From 476acf1453464f99b03b73ed4562fe1fde7642dc Mon Sep 17 00:00:00 2001
From: tpylak <tpylak>
Date: Wed, 14 Oct 2009 08:33:00 +0000
Subject: [PATCH] SE-145 set reprocess-faulty-datasets in yeastx integration
tests
SVN: 12960
---
.../datastore_server_yeastx/etc/service.properties | 12 ++++--------
1 file changed, 4 insertions(+), 8 deletions(-)
diff --git a/integration-tests/templates/datastore_server_yeastx/etc/service.properties b/integration-tests/templates/datastore_server_yeastx/etc/service.properties
index 78fa9d31e8c..f6175eac840 100644
--- a/integration-tests/templates/datastore_server_yeastx/etc/service.properties
+++ b/integration-tests/templates/datastore_server_yeastx/etc/service.properties
@@ -59,12 +59,6 @@ mail.smtp.host = file://${root}
# Valid only when auto-detection method is used to determine if an incoming data are ready to be processed.
quiet-period = 3
-# Specifies what should happen if an error occurs during dataset processing.
-# By default this flag is set to false and user has to modify the 'faulty paths file'
-# each time the faulty dataset should be processed again.
-# Set this flag to true if the processing should be repeated after some time without any manual intervention.
-reprocess-faulty-datasets = true
-
# ------------------------
inputs=main-thread, eicml-uploader, fiaml-uploader, quantml-uploader
@@ -86,6 +80,7 @@ main-thread.incoming-dir = ${root}/incoming
# The default value is 'marker-file'.
main-thread.incoming-data-completeness-condition = auto-detection
main-thread.incoming-dir.format =
+main-thread.reprocess-faulty-datasets = true
sample-name-property-code = samplename
experiment-name-property-code = name
@@ -142,7 +137,7 @@ main-thread.storage-processor.processor.processor = ch.systemsx.cisd.etlserver.D
eicml-uploader.incoming-dir = ${root}/incoming-eicml
eicml-uploader.incoming-data-completeness-condition = auto-detection
eicml-uploader.incoming-dir.format =
-
+eicml-uploader.reprocess-faulty-datasets = false
# The extractor class to use for code extraction
eicml-uploader.data-set-info-extractor = ch.systemsx.cisd.yeastx.etl.DataSetInfoExtractorYeastX
@@ -173,7 +168,7 @@ eicml-uploader.storage-processor.processor = ch.systemsx.cisd.etlserver.DefaultS
fiaml-uploader.incoming-dir = ${root}/incoming-fiaml
fiaml-uploader.incoming-data-completeness-condition = auto-detection
fiaml-uploader.incoming-dir.format =
-
+fiaml-uploader.reprocess-faulty-datasets = false
# The extractor class to use for code extraction
fiaml-uploader.data-set-info-extractor = ch.systemsx.cisd.yeastx.etl.DataSetInfoExtractorYeastX
@@ -204,6 +199,7 @@ fiaml-uploader.storage-processor.processor = ch.systemsx.cisd.etlserver.DefaultS
quantml-uploader.incoming-dir = ${root}/incoming-quantml
quantml-uploader.incoming-data-completeness-condition = auto-detection
quantml-uploader.incoming-dir.format =
+quantml-uploader.reprocess-faulty-datasets = false
# The extractor class to use for code extraction
quantml-uploader.data-set-info-extractor = ch.systemsx.cisd.yeastx.quant.QuantMLDataSetInfoExtractor
--
GitLab