From 2575ed701fa1a8a6c72f6d78570d2cb13d1c87e0 Mon Sep 17 00:00:00 2001
From: barillac <barillac>
Date: Mon, 7 Jul 2014 08:55:07 +0000
Subject: [PATCH] D-BIOL labs profiles added
SVN: 31899
---
.../1/as/webapps/newbrowser/html/index.html | 3 +
.../html/js/config/KrekLabProfile.js | 116 ++++++++++++++++++
.../html/js/config/PeterLabProfile.js | 116 ++++++++++++++++++
.../html/js/config/StoffelLabProfile.js | 116 ++++++++++++++++++
4 files changed, 351 insertions(+)
create mode 100644 plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/KrekLabProfile.js
create mode 100644 plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/PeterLabProfile.js
create mode 100644 plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/StoffelLabProfile.js
diff --git a/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/index.html b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/index.html
index d39620eb647..96b7fff485b 100644
--- a/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/index.html
+++ b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/index.html
@@ -71,6 +71,9 @@
<script type="text/javascript" src="./js/config/CaterinaTestProfile.js"></script>
<script type="text/javascript" src="./js/config/YeastLabProfile.js"></script>
<script type="text/javascript" src="./js/config/LimsProfile.js"></script>
+ <script type="text/javascript" src="./js/config/KrekLabProfile.js"></script>
+ <script type="text/javascript" src="./js/config/StoffelLabProfile.js"></script>
+ <script type="text/javascript" src="./js/config/PeterLabProfile.js"></script>
<script type="text/javascript" src="./js/server/ServerFacade.js"></script>
diff --git a/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/KrekLabProfile.js b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/KrekLabProfile.js
new file mode 100644
index 00000000000..591bd9b45ed
--- /dev/null
+++ b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/KrekLabProfile.js
@@ -0,0 +1,116 @@
+
+function KrekLabProfile(serverFacade) {
+ this.init(serverFacade);
+}
+
+$.extend(KrekLabProfile.prototype, DefaultProfile.prototype, {
+ init: function(serverFacade){
+ DefaultProfile.prototype.init.call(this, serverFacade);
+
+
+ //Use this with all known types to create groups, if a type is not specified by default will be added to the OTHERS group.
+ this.typeGroups = {
+ "MATERIALS" : {
+ "TYPE" : "MATERIALS",
+ "DISPLAY_NAME" : "Materials",
+ "LIST" : ["INHIBITOR"]
+ },
+ "SAMPLES" : {
+ "TYPE" : "SAMPLES",
+ "DISPLAY_NAME" : "Samples",
+ "LIST" : ["CELL_LINE", "ANTIBODY", "PLASMID"]
+ },
+ "METHODS" : {
+ "TYPE" : "METHODS",
+ "DISPLAY_NAME" : "Protocols",
+ "LIST" : ["PROTOCOL"]
+ },
+ "OTHERS" : {
+ "TYPE" : "OTHERS",
+ "DISPLAY_NAME" : "Others",
+ "LIST" : []
+ }
+ };
+
+ this.inventorySpaces = ["INVENTORY"];
+
+
+ this.storagesConfiguration = {
+ "isEnabled" : true,
+ /*
+ * Should be the same across all storages, if not correct behaviour is not guaranteed.
+ */
+ "STORAGE_PROPERTIES": [{
+ "STORAGE_PROPERTY_GROUP" : "Storage", //Where the storage will be painted.
+ "STORAGE_GROUP_DISPLAY_NAME" : "Storage Group 1", //Storage Group Name
+ "NAME_PROPERTY" : "FREEZER_NAME", //Should be a Vocabulary.
+ "ROW_PROPERTY" : "ROW", //Should be an integer.
+ "COLUMN_PROPERTY" : "COLUMN", //Should be an integer.
+ "BOX_PROPERTY" : "BOX_NUMBER", //Should be text.
+ "USER_PROPERTY" : "USER_PROPERTY" //Should be text.
+ }],
+ /*
+ * Storages map, can hold configurations for several storages.
+ */
+ "STORAGE_CONFIGS": {
+ "H20.1_KREK-1" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 5, //Number of rows
+ "COLUMN_NUM" : 4, //Number of columns
+ "BOX_NUM" : 9999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ },
+ "H20.2_KREK-2" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 5, //Number of rows
+ "COLUMN_NUM" : 4, //Number of columns
+ "BOX_NUM" : 9999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ },
+ "BENCH" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 1, //Number of rows
+ "COLUMN_NUM" : 1, //Number of columns
+ "BOX_NUM" : 99999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ }
+ }
+ };
+
+ /* New Sample definition tests*/
+ this.sampleTypeDefinitionsExtension = {
+ "PLASMID_EXPRESSION" : {
+ "SAMPLE_PARENTS_HINT" : [
+ {
+ "LABEL" : "Protocol",
+ "TYPE": "PROTOCOLS",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Plasmid",
+ "TYPE": "PLASMIDS",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Inhibitor",
+ "TYPE": "INHIBITORS",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Cell Line",
+ "TYPE": "CELL_LINE",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ],
+ }
+ }
+
+
+ //The properties you want to appear on the tables, if you don«t specify the list, all of them will appear by default.
+ this.typePropertiesForTable = {};
+
+ //The colors for the notes, if you don«t specify the color, light yellow will be used by default.
+ this.colorForInspectors = {};
+}
+});
\ No newline at end of file
diff --git a/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/PeterLabProfile.js b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/PeterLabProfile.js
new file mode 100644
index 00000000000..0b63d4178fa
--- /dev/null
+++ b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/PeterLabProfile.js
@@ -0,0 +1,116 @@
+
+function PeterLabProfile(serverFacade) {
+ this.init(serverFacade);
+}
+
+$.extend(PeterLabProfile.prototype, DefaultProfile.prototype, {
+ init: function(serverFacade){
+ DefaultProfile.prototype.init.call(this, serverFacade);
+
+
+ //Use this with all known types to create groups, if a type is not specified by default will be added to the OTHERS group.
+ this.typeGroups = {
+ "MATERIALS" : {
+ "TYPE" : "MATERIALS",
+ "DISPLAY_NAME" : "Materials",
+ "LIST" : ["INHIBITOR"]
+ },
+ "SAMPLES" : {
+ "TYPE" : "SAMPLES",
+ "DISPLAY_NAME" : "Samples",
+ "LIST" : ["CELL_LINE", "ANTIBODY", "PLASMID"]
+ },
+ "METHODS" : {
+ "TYPE" : "METHODS",
+ "DISPLAY_NAME" : "Protocols",
+ "LIST" : ["PROTOCOL"]
+ },
+ "OTHERS" : {
+ "TYPE" : "OTHERS",
+ "DISPLAY_NAME" : "Others",
+ "LIST" : []
+ }
+ };
+
+ this.inventorySpaces = ["INVENTORY"];
+
+
+ this.storagesConfiguration = {
+ "isEnabled" : true,
+ /*
+ * Should be the same across all storages, if not correct behaviour is not guaranteed.
+ */
+ "STORAGE_PROPERTIES": [{
+ "STORAGE_PROPERTY_GROUP" : "Storage", //Where the storage will be painted.
+ "STORAGE_GROUP_DISPLAY_NAME" : "Storage Group 1", //Storage Group Name
+ "NAME_PROPERTY" : "FREEZER_NAME", //Should be a Vocabulary.
+ "ROW_PROPERTY" : "ROW", //Should be an integer.
+ "COLUMN_PROPERTY" : "COLUMN", //Should be an integer.
+ "BOX_PROPERTY" : "BOX_NUMBER", //Should be text.
+ "USER_PROPERTY" : "USER_PROPERTY" //Should be text.
+ }],
+ /*
+ * Storages map, can hold configurations for several storages.
+ */
+ "STORAGE_CONFIGS": {
+ "H20.1_KREK-1" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 5, //Number of rows
+ "COLUMN_NUM" : 4, //Number of columns
+ "BOX_NUM" : 9999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ },
+ "H20.2_KREK-2" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 5, //Number of rows
+ "COLUMN_NUM" : 4, //Number of columns
+ "BOX_NUM" : 9999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ },
+ "BENCH" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 1, //Number of rows
+ "COLUMN_NUM" : 1, //Number of columns
+ "BOX_NUM" : 99999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ }
+ }
+ };
+
+ /* New Sample definition tests*/
+ this.sampleTypeDefinitionsExtension = {
+ "PLASMID_EXPRESSION" : {
+ "SAMPLE_PARENTS_HINT" : [
+ {
+ "LABEL" : "Protocol",
+ "TYPE": "PROTOCOL",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Plasmid",
+ "TYPE": "PLASMID",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Inhibitor",
+ "TYPE": "INHIBITOR",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Cell Line",
+ "TYPE": "CELL_LINE",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ],
+ }
+ }
+
+
+ //The properties you want to appear on the tables, if you don«t specify the list, all of them will appear by default.
+ this.typePropertiesForTable = {};
+
+ //The colors for the notes, if you don«t specify the color, light yellow will be used by default.
+ this.colorForInspectors = {};
+}
+});
\ No newline at end of file
diff --git a/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/StoffelLabProfile.js b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/StoffelLabProfile.js
new file mode 100644
index 00000000000..96eceb665a5
--- /dev/null
+++ b/plasmid/source/core-plugins/newbrowser/1/as/webapps/newbrowser/html/js/config/StoffelLabProfile.js
@@ -0,0 +1,116 @@
+
+function StoffelLabProfile(serverFacade) {
+ this.init(serverFacade);
+}
+
+$.extend(StoffelLabProfile.prototype, DefaultProfile.prototype, {
+ init: function(serverFacade){
+ DefaultProfile.prototype.init.call(this, serverFacade);
+
+
+ //Use this with all known types to create groups, if a type is not specified by default will be added to the OTHERS group.
+ this.typeGroups = {
+ "MATERIALS" : {
+ "TYPE" : "MATERIALS",
+ "DISPLAY_NAME" : "Materials",
+ "LIST" : ["INHIBITOR"]
+ },
+ "SAMPLES" : {
+ "TYPE" : "SAMPLES",
+ "DISPLAY_NAME" : "Samples",
+ "LIST" : ["CELL_LINE", "ANTIBODY", "PLASMID"]
+ },
+ "METHODS" : {
+ "TYPE" : "METHODS",
+ "DISPLAY_NAME" : "Protocols",
+ "LIST" : ["PROTOCOL"]
+ },
+ "OTHERS" : {
+ "TYPE" : "OTHERS",
+ "DISPLAY_NAME" : "Others",
+ "LIST" : []
+ }
+ };
+
+ this.inventorySpaces = ["INVENTORY"];
+
+
+ this.storagesConfiguration = {
+ "isEnabled" : true,
+ /*
+ * Should be the same across all storages, if not correct behaviour is not guaranteed.
+ */
+ "STORAGE_PROPERTIES": [{
+ "STORAGE_PROPERTY_GROUP" : "Storage", //Where the storage will be painted.
+ "STORAGE_GROUP_DISPLAY_NAME" : "Storage Group 1", //Storage Group Name
+ "NAME_PROPERTY" : "FREEZER_NAME", //Should be a Vocabulary.
+ "ROW_PROPERTY" : "ROW", //Should be an integer.
+ "COLUMN_PROPERTY" : "COLUMN", //Should be an integer.
+ "BOX_PROPERTY" : "BOX_NUMBER", //Should be text.
+ "USER_PROPERTY" : "USER_PROPERTY" //Should be text.
+ }],
+ /*
+ * Storages map, can hold configurations for several storages.
+ */
+ "STORAGE_CONFIGS": {
+ "H20.1_KREK-1" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 5, //Number of rows
+ "COLUMN_NUM" : 4, //Number of columns
+ "BOX_NUM" : 9999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ },
+ "H20.2_KREK-2" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 5, //Number of rows
+ "COLUMN_NUM" : 4, //Number of columns
+ "BOX_NUM" : 9999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ },
+ "BENCH" : { //Freezer name given by the NAME_PROPERTY
+ "ROW_NUM" : 1, //Number of rows
+ "COLUMN_NUM" : 1, //Number of columns
+ "BOX_NUM" : 99999 //Boxes on each rack, used for validation, to avoid validation increase the number to 9999 for example
+ }
+ }
+ };
+
+ /* New Sample definition tests*/
+ this.sampleTypeDefinitionsExtension = {
+ "PLASMID_EXPRESSION" : {
+ "SAMPLE_PARENTS_HINT" : [
+ {
+ "LABEL" : "Protocol",
+ "TYPE": "PROTOCOL",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Plasmid",
+ "TYPE": "PLASMID",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Inhibitor",
+ "TYPE": "INHIBITOR",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ,
+ {
+ "LABEL" : "Cell Line",
+ "TYPE": "CELL_LINE",
+ "MIN_COUNT" : 1,
+ "ANNOTATION_PROPERTIES" : []
+ }
+ ],
+ }
+ }
+
+
+ //The properties you want to appear on the tables, if you don«t specify the list, all of them will appear by default.
+ this.typePropertiesForTable = {};
+
+ //The colors for the notes, if you don«t specify the color, light yellow will be used by default.
+ this.colorForInspectors = {};
+}
+});
\ No newline at end of file
--
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