALID_UNTIL_TIMESTAMP IS NULL); + ); + +CREATE OR REPLACE RULE data_relationship_trash_revert_update AS + ON UPDATE TO data_set_relationships_all + WHERE OLD.DEL_ID IS NOT NULL AND NEW.DEL_ID IS NULL + DO ALSO ( + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_PARENT, + (SELECT UPPER(PARENT_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_CHILD, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_CHILD), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + INSERT INTO DATA_SET_RELATIONSHIPS_HISTORY ( + ID, + MAIN_DATA_ID, + RELATION_TYPE, + DATA_ID, + ENTITY_PERM_ID, + PERS_ID_AUTHOR, + VALID_FROM_TIMESTAMP, + ORDINAL + ) VALUES ( + nextval('DATA_SET_RELATIONSHIPS_HISTORY_ID_SEQ'), + NEW.DATA_ID_CHILD, + (SELECT UPPER(CHILD_LABEL) FROM RELATIONSHIP_TYPES WHERE ID = NEW.RELATIONSHIP_ID), + NEW.DATA_ID_PARENT, + (SELECT CODE FROM data_all WHERE ID = NEW.DATA_ID_PARENT), + NEW.PERS_ID_AUTHOR, + NEW.MODIFICATION_TIMESTAMP, + NEW.ORDINAL + ); + ); +