diff --git a/integration-tests/templates/data-ibrain2/dropboxes/scripts/hcs_image_raw.py b/integration-tests/templates/data-ibrain2/dropboxes/scripts/hcs_image_raw.py index 5dd8e3ac9946a7106f39dab2ef8b825847ff41e4..7f639112fd6f4d796abde8edf83fefb706a4762a 100755 --- a/integration-tests/templates/data-ibrain2/dropboxes/scripts/hcs_image_raw.py +++ b/integration-tests/templates/data-ibrain2/dropboxes/scripts/hcs_image_raw.py @@ -18,14 +18,14 @@ def createPlateWithExperimentIfNeeded(transaction, assayParser, plateCode, space experimentType = assayParser.get(assayParser.ASSAY_TYPE_PROPERTY) if transaction.getSpace(spaceCode) == None: - tr.createNewSpace(spaceCode, None) + transaction.createNewSpace(spaceCode, None) sampleIdentifier = "/"+spaceCode+"/"+plateCode - plateCode = transaction.getSample(sampleIdentifier) - if plateCode == None: + plate = transaction.getSample(sampleIdentifier) + if plate == None: projectIdent = "/" + spaceCode +"/" + projectCode if transaction.getProject(projectIdent) == None: - tr.createNewProject(projectIdent) + transaction.createNewProject(projectIdent) expIdentifier = projectIdent + "/"+experiment experiment = transaction.getExperiment(expIdentifier) if experiment == None: @@ -33,10 +33,10 @@ def createPlateWithExperimentIfNeeded(transaction, assayParser, plateCode, space openbisExpDesc = experimentDesc + " (type: "+experimentType + ")" experiment.setPropertyValue("DESCRIPTION", openbisExpDesc) - plateCode = transaction.createNewSample(sampleIdentifier, PLATE_TYPE_CODE) - plateCode.setPropertyValue(PLATE_GEOMETRY_PROPERTY_CODE, plateGeometry) - plateCode.setExperiment(experiment) - return plateCode + plate = transaction.createNewSample(sampleIdentifier, PLATE_TYPE_CODE) + plate.setPropertyValue(PLATE_GEOMETRY_PROPERTY_CODE, plateGeometry) + plate.setExperiment(experiment) + return plate iBrain2DatasetId = None