diff --git a/screening/source/java/ch/systemsx/cisd/openbis/dss/etl/dataaccess/HCSDatasetLoader.java b/screening/source/java/ch/systemsx/cisd/openbis/dss/etl/dataaccess/HCSDatasetLoader.java index a03411c3a2b433652d6d3bed27fdf3ec234c3ef5..089eb3fd30cafeabaad4e4e405897faa499adaec 100644 --- a/screening/source/java/ch/systemsx/cisd/openbis/dss/etl/dataaccess/HCSDatasetLoader.java +++ b/screening/source/java/ch/systemsx/cisd/openbis/dss/etl/dataaccess/HCSDatasetLoader.java @@ -124,7 +124,7 @@ public class HCSDatasetLoader implements IHCSDatasetLoader assert wellLocation.getX() <= getContainer().getNumberOfColumns(); assert wellLocation.getY() <= getContainer().getNumberOfRows(); - long chosenChannelId = // FIXME Jun 15, 2010, IA: tests + long chosenChannelId = query.getChannelIdByChannelNameDatasetIdOrExperimentId(getDataset().getId(), getContainer().getExperimentId(), chosenChannel); @@ -143,8 +143,8 @@ public class HCSDatasetLoader implements IHCSDatasetLoader if (imageDTO != null) { content = - new ThumbnailContent(contentRepository.getContent(imageDTO.getFilePath()), - thumbnailSizeOrNull); + new ThumbnailContent(contentRepository.getContent(imageDTO + .getFilePath()), thumbnailSizeOrNull); } } else { diff --git a/screening/sourceTest/java/ch/systemsx/cisd/openbis/dss/etl/dataaccess/ImagingUploadDAOTest.java b/screening/sourceTest/java/ch/systemsx/cisd/openbis/dss/etl/dataaccess/ImagingUploadDAOTest.java index a64bccc760f1e001017ff3f5471fbb454663dbe0..12bf8626e3b812fbee37b7f374e8cc285d2ea030 100644 --- a/screening/sourceTest/java/ch/systemsx/cisd/openbis/dss/etl/dataaccess/ImagingUploadDAOTest.java +++ b/screening/sourceTest/java/ch/systemsx/cisd/openbis/dss/etl/dataaccess/ImagingUploadDAOTest.java @@ -138,6 +138,10 @@ public class ImagingUploadDAOTest extends AbstractDBTest AssertJUnit.assertTrue(channels[0] == channelId1 && channels[1] == channelId2 || channels[1] == channelId1 && channels[0] == channelId2); + // test get id of first channel + assertEquals(channels[0], dao.getChannelIdByChannelNameDatasetIdOrExperimentId(datasetId, + experimentId, "dsChannel")); + List<ImgChannelDTO> experimentChannels = dao.getChannelsByExperimentId(experimentId); assertEquals(1, experimentChannels.size());